Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27820 and AO353_27825 are separated by 278 nucleotides AO353_27825 and AO353_27830 overlap by 4 nucleotides AO353_27830 and AO353_27835 are separated by 217 nucleotides
AO353_27820: AO353_27820 - glutamine--tRNA ligase, at 6,065,465 to 6,067,162
_27820
AO353_27825: AO353_27825 - peptidylprolyl isomerase, at 6,067,441 to 6,067,944
_27825
AO353_27830: AO353_27830 - UDP-2,3-diacylglucosamine hydrolase, at 6,067,941 to 6,068,690
_27830
AO353_27835: AO353_27835 - transposase, at 6,068,908 to 6,070,338
_27835
Position (kb)
6067
6068 Strain fitness (log2 ratio)
-1
0
1
2 at 6067.178 kb on - strand at 6067.178 kb on - strand at 6067.178 kb on - strand at 6067.178 kb on - strand at 6067.278 kb on + strand at 6067.433 kb on + strand at 6067.534 kb on + strand, within AO353_27825 at 6067.534 kb on + strand, within AO353_27825 at 6067.552 kb on + strand, within AO353_27825 at 6067.565 kb on + strand, within AO353_27825 at 6067.565 kb on + strand, within AO353_27825 at 6067.690 kb on + strand, within AO353_27825 at 6067.690 kb on + strand, within AO353_27825 at 6068.684 kb on + strand at 6068.685 kb on - strand at 6068.685 kb on - strand at 6068.685 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 6,067,178 - +0.8 6,067,178 - +0.7 6,067,178 - +0.4 6,067,178 - +0.0 6,067,278 + +0.3 6,067,433 + -1.0 6,067,534 + AO353_27825 0.18 +1.0 6,067,534 + AO353_27825 0.18 -0.1 6,067,552 + AO353_27825 0.22 +0.1 6,067,565 + AO353_27825 0.25 +0.8 6,067,565 + AO353_27825 0.25 +0.0 6,067,690 + AO353_27825 0.49 +2.2 6,067,690 + AO353_27825 0.49 -0.5 6,068,684 + -0.2 6,068,685 - +1.0 6,068,685 - -0.4 6,068,685 - +1.9
Or see this region's nucleotide sequence