Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25580 and AO353_25585 are separated by 294 nucleotides AO353_25585 and AO353_25590 are separated by 83 nucleotides AO353_25590 and AO353_25595 are separated by 10 nucleotides
AO353_25580: AO353_25580 - LysR family transcriptional regulator, at 5,642,698 to 5,643,663
_25580
AO353_25585: AO353_25585 - argininosuccinate lyase, at 5,643,958 to 5,645,385
_25585
AO353_25590: AO353_25590 - ABC transporter permease, at 5,645,469 to 5,646,344
_25590
AO353_25595: AO353_25595 - ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA, at 5,646,355 to 5,647,119
_25595
Position (kb)
5643
5644
5645
5646 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5643.099 kb on - strand, within AO353_25580 at 5643.110 kb on + strand, within AO353_25580 at 5643.111 kb on - strand, within AO353_25580 at 5643.145 kb on + strand, within AO353_25580 at 5643.170 kb on - strand, within AO353_25580 at 5643.342 kb on + strand, within AO353_25580 at 5643.342 kb on + strand, within AO353_25580 at 5643.343 kb on - strand, within AO353_25580 at 5643.343 kb on - strand, within AO353_25580 at 5643.423 kb on + strand, within AO353_25580 at 5643.423 kb on + strand, within AO353_25580 at 5643.423 kb on + strand, within AO353_25580 at 5643.424 kb on - strand, within AO353_25580 at 5643.445 kb on - strand, within AO353_25580 at 5643.565 kb on + strand, within AO353_25580 at 5643.566 kb on - strand, within AO353_25580 at 5643.671 kb on - strand at 5643.671 kb on - strand at 5643.674 kb on + strand at 5643.732 kb on - strand at 5644.049 kb on - strand at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5644.918 kb on + strand, within AO353_25585 at 5645.366 kb on - strand at 5645.387 kb on + strand at 5645.388 kb on - strand at 5645.423 kb on + strand at 5645.424 kb on - strand at 5645.424 kb on - strand at 5645.538 kb on + strand at 5645.538 kb on + strand at 5645.539 kb on - strand at 5645.539 kb on - strand at 5645.539 kb on - strand at 5645.548 kb on + strand at 5645.548 kb on + strand at 5645.548 kb on + strand at 5645.548 kb on + strand at 5645.549 kb on - strand at 5645.549 kb on - strand at 5645.549 kb on - strand at 5645.563 kb on - strand, within AO353_25590 at 5645.649 kb on + strand, within AO353_25590 at 5645.650 kb on - strand, within AO353_25590 at 5645.650 kb on - strand, within AO353_25590 at 5645.650 kb on - strand, within AO353_25590 at 5645.794 kb on - strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.808 kb on + strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.809 kb on - strand, within AO353_25590 at 5645.876 kb on - strand, within AO353_25590 at 5645.876 kb on - strand, within AO353_25590 at 5645.979 kb on + strand, within AO353_25590 at 5645.979 kb on + strand, within AO353_25590 at 5645.980 kb on - strand, within AO353_25590 at 5645.980 kb on - strand, within AO353_25590 at 5646.192 kb on + strand, within AO353_25590 at 5646.192 kb on + strand, within AO353_25590 at 5646.193 kb on - strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.210 kb on + strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.211 kb on - strand, within AO353_25590 at 5646.214 kb on - strand, within AO353_25590 at 5646.214 kb on - strand, within AO353_25590 at 5646.238 kb on + strand, within AO353_25590 at 5646.239 kb on - strand, within AO353_25590 at 5646.261 kb on + strand at 5646.261 kb on + strand at 5646.262 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 5,643,099 - AO353_25580 0.42 -0.3 5,643,110 + AO353_25580 0.43 +0.9 5,643,111 - AO353_25580 0.43 +1.1 5,643,145 + AO353_25580 0.46 +0.3 5,643,170 - AO353_25580 0.49 -0.1 5,643,342 + AO353_25580 0.67 +0.2 5,643,342 + AO353_25580 0.67 -1.1 5,643,343 - AO353_25580 0.67 +0.7 5,643,343 - AO353_25580 0.67 +0.7 5,643,423 + AO353_25580 0.75 +0.1 5,643,423 + AO353_25580 0.75 +0.1 5,643,423 + AO353_25580 0.75 -0.6 5,643,424 - AO353_25580 0.75 -0.7 5,643,445 - AO353_25580 0.77 +1.2 5,643,565 + AO353_25580 0.90 -0.1 5,643,566 - AO353_25580 0.90 -0.7 5,643,671 - +1.1 5,643,671 - -1.7 5,643,674 + -0.1 5,643,732 - -0.5 5,644,049 - -0.6 5,644,918 + AO353_25585 0.67 +0.3 5,644,918 + AO353_25585 0.67 -0.1 5,644,918 + AO353_25585 0.67 +0.4 5,644,918 + AO353_25585 0.67 +1.3 5,644,918 + AO353_25585 0.67 -1.1 5,645,366 - -0.9 5,645,387 + -0.7 5,645,388 - -0.2 5,645,423 + -0.0 5,645,424 - -2.4 5,645,424 - +2.4 5,645,538 + -0.4 5,645,538 + -0.4 5,645,539 - -0.4 5,645,539 - +0.4 5,645,539 - -0.1 5,645,548 + -1.4 5,645,548 + -0.7 5,645,548 + +0.9 5,645,548 + +0.3 5,645,549 - +1.2 5,645,549 - -1.5 5,645,549 - -0.8 5,645,563 - AO353_25590 0.11 +1.2 5,645,649 + AO353_25590 0.21 +0.2 5,645,650 - AO353_25590 0.21 +0.1 5,645,650 - AO353_25590 0.21 +0.2 5,645,650 - AO353_25590 0.21 -1.4 5,645,794 - AO353_25590 0.37 +0.9 5,645,808 + AO353_25590 0.39 +0.5 5,645,808 + AO353_25590 0.39 -1.5 5,645,808 + AO353_25590 0.39 +0.9 5,645,808 + AO353_25590 0.39 +0.9 5,645,808 + AO353_25590 0.39 +0.2 5,645,809 - AO353_25590 0.39 -1.3 5,645,809 - AO353_25590 0.39 -0.1 5,645,809 - AO353_25590 0.39 -1.5 5,645,809 - AO353_25590 0.39 -0.1 5,645,809 - AO353_25590 0.39 +0.5 5,645,876 - AO353_25590 0.46 -1.7 5,645,876 - AO353_25590 0.46 +0.2 5,645,979 + AO353_25590 0.58 +0.1 5,645,979 + AO353_25590 0.58 -0.2 5,645,980 - AO353_25590 0.58 +0.1 5,645,980 - AO353_25590 0.58 -1.1 5,646,192 + AO353_25590 0.83 -1.4 5,646,192 + AO353_25590 0.83 +0.1 5,646,193 - AO353_25590 0.83 +0.3 5,646,210 + AO353_25590 0.85 -0.5 5,646,210 + AO353_25590 0.85 -0.5 5,646,210 + AO353_25590 0.85 -1.7 5,646,210 + AO353_25590 0.85 +0.2 5,646,210 + AO353_25590 0.85 +0.9 5,646,211 - AO353_25590 0.85 -0.2 5,646,211 - AO353_25590 0.85 +1.5 5,646,211 - AO353_25590 0.85 +0.1 5,646,211 - AO353_25590 0.85 -1.2 5,646,211 - AO353_25590 0.85 -0.8 5,646,214 - AO353_25590 0.85 -0.5 5,646,214 - AO353_25590 0.85 -0.1 5,646,238 + AO353_25590 0.88 -0.6 5,646,239 - AO353_25590 0.88 -0.3 5,646,261 + -0.2 5,646,261 + -0.8 5,646,262 - -3.3
Or see this region's nucleotide sequence