Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3611 and Ac3H11_3612 are separated by 10 nucleotides Ac3H11_3612 and Ac3H11_3613 overlap by 4 nucleotides
Ac3H11_3611 - Monooxygenase, flavin-binding family, at 163,462 to 164,796
_3611
Ac3H11_3612 - Na(+) dependent transporter,Sodium Bile acid symporter family, at 164,807 to 165,742
_3612
Ac3H11_3613 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 165,739 to 166,749
_3613
Position (kb) 164
165
166 Strain fitness (log2 ratio) -2
-1
0
1
2 at 163.997 kb on - strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.086 kb on + strand, within Ac3H11_3611 at 164.087 kb on - strand, within Ac3H11_3611 at 164.122 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.125 kb on + strand, within Ac3H11_3611 at 164.126 kb on - strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.140 kb on + strand, within Ac3H11_3611 at 164.141 kb on - strand, within Ac3H11_3611 at 164.141 kb on - strand at 164.141 kb on - strand, within Ac3H11_3611 at 164.276 kb on - strand, within Ac3H11_3611 at 164.284 kb on + strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.285 kb on - strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.413 kb on + strand, within Ac3H11_3611 at 164.414 kb on - strand, within Ac3H11_3611 at 164.441 kb on - strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.452 kb on + strand, within Ac3H11_3611 at 164.453 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.507 kb on - strand, within Ac3H11_3611 at 164.591 kb on - strand, within Ac3H11_3611 at 164.711 kb on - strand at 164.734 kb on + strand at 164.735 kb on - strand at 164.737 kb on + strand at 164.737 kb on + strand at 164.737 kb on + strand at 164.738 kb on - strand at 164.738 kb on - strand at 164.756 kb on - strand at 164.826 kb on + strand at 164.826 kb on + strand at 164.827 kb on - strand at 165.036 kb on + strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.037 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.432 kb on - strand, within Ac3H11_3612 at 165.525 kb on - strand, within Ac3H11_3612 at 165.901 kb on + strand, within Ac3H11_3613 at 165.902 kb on - strand, within Ac3H11_3613 at 166.024 kb on + strand, within Ac3H11_3613 at 166.189 kb on + strand, within Ac3H11_3613
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 163,997 - Ac3H11_3611 0.40 +0.6 164,086 + Ac3H11_3611 0.47 +0.6 164,086 + Ac3H11_3611 0.47 -0.0 164,087 - Ac3H11_3611 0.47 -2.7 164,122 + Ac3H11_3611 0.49 +0.9 164,125 + Ac3H11_3611 0.50 -1.0 164,125 + Ac3H11_3611 0.50 -0.5 164,125 + Ac3H11_3611 0.50 +0.5 164,125 + Ac3H11_3611 0.50 +0.3 164,125 + Ac3H11_3611 0.50 +0.3 164,126 - Ac3H11_3611 0.50 +0.8 164,140 + Ac3H11_3611 0.51 +0.1 164,140 + Ac3H11_3611 0.51 +1.9 164,140 + Ac3H11_3611 0.51 -1.3 164,140 + Ac3H11_3611 0.51 +0.5 164,140 + Ac3H11_3611 0.51 -2.4 164,140 + Ac3H11_3611 0.51 -1.5 164,141 - Ac3H11_3611 0.51 -0.8 164,141 - -0.3 164,141 - Ac3H11_3611 0.51 -0.7 164,276 - Ac3H11_3611 0.61 -1.3 164,284 + Ac3H11_3611 0.62 -0.0 164,285 - Ac3H11_3611 0.62 +0.2 164,285 - Ac3H11_3611 0.62 +0.5 164,285 - Ac3H11_3611 0.62 -1.4 164,285 - Ac3H11_3611 0.62 +1.9 164,413 + Ac3H11_3611 0.71 +0.2 164,413 + Ac3H11_3611 0.71 +0.6 164,414 - Ac3H11_3611 0.71 +0.7 164,441 - Ac3H11_3611 0.73 +1.3 164,452 + Ac3H11_3611 0.74 -0.1 164,452 + Ac3H11_3611 0.74 +0.3 164,453 - Ac3H11_3611 0.74 +0.6 164,507 - Ac3H11_3611 0.78 +0.5 164,507 - Ac3H11_3611 0.78 +0.1 164,507 - Ac3H11_3611 0.78 -0.0 164,591 - Ac3H11_3611 0.85 +1.1 164,711 - +1.8 164,734 + +0.3 164,735 - +0.4 164,737 + +0.8 164,737 + -0.8 164,737 + +0.8 164,738 - +0.3 164,738 - -0.5 164,756 - +0.3 164,826 + -1.4 164,826 + +0.1 164,827 - -1.6 165,036 + Ac3H11_3612 0.24 +0.4 165,037 - Ac3H11_3612 0.25 -0.4 165,037 - Ac3H11_3612 0.25 -2.4 165,037 - Ac3H11_3612 0.25 -0.1 165,432 - Ac3H11_3612 0.67 -0.3 165,432 - Ac3H11_3612 0.67 -1.6 165,432 - Ac3H11_3612 0.67 +0.9 165,432 - Ac3H11_3612 0.67 +2.1 165,525 - Ac3H11_3612 0.77 -1.3 165,901 + Ac3H11_3613 0.16 -0.0 165,902 - Ac3H11_3613 0.16 -0.3 166,024 + Ac3H11_3613 0.28 +1.2 166,189 + Ac3H11_3613 0.45 +0.7
Or see this region's nucleotide sequence