Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3863 and Ac3H11_3864 are separated by 87 nucleotides Ac3H11_3864 and Ac3H11_3865 are separated by 219 nucleotides
Ac3H11_3863 - Transcriptional activator protein LysR, at 80,851 to 81,798
_3863
Ac3H11_3864 - Phosphopantetheine adenylyltransferase (EC 2.7.7.3), at 81,886 to 82,389
_3864
Ac3H11_3865 - hypothetical protein, at 82,609 to 83,403
_3865
Position (kb)
81
82
83 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 81.374 kb on + strand, within Ac3H11_3863 at 81.374 kb on + strand, within Ac3H11_3863 at 81.374 kb on + strand, within Ac3H11_3863 at 81.454 kb on + strand, within Ac3H11_3863 at 81.703 kb on + strand, within Ac3H11_3863 at 81.797 kb on - strand at 81.808 kb on - strand at 81.810 kb on - strand at 81.810 kb on - strand at 81.815 kb on + strand at 81.815 kb on + strand at 81.816 kb on - strand at 82.479 kb on - strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.497 kb on + strand at 82.498 kb on - strand at 82.498 kb on - strand at 82.498 kb on - strand at 82.498 kb on - strand at 82.498 kb on - strand at 82.498 kb on - strand at 82.498 kb on - strand at 82.568 kb on + strand at 82.568 kb on + strand at 82.597 kb on + strand at 82.597 kb on + strand at 82.597 kb on + strand at 82.598 kb on - strand at 82.598 kb on - strand at 82.598 kb on - strand at 82.598 kb on - strand at 82.598 kb on - strand at 82.598 kb on - strand at 82.598 kb on - strand at 82.642 kb on + strand at 82.642 kb on + strand at 82.642 kb on + strand at 82.852 kb on + strand, within Ac3H11_3865 at 82.852 kb on + strand, within Ac3H11_3865 at 82.852 kb on + strand, within Ac3H11_3865 at 82.852 kb on + strand, within Ac3H11_3865 at 82.852 kb on + strand, within Ac3H11_3865 at 82.852 kb on + strand, within Ac3H11_3865 at 82.853 kb on - strand, within Ac3H11_3865 at 82.946 kb on - strand, within Ac3H11_3865 at 82.946 kb on - strand, within Ac3H11_3865 at 82.946 kb on - strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.987 kb on + strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 82.988 kb on - strand, within Ac3H11_3865 at 83.080 kb on + strand, within Ac3H11_3865 at 83.080 kb on + strand, within Ac3H11_3865 at 83.081 kb on - strand, within Ac3H11_3865 at 83.113 kb on + strand, within Ac3H11_3865 at 83.114 kb on - strand, within Ac3H11_3865 at 83.114 kb on - strand, within Ac3H11_3865 at 83.218 kb on + strand, within Ac3H11_3865 at 83.218 kb on + strand, within Ac3H11_3865 at 83.218 kb on + strand, within Ac3H11_3865 at 83.218 kb on + strand, within Ac3H11_3865 at 83.219 kb on - strand, within Ac3H11_3865 at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.356 kb on + strand at 83.357 kb on - strand at 83.357 kb on - strand at 83.357 kb on - strand at 83.357 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 81,374 + Ac3H11_3863 0.55 -0.3 81,374 + Ac3H11_3863 0.55 -1.5 81,374 + Ac3H11_3863 0.55 -1.3 81,454 + Ac3H11_3863 0.64 -0.4 81,703 + Ac3H11_3863 0.90 +0.6 81,797 - +0.4 81,808 - -0.6 81,810 - +0.1 81,810 - -2.4 81,815 + +0.9 81,815 + -0.7 81,816 - -1.1 82,479 - -0.4 82,497 + +0.1 82,497 + +0.4 82,497 + +1.7 82,497 + -0.4 82,497 + +0.3 82,497 + +1.2 82,497 + +0.2 82,497 + -1.2 82,497 + +0.4 82,498 - -2.2 82,498 - -1.7 82,498 - +1.3 82,498 - +1.6 82,498 - -0.2 82,498 - +1.3 82,498 - +0.3 82,568 + +1.2 82,568 + +0.8 82,597 + +2.2 82,597 + -1.0 82,597 + +0.6 82,598 - -0.1 82,598 - -0.1 82,598 - -0.3 82,598 - +1.0 82,598 - +0.1 82,598 - -0.8 82,598 - -2.2 82,642 + +0.2 82,642 + +0.3 82,642 + -0.5 82,852 + Ac3H11_3865 0.31 -0.2 82,852 + Ac3H11_3865 0.31 +1.1 82,852 + Ac3H11_3865 0.31 -4.0 82,852 + Ac3H11_3865 0.31 -0.4 82,852 + Ac3H11_3865 0.31 -0.6 82,852 + Ac3H11_3865 0.31 +0.9 82,853 - Ac3H11_3865 0.31 +0.6 82,946 - Ac3H11_3865 0.42 -0.7 82,946 - Ac3H11_3865 0.42 -3.4 82,946 - Ac3H11_3865 0.42 +0.9 82,987 + Ac3H11_3865 0.48 -1.6 82,987 + Ac3H11_3865 0.48 -1.5 82,987 + Ac3H11_3865 0.48 +0.4 82,987 + Ac3H11_3865 0.48 +0.3 82,987 + Ac3H11_3865 0.48 -0.8 82,987 + Ac3H11_3865 0.48 +0.9 82,987 + Ac3H11_3865 0.48 +0.2 82,987 + Ac3H11_3865 0.48 -1.5 82,987 + Ac3H11_3865 0.48 -1.2 82,987 + Ac3H11_3865 0.48 +1.3 82,987 + Ac3H11_3865 0.48 +0.6 82,987 + Ac3H11_3865 0.48 +2.8 82,987 + Ac3H11_3865 0.48 -1.7 82,987 + Ac3H11_3865 0.48 -1.9 82,987 + Ac3H11_3865 0.48 +1.3 82,987 + Ac3H11_3865 0.48 -1.7 82,987 + Ac3H11_3865 0.48 -1.4 82,987 + Ac3H11_3865 0.48 +1.2 82,987 + Ac3H11_3865 0.48 -0.2 82,987 + Ac3H11_3865 0.48 +1.0 82,987 + Ac3H11_3865 0.48 -3.3 82,987 + Ac3H11_3865 0.48 -0.6 82,987 + Ac3H11_3865 0.48 +0.2 82,987 + Ac3H11_3865 0.48 +0.7 82,987 + Ac3H11_3865 0.48 +1.6 82,987 + Ac3H11_3865 0.48 -0.2 82,987 + Ac3H11_3865 0.48 -0.9 82,988 - Ac3H11_3865 0.48 -0.9 82,988 - Ac3H11_3865 0.48 -0.5 82,988 - Ac3H11_3865 0.48 -0.3 82,988 - Ac3H11_3865 0.48 +0.3 82,988 - Ac3H11_3865 0.48 -0.7 82,988 - Ac3H11_3865 0.48 -0.2 82,988 - Ac3H11_3865 0.48 -0.1 82,988 - Ac3H11_3865 0.48 +0.4 82,988 - Ac3H11_3865 0.48 +1.0 82,988 - Ac3H11_3865 0.48 -0.6 82,988 - Ac3H11_3865 0.48 -0.1 82,988 - Ac3H11_3865 0.48 +0.2 82,988 - Ac3H11_3865 0.48 +1.2 82,988 - Ac3H11_3865 0.48 -0.8 82,988 - Ac3H11_3865 0.48 -0.5 82,988 - Ac3H11_3865 0.48 -1.2 82,988 - Ac3H11_3865 0.48 +1.7 82,988 - Ac3H11_3865 0.48 +0.4 82,988 - Ac3H11_3865 0.48 -0.2 83,080 + Ac3H11_3865 0.59 +0.8 83,080 + Ac3H11_3865 0.59 -1.3 83,081 - Ac3H11_3865 0.59 +0.3 83,113 + Ac3H11_3865 0.63 +0.6 83,114 - Ac3H11_3865 0.64 -3.2 83,114 - Ac3H11_3865 0.64 +0.7 83,218 + Ac3H11_3865 0.77 +0.3 83,218 + Ac3H11_3865 0.77 +1.5 83,218 + Ac3H11_3865 0.77 -0.0 83,218 + Ac3H11_3865 0.77 +1.0 83,219 - Ac3H11_3865 0.77 -1.5 83,356 + +0.7 83,356 + +0.1 83,356 + +0.9 83,356 + +0.3 83,356 + +0.4 83,356 + -1.6 83,356 + +1.6 83,356 + +1.1 83,356 + +0.7 83,356 + -1.2 83,356 + +0.2 83,357 - -2.3 83,357 - +0.2 83,357 - +0.1 83,357 - -0.6
Or see this region's nucleotide sequence