Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3442 and Ac3H11_3443 overlap by 4 nucleotides Ac3H11_3443 and Ac3H11_3444 are separated by 89 nucleotides Ac3H11_3444 and Ac3H11_3445 are separated by 303 nucleotides
Ac3H11_3442 - Outer membrane lipoprotein, at 125,395 to 126,198
_3442
Ac3H11_3443 - hypothetical protein, at 126,195 to 126,407
_3443
Ac3H11_3444 - Ribonuclease BN (EC 3.1.-.-), at 126,497 to 127,495
_3444
Ac3H11_3445 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 127,799 to 128,572
_3445
Position (kb)
126
127
128 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 125.582 kb on + strand, within Ac3H11_3442 at 125.582 kb on + strand, within Ac3H11_3442 at 125.582 kb on + strand, within Ac3H11_3442 at 125.582 kb on + strand, within Ac3H11_3442 at 125.583 kb on - strand, within Ac3H11_3442 at 125.583 kb on - strand, within Ac3H11_3442 at 125.627 kb on + strand, within Ac3H11_3442 at 125.627 kb on + strand, within Ac3H11_3442 at 125.627 kb on + strand, within Ac3H11_3442 at 125.627 kb on + strand, within Ac3H11_3442 at 125.627 kb on + strand, within Ac3H11_3442 at 125.628 kb on - strand, within Ac3H11_3442 at 125.628 kb on - strand, within Ac3H11_3442 at 125.911 kb on - strand, within Ac3H11_3442 at 125.933 kb on - strand, within Ac3H11_3442 at 125.933 kb on - strand, within Ac3H11_3442 at 125.933 kb on - strand at 126.145 kb on + strand at 126.186 kb on + strand at 126.186 kb on + strand at 126.186 kb on + strand at 126.186 kb on + strand at 126.187 kb on - strand at 126.187 kb on - strand at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.227 kb on + strand, within Ac3H11_3443 at 126.228 kb on - strand, within Ac3H11_3443 at 126.228 kb on - strand, within Ac3H11_3443 at 126.228 kb on - strand, within Ac3H11_3443 at 126.228 kb on - strand, within Ac3H11_3443 at 126.295 kb on + strand, within Ac3H11_3443 at 126.296 kb on - strand, within Ac3H11_3443 at 126.296 kb on - strand, within Ac3H11_3443 at 126.330 kb on + strand, within Ac3H11_3443 at 126.341 kb on - strand, within Ac3H11_3443 at 126.350 kb on + strand, within Ac3H11_3443 at 126.351 kb on - strand, within Ac3H11_3443 at 126.390 kb on + strand at 126.390 kb on + strand at 126.391 kb on - strand at 126.498 kb on + strand at 126.498 kb on + strand at 126.498 kb on + strand at 126.498 kb on + strand at 126.499 kb on - strand at 126.499 kb on - strand at 126.499 kb on - strand at 126.675 kb on + strand, within Ac3H11_3444 at 126.675 kb on + strand, within Ac3H11_3444 at 126.676 kb on - strand, within Ac3H11_3444 at 126.676 kb on - strand, within Ac3H11_3444 at 126.676 kb on - strand, within Ac3H11_3444 at 126.706 kb on - strand, within Ac3H11_3444 at 126.706 kb on - strand, within Ac3H11_3444 at 126.706 kb on - strand, within Ac3H11_3444 at 126.771 kb on + strand, within Ac3H11_3444 at 126.999 kb on + strand, within Ac3H11_3444 at 126.999 kb on + strand, within Ac3H11_3444 at 126.999 kb on + strand, within Ac3H11_3444 at 126.999 kb on + strand, within Ac3H11_3444 at 126.999 kb on + strand, within Ac3H11_3444 at 126.999 kb on + strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.000 kb on - strand, within Ac3H11_3444 at 127.063 kb on - strand, within Ac3H11_3444 at 127.063 kb on - strand, within Ac3H11_3444 at 127.063 kb on - strand, within Ac3H11_3444 at 127.270 kb on - strand, within Ac3H11_3444 at 127.270 kb on - strand, within Ac3H11_3444 at 127.342 kb on - strand, within Ac3H11_3444 at 127.507 kb on + strand at 127.507 kb on + strand at 127.508 kb on - strand at 127.624 kb on - strand at 127.644 kb on + strand at 127.644 kb on + strand at 127.644 kb on + strand at 127.645 kb on - strand at 127.645 kb on - strand at 127.645 kb on - strand at 127.645 kb on - strand at 127.645 kb on - strand at 128.117 kb on + strand, within Ac3H11_3445 at 128.288 kb on + strand, within Ac3H11_3445 at 128.288 kb on + strand, within Ac3H11_3445 at 128.288 kb on + strand, within Ac3H11_3445 at 128.289 kb on - strand, within Ac3H11_3445 at 128.289 kb on - strand, within Ac3H11_3445 at 128.289 kb on - strand, within Ac3H11_3445 at 128.289 kb on - strand, within Ac3H11_3445 at 128.351 kb on + strand, within Ac3H11_3445 at 128.352 kb on - strand, within Ac3H11_3445
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 125,582 + Ac3H11_3442 0.23 -3.2 125,582 + Ac3H11_3442 0.23 -2.7 125,582 + Ac3H11_3442 0.23 -3.5 125,582 + Ac3H11_3442 0.23 -2.3 125,583 - Ac3H11_3442 0.23 -2.6 125,583 - Ac3H11_3442 0.23 -3.9 125,627 + Ac3H11_3442 0.29 -3.8 125,627 + Ac3H11_3442 0.29 -2.8 125,627 + Ac3H11_3442 0.29 +1.2 125,627 + Ac3H11_3442 0.29 +1.2 125,627 + Ac3H11_3442 0.29 -1.2 125,628 - Ac3H11_3442 0.29 -0.2 125,628 - Ac3H11_3442 0.29 -0.1 125,911 - Ac3H11_3442 0.64 +0.5 125,933 - Ac3H11_3442 0.67 +1.5 125,933 - Ac3H11_3442 0.67 -3.5 125,933 - +3.4 126,145 + +0.1 126,186 + +0.4 126,186 + +1.0 126,186 + -1.1 126,186 + +1.4 126,187 - +0.7 126,187 - -2.1 126,227 + Ac3H11_3443 0.15 +0.9 126,227 + Ac3H11_3443 0.15 -3.0 126,227 + Ac3H11_3443 0.15 +0.3 126,227 + Ac3H11_3443 0.15 +0.7 126,227 + Ac3H11_3443 0.15 +0.6 126,227 + Ac3H11_3443 0.15 -1.7 126,227 + Ac3H11_3443 0.15 -1.5 126,227 + Ac3H11_3443 0.15 +0.1 126,227 + Ac3H11_3443 0.15 +1.3 126,227 + Ac3H11_3443 0.15 +1.1 126,227 + Ac3H11_3443 0.15 +0.3 126,228 - Ac3H11_3443 0.15 -1.2 126,228 - Ac3H11_3443 0.15 +0.2 126,228 - Ac3H11_3443 0.15 +2.2 126,228 - Ac3H11_3443 0.15 -0.1 126,295 + Ac3H11_3443 0.47 -0.2 126,296 - Ac3H11_3443 0.47 -1.1 126,296 - Ac3H11_3443 0.47 +2.2 126,330 + Ac3H11_3443 0.63 -0.9 126,341 - Ac3H11_3443 0.69 +1.2 126,350 + Ac3H11_3443 0.73 +0.6 126,351 - Ac3H11_3443 0.73 -1.0 126,390 + -0.6 126,390 + +0.1 126,391 - -0.1 126,498 + -0.2 126,498 + +0.5 126,498 + -0.3 126,498 + +0.7 126,499 - +0.0 126,499 - -0.3 126,499 - +2.1 126,675 + Ac3H11_3444 0.18 +3.0 126,675 + Ac3H11_3444 0.18 -0.5 126,676 - Ac3H11_3444 0.18 -0.6 126,676 - Ac3H11_3444 0.18 -2.1 126,676 - Ac3H11_3444 0.18 -0.9 126,706 - Ac3H11_3444 0.21 -0.3 126,706 - Ac3H11_3444 0.21 +1.8 126,706 - Ac3H11_3444 0.21 -0.4 126,771 + Ac3H11_3444 0.27 +0.9 126,999 + Ac3H11_3444 0.50 +0.1 126,999 + Ac3H11_3444 0.50 -0.2 126,999 + Ac3H11_3444 0.50 -0.4 126,999 + Ac3H11_3444 0.50 -0.9 126,999 + Ac3H11_3444 0.50 +1.9 126,999 + Ac3H11_3444 0.50 -0.1 127,000 - Ac3H11_3444 0.50 +0.1 127,000 - Ac3H11_3444 0.50 +0.3 127,000 - Ac3H11_3444 0.50 -0.3 127,000 - Ac3H11_3444 0.50 -0.5 127,000 - Ac3H11_3444 0.50 -0.3 127,000 - Ac3H11_3444 0.50 -0.3 127,000 - Ac3H11_3444 0.50 +1.3 127,000 - Ac3H11_3444 0.50 +1.6 127,000 - Ac3H11_3444 0.50 -1.0 127,063 - Ac3H11_3444 0.57 -0.2 127,063 - Ac3H11_3444 0.57 +1.1 127,063 - Ac3H11_3444 0.57 -1.6 127,270 - Ac3H11_3444 0.77 -0.6 127,270 - Ac3H11_3444 0.77 +0.5 127,342 - Ac3H11_3444 0.85 +1.8 127,507 + +1.3 127,507 + +2.7 127,508 - -0.8 127,624 - -3.1 127,644 + +0.3 127,644 + +0.7 127,644 + +1.4 127,645 - -1.3 127,645 - -0.1 127,645 - -0.5 127,645 - -0.8 127,645 - +1.8 128,117 + Ac3H11_3445 0.41 +1.1 128,288 + Ac3H11_3445 0.63 -0.4 128,288 + Ac3H11_3445 0.63 +1.2 128,288 + Ac3H11_3445 0.63 -1.6 128,289 - Ac3H11_3445 0.63 +1.1 128,289 - Ac3H11_3445 0.63 +0.6 128,289 - Ac3H11_3445 0.63 -1.8 128,289 - Ac3H11_3445 0.63 -0.7 128,351 + Ac3H11_3445 0.71 -0.8 128,352 - Ac3H11_3445 0.71 +0.4
Or see this region's nucleotide sequence