Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27640 and AO353_27645 are separated by 259 nucleotides AO353_27645 and AO353_27650 are separated by 58 nucleotides AO353_27650 and AO353_27655 are separated by 329 nucleotides
AO353_27640: AO353_27640 - recombination factor protein RarA, at 6,022,649 to 6,023,974
_27640
AO353_27645: AO353_27645 - outer membrane lipoprotein carrier protein LolA, at 6,024,234 to 6,024,857
_27645
AO353_27650: AO353_27650 - cell division protein FtsK, at 6,024,916 to 6,027,321
_27650
AO353_27655: AO353_27655 - thioredoxin reductase, at 6,027,651 to 6,028,601
_27655
Position (kb)
6024
6025
6026
6027
6028 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6023.979 kb on + strand at 6023.986 kb on - strand at 6023.999 kb on - strand at 6024.063 kb on + strand at 6024.139 kb on + strand at 6024.139 kb on + strand at 6024.153 kb on + strand at 6024.153 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.178 kb on + strand at 6024.179 kb on - strand at 6024.179 kb on - strand at 6024.179 kb on - strand at 6024.236 kb on - strand at 6024.236 kb on - strand at 6024.236 kb on - strand at 6024.236 kb on - strand at 6024.874 kb on - strand at 6024.928 kb on - strand at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.308 kb on - strand, within AO353_27650 at 6025.632 kb on - strand, within AO353_27650 at 6026.052 kb on - strand, within AO353_27650 at 6026.426 kb on - strand, within AO353_27650 at 6026.426 kb on - strand, within AO353_27650 at 6027.067 kb on - strand, within AO353_27650 at 6027.067 kb on - strand, within AO353_27650 at 6027.140 kb on - strand at 6027.160 kb on - strand at 6027.189 kb on - strand at 6027.189 kb on - strand at 6027.396 kb on - strand at 6027.430 kb on - strand at 6027.486 kb on - strand at 6027.513 kb on - strand at 6027.528 kb on - strand at 6027.564 kb on - strand at 6027.564 kb on - strand at 6027.564 kb on - strand at 6027.564 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.571 kb on - strand at 6027.663 kb on - strand at 6027.663 kb on - strand at 6027.720 kb on + strand at 6027.752 kb on + strand, within AO353_27655 at 6027.753 kb on - strand, within AO353_27655 at 6027.753 kb on - strand, within AO353_27655 at 6027.753 kb on - strand, within AO353_27655 at 6027.895 kb on - strand, within AO353_27655 at 6027.895 kb on - strand, within AO353_27655 at 6027.895 kb on - strand, within AO353_27655 at 6027.960 kb on + strand, within AO353_27655 at 6027.960 kb on + strand, within AO353_27655 at 6027.960 kb on + strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6027.961 kb on - strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.005 kb on + strand, within AO353_27655 at 6028.006 kb on - strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.140 kb on + strand, within AO353_27655 at 6028.141 kb on - strand at 6028.141 kb on - strand, within AO353_27655 at 6028.141 kb on - strand, within AO353_27655 at 6028.141 kb on - strand, within AO353_27655 at 6028.282 kb on + strand, within AO353_27655 at 6028.282 kb on + strand, within AO353_27655 at 6028.282 kb on + strand, within AO353_27655 at 6028.283 kb on - strand, within AO353_27655 at 6028.283 kb on - strand, within AO353_27655
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 6,023,979 + +0.4 6,023,986 - -0.6 6,023,999 - +0.4 6,024,063 + +1.8 6,024,139 + +0.6 6,024,139 + -0.1 6,024,153 + +0.3 6,024,153 + +1.2 6,024,178 + +0.4 6,024,178 + +1.7 6,024,178 + +0.9 6,024,178 + -1.0 6,024,178 + +0.6 6,024,178 + -0.1 6,024,179 - +0.6 6,024,179 - -0.8 6,024,179 - -0.4 6,024,236 - -0.4 6,024,236 - -0.6 6,024,236 - -1.2 6,024,236 - +0.2 6,024,874 - +1.0 6,024,928 - -0.1 6,025,308 - AO353_27650 0.16 +1.0 6,025,308 - AO353_27650 0.16 -1.2 6,025,308 - AO353_27650 0.16 -2.2 6,025,308 - AO353_27650 0.16 -2.6 6,025,308 - AO353_27650 0.16 +1.0 6,025,308 - AO353_27650 0.16 +0.0 6,025,308 - AO353_27650 0.16 -2.0 6,025,308 - AO353_27650 0.16 +0.4 6,025,308 - AO353_27650 0.16 +0.0 6,025,308 - AO353_27650 0.16 -2.2 6,025,632 - AO353_27650 0.30 -1.3 6,026,052 - AO353_27650 0.47 -1.6 6,026,426 - AO353_27650 0.63 -2.1 6,026,426 - AO353_27650 0.63 -0.8 6,027,067 - AO353_27650 0.89 -0.1 6,027,067 - AO353_27650 0.89 -1.6 6,027,140 - -2.0 6,027,160 - -0.8 6,027,189 - +0.0 6,027,189 - -2.0 6,027,396 - -0.7 6,027,430 - -0.6 6,027,486 - +0.0 6,027,513 - -0.2 6,027,528 - +0.1 6,027,564 - -3.2 6,027,564 - -1.1 6,027,564 - +1.0 6,027,564 - +0.2 6,027,571 - +2.6 6,027,571 - -1.0 6,027,571 - +0.1 6,027,571 - -0.4 6,027,571 - +0.6 6,027,571 - -1.0 6,027,571 - -0.4 6,027,571 - -0.9 6,027,663 - -0.1 6,027,663 - +0.0 6,027,720 + +0.0 6,027,752 + AO353_27655 0.11 -1.2 6,027,753 - AO353_27655 0.11 -0.1 6,027,753 - AO353_27655 0.11 -1.0 6,027,753 - AO353_27655 0.11 +0.1 6,027,895 - AO353_27655 0.26 +0.0 6,027,895 - AO353_27655 0.26 -2.0 6,027,895 - AO353_27655 0.26 -1.0 6,027,960 + AO353_27655 0.32 -0.2 6,027,960 + AO353_27655 0.32 +0.3 6,027,960 + AO353_27655 0.32 +0.0 6,027,961 - AO353_27655 0.33 -0.4 6,027,961 - AO353_27655 0.33 +0.5 6,027,961 - AO353_27655 0.33 -0.2 6,027,961 - AO353_27655 0.33 -1.2 6,027,961 - AO353_27655 0.33 +0.3 6,027,961 - AO353_27655 0.33 -0.3 6,027,961 - AO353_27655 0.33 -0.4 6,027,961 - AO353_27655 0.33 +0.4 6,027,961 - AO353_27655 0.33 -1.4 6,027,961 - AO353_27655 0.33 +1.8 6,027,961 - AO353_27655 0.33 -0.5 6,027,961 - AO353_27655 0.33 -0.7 6,028,005 + AO353_27655 0.37 -0.6 6,028,005 + AO353_27655 0.37 +1.0 6,028,005 + AO353_27655 0.37 +0.1 6,028,005 + AO353_27655 0.37 -0.2 6,028,005 + AO353_27655 0.37 -0.6 6,028,005 + AO353_27655 0.37 -1.1 6,028,006 - AO353_27655 0.37 +0.5 6,028,140 + AO353_27655 0.51 -0.6 6,028,140 + AO353_27655 0.51 -0.4 6,028,140 + AO353_27655 0.51 -0.4 6,028,140 + AO353_27655 0.51 +2.3 6,028,141 - -1.6 6,028,141 - AO353_27655 0.52 +0.6 6,028,141 - AO353_27655 0.52 -0.3 6,028,141 - AO353_27655 0.52 +0.0 6,028,282 + AO353_27655 0.66 +0.7 6,028,282 + AO353_27655 0.66 +0.0 6,028,282 + AO353_27655 0.66 -0.4 6,028,283 - AO353_27655 0.66 -0.9 6,028,283 - AO353_27655 0.66 +0.3
Or see this region's nucleotide sequence