Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2389 and Ac3H11_2390 are separated by 35 nucleotides Ac3H11_2390 and Ac3H11_2391 are separated by 26 nucleotides Ac3H11_2391 and Ac3H11_2392 are separated by 89 nucleotides
Ac3H11_2389 - hypothetical protein, at 648,098 to 648,568
_2389
Ac3H11_2390 - putative membrane protein, at 648,604 to 649,023
_2390
Ac3H11_2391 - L-asparaginase (EC 3.5.1.1), at 649,050 to 650,003
_2391
Ac3H11_2392 - SOS-response repressor and protease LexA (EC 3.4.21.88), at 650,093 to 650,779
_2392
Position (kb) 649
650
651 Strain fitness (log2 ratio) -2
-1
0
1
2 at 648.073 kb on + strand at 648.073 kb on + strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.074 kb on - strand at 648.075 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.123 kb on + strand at 648.124 kb on - strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.141 kb on + strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.142 kb on - strand at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.147 kb on + strand, within Ac3H11_2389 at 648.148 kb on - strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.465 kb on + strand, within Ac3H11_2389 at 648.466 kb on - strand, within Ac3H11_2389 at 648.568 kb on + strand at 648.568 kb on + strand at 648.568 kb on + strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.569 kb on - strand at 648.606 kb on - strand at 648.606 kb on - strand at 648.611 kb on + strand at 648.612 kb on - strand at 648.612 kb on - strand at 648.989 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.023 kb on + strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.024 kb on - strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.029 kb on + strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.030 kb on - strand at 649.033 kb on + strand at 649.033 kb on + strand at 649.033 kb on + strand at 649.034 kb on - strand at 649.034 kb on - strand at 649.377 kb on - strand, within Ac3H11_2391 at 649.382 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.899 kb on + strand, within Ac3H11_2391 at 649.900 kb on - strand, within Ac3H11_2391 at 649.900 kb on - strand, within Ac3H11_2391 at 649.921 kb on + strand at 649.922 kb on - strand at 649.953 kb on - strand at 650.009 kb on + strand at 650.010 kb on - strand at 650.010 kb on - strand at 650.069 kb on + strand at 650.341 kb on + strand, within Ac3H11_2392 at 650.341 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.465 kb on + strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.466 kb on - strand, within Ac3H11_2392 at 650.504 kb on + strand, within Ac3H11_2392 at 650.504 kb on + strand, within Ac3H11_2392 at 650.504 kb on + strand, within Ac3H11_2392 at 650.505 kb on - strand, within Ac3H11_2392 at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.777 kb on + strand at 650.778 kb on - strand at 650.778 kb on - strand at 650.778 kb on - strand at 650.778 kb on - strand at 650.830 kb on + strand at 650.831 kb on - strand at 650.831 kb on - strand at 650.831 kb on - strand at 650.880 kb on - strand at 650.880 kb on - strand at 651.000 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 648,073 + +0.3 648,073 + -1.9 648,074 - -0.8 648,074 - +0.7 648,074 - -0.5 648,075 + -1.7 648,123 + +1.3 648,123 + +0.4 648,123 + -0.2 648,124 - +1.0 648,141 + +0.6 648,141 + +0.0 648,141 + +0.4 648,141 + +1.0 648,141 + +1.0 648,141 + -0.1 648,141 + +2.6 648,141 + +1.5 648,141 + +1.0 648,141 + +0.8 648,141 + -0.9 648,141 + +0.7 648,141 + +0.4 648,141 + -0.7 648,141 + +0.6 648,141 + +0.7 648,142 - +1.7 648,142 - +0.8 648,142 - +0.4 648,142 - -0.7 648,142 - +0.6 648,142 - +0.6 648,142 - +0.3 648,142 - -0.1 648,142 - -0.5 648,142 - -1.6 648,142 - +0.2 648,142 - +0.8 648,142 - -2.0 648,142 - -0.5 648,147 + Ac3H11_2389 0.10 +0.3 648,147 + Ac3H11_2389 0.10 +1.3 648,147 + Ac3H11_2389 0.10 +0.5 648,147 + Ac3H11_2389 0.10 +0.0 648,148 - Ac3H11_2389 0.11 -1.2 648,465 + Ac3H11_2389 0.78 -0.1 648,465 + Ac3H11_2389 0.78 +1.0 648,465 + Ac3H11_2389 0.78 +0.6 648,465 + Ac3H11_2389 0.78 -0.5 648,465 + Ac3H11_2389 0.78 +1.3 648,465 + Ac3H11_2389 0.78 +0.7 648,465 + Ac3H11_2389 0.78 -2.3 648,465 + Ac3H11_2389 0.78 +0.8 648,466 - Ac3H11_2389 0.78 -0.9 648,568 + -0.7 648,568 + +2.0 648,568 + +0.3 648,569 - -0.6 648,569 - -0.8 648,569 - -1.5 648,569 - -1.3 648,569 - +0.1 648,606 - -0.4 648,606 - -1.1 648,611 + -0.3 648,612 - -1.6 648,612 - +0.5 648,989 + -1.2 649,023 + -0.8 649,023 + -1.5 649,023 + +0.3 649,023 + -0.5 649,023 + +1.3 649,023 + -1.7 649,023 + +0.2 649,023 + -0.3 649,023 + -0.9 649,023 + -1.2 649,023 + +0.6 649,023 + -2.2 649,023 + -0.1 649,023 + +0.2 649,024 - -0.5 649,024 - +1.0 649,024 - -0.6 649,024 - -1.1 649,024 - -2.1 649,024 - +0.6 649,024 - -0.4 649,024 - +0.4 649,024 - -1.5 649,024 - +1.1 649,024 - +1.3 649,024 - +0.5 649,029 + +1.1 649,029 + +1.8 649,029 + +0.3 649,029 + -0.5 649,029 + -0.2 649,029 + -1.6 649,029 + +1.0 649,029 + +0.6 649,029 + -0.9 649,029 + -1.6 649,030 - -0.3 649,030 - -0.1 649,030 - +0.1 649,030 - +0.3 649,030 - +0.8 649,030 - +0.4 649,030 - +0.4 649,030 - +0.5 649,030 - -0.7 649,030 - -0.1 649,033 + +0.2 649,033 + +0.6 649,033 + -1.5 649,034 - +0.2 649,034 - +2.1 649,377 - Ac3H11_2391 0.34 -1.3 649,382 + Ac3H11_2391 0.35 -0.7 649,899 + Ac3H11_2391 0.89 -0.7 649,899 + Ac3H11_2391 0.89 +0.5 649,899 + Ac3H11_2391 0.89 +0.4 649,899 + Ac3H11_2391 0.89 -2.2 649,900 - Ac3H11_2391 0.89 -0.2 649,900 - Ac3H11_2391 0.89 -0.1 649,921 + +0.4 649,922 - +0.6 649,953 - +0.4 650,009 + +0.5 650,010 - +2.6 650,010 - +1.7 650,069 + -1.2 650,341 + Ac3H11_2392 0.36 -0.1 650,341 + Ac3H11_2392 0.36 +0.6 650,465 + Ac3H11_2392 0.54 +0.7 650,465 + Ac3H11_2392 0.54 -0.1 650,465 + Ac3H11_2392 0.54 +1.0 650,465 + Ac3H11_2392 0.54 +1.0 650,465 + Ac3H11_2392 0.54 -0.3 650,465 + Ac3H11_2392 0.54 +0.4 650,465 + Ac3H11_2392 0.54 +1.0 650,465 + Ac3H11_2392 0.54 +1.1 650,465 + Ac3H11_2392 0.54 +1.7 650,465 + Ac3H11_2392 0.54 -0.1 650,465 + Ac3H11_2392 0.54 +1.1 650,465 + Ac3H11_2392 0.54 +0.9 650,465 + Ac3H11_2392 0.54 -1.1 650,465 + Ac3H11_2392 0.54 +2.3 650,465 + Ac3H11_2392 0.54 -1.1 650,465 + Ac3H11_2392 0.54 -0.1 650,465 + Ac3H11_2392 0.54 +0.8 650,465 + Ac3H11_2392 0.54 +1.9 650,466 - Ac3H11_2392 0.54 +2.3 650,466 - Ac3H11_2392 0.54 +0.7 650,466 - Ac3H11_2392 0.54 +1.5 650,466 - Ac3H11_2392 0.54 -2.1 650,466 - Ac3H11_2392 0.54 -0.1 650,504 + Ac3H11_2392 0.60 +1.3 650,504 + Ac3H11_2392 0.60 -1.3 650,504 + Ac3H11_2392 0.60 +0.3 650,505 - Ac3H11_2392 0.60 +1.3 650,777 + +1.3 650,777 + +0.7 650,777 + -0.3 650,777 + -0.5 650,777 + +0.4 650,777 + -0.9 650,778 - +0.8 650,778 - +1.6 650,778 - +1.1 650,778 - +0.6 650,830 + -0.9 650,831 - -2.7 650,831 - -0.2 650,831 - -0.6 650,880 - -0.3 650,880 - +0.3 651,000 - +0.6
Or see this region's nucleotide sequence