Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25045 and AO353_25050 are separated by 416 nucleotides
AO353_25045: AO353_25045 - AraC family transcriptional regulator, at 5,522,610 to 5,523,713
_25045
AO353_25050: AO353_25050 - AraC family transcriptional regulator, at 5,524,130 to 5,525,233
_25050
Position (kb)
5524
5525
5526 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5523.148 kb on + strand, within AO353_25045 at 5523.210 kb on + strand, within AO353_25045 at 5523.211 kb on - strand, within AO353_25045 at 5523.211 kb on - strand, within AO353_25045 at 5523.211 kb on - strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.260 kb on + strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.261 kb on - strand, within AO353_25045 at 5523.295 kb on + strand, within AO353_25045 at 5523.296 kb on - strand, within AO353_25045 at 5523.319 kb on + strand, within AO353_25045 at 5523.320 kb on - strand, within AO353_25045 at 5523.354 kb on + strand, within AO353_25045 at 5523.354 kb on + strand, within AO353_25045 at 5523.354 kb on + strand, within AO353_25045 at 5523.354 kb on + strand, within AO353_25045 at 5523.354 kb on + strand, within AO353_25045 at 5523.354 kb on + strand, within AO353_25045 at 5523.355 kb on - strand, within AO353_25045 at 5523.399 kb on + strand, within AO353_25045 at 5523.400 kb on - strand, within AO353_25045 at 5523.423 kb on + strand, within AO353_25045 at 5523.423 kb on + strand, within AO353_25045 at 5523.426 kb on + strand, within AO353_25045 at 5523.426 kb on + strand, within AO353_25045 at 5523.426 kb on + strand, within AO353_25045 at 5523.426 kb on + strand, within AO353_25045 at 5523.549 kb on + strand, within AO353_25045 at 5523.549 kb on + strand at 5523.549 kb on + strand, within AO353_25045 at 5523.549 kb on + strand, within AO353_25045 at 5523.552 kb on + strand, within AO353_25045 at 5523.580 kb on + strand, within AO353_25045 at 5523.580 kb on + strand, within AO353_25045 at 5523.581 kb on - strand, within AO353_25045 at 5523.581 kb on - strand, within AO353_25045 at 5523.581 kb on - strand, within AO353_25045 at 5523.711 kb on + strand at 5523.711 kb on + strand at 5523.711 kb on + strand at 5523.711 kb on + strand at 5523.711 kb on + strand at 5523.711 kb on + strand at 5523.711 kb on + strand at 5523.808 kb on + strand at 5523.872 kb on + strand at 5523.879 kb on + strand at 5523.880 kb on - strand at 5523.882 kb on + strand at 5523.882 kb on + strand at 5523.883 kb on - strand at 5523.883 kb on - strand at 5523.885 kb on + strand at 5523.885 kb on + strand at 5523.892 kb on + strand at 5523.892 kb on + strand at 5523.892 kb on + strand at 5523.892 kb on + strand at 5523.893 kb on - strand at 5523.893 kb on - strand at 5523.919 kb on + strand at 5523.939 kb on + strand at 5523.943 kb on + strand at 5523.943 kb on + strand at 5523.963 kb on + strand at 5523.963 kb on + strand at 5523.964 kb on - strand at 5523.964 kb on - strand at 5524.073 kb on + strand at 5524.074 kb on - strand at 5524.074 kb on - strand at 5524.077 kb on - strand at 5524.123 kb on + strand at 5524.123 kb on + strand at 5524.123 kb on + strand at 5524.124 kb on - strand at 5524.124 kb on - strand at 5524.124 kb on - strand at 5524.730 kb on + strand, within AO353_25050 at 5524.730 kb on + strand, within AO353_25050 at 5524.731 kb on - strand, within AO353_25050 at 5524.943 kb on + strand at 5524.944 kb on - strand, within AO353_25050 at 5524.946 kb on + strand, within AO353_25050 at 5524.947 kb on - strand, within AO353_25050 at 5525.020 kb on + strand, within AO353_25050 at 5525.020 kb on + strand, within AO353_25050 at 5525.021 kb on - strand, within AO353_25050 at 5525.069 kb on + strand, within AO353_25050 at 5525.070 kb on - strand, within AO353_25050 at 5525.070 kb on - strand, within AO353_25050 at 5525.072 kb on + strand, within AO353_25050 at 5525.072 kb on + strand, within AO353_25050 at 5525.072 kb on + strand, within AO353_25050 at 5525.072 kb on + strand, within AO353_25050 at 5525.072 kb on + strand, within AO353_25050 at 5525.073 kb on - strand, within AO353_25050 at 5525.073 kb on - strand, within AO353_25050 at 5525.073 kb on - strand, within AO353_25050 at 5525.171 kb on - strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.237 kb on + strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.238 kb on - strand at 5525.239 kb on + strand at 5525.266 kb on + strand at 5525.266 kb on + strand at 5525.267 kb on - strand at 5525.307 kb on + strand at 5525.307 kb on + strand at 5525.307 kb on + strand at 5525.307 kb on + strand at 5525.307 kb on + strand at 5525.308 kb on - strand at 5525.311 kb on + strand at 5525.311 kb on + strand at 5525.311 kb on + strand at 5525.311 kb on + strand at 5525.312 kb on - strand at 5525.312 kb on - strand at 5525.312 kb on - strand at 5525.385 kb on + strand at 5525.386 kb on - strand at 5525.395 kb on + strand at 5525.395 kb on + strand at 5525.396 kb on - strand at 5525.407 kb on + strand at 5525.433 kb on + strand at 5525.433 kb on + strand at 5525.434 kb on - strand at 5525.434 kb on - strand at 5525.434 kb on - strand at 5525.434 kb on - strand at 5525.434 kb on - strand at 5525.480 kb on - strand at 5525.481 kb on + strand at 5525.481 kb on + strand at 5525.482 kb on - strand at 5525.482 kb on - strand at 5525.507 kb on + strand at 5525.507 kb on + strand at 5525.507 kb on + strand at 5525.507 kb on + strand at 5525.507 kb on + strand at 5525.508 kb on - strand at 5525.511 kb on + strand at 5525.512 kb on - strand at 5525.512 kb on - strand at 5525.512 kb on - strand at 5525.512 kb on - strand at 5525.521 kb on + strand at 5525.521 kb on + strand at 5525.521 kb on + strand at 5525.521 kb on + strand at 5525.521 kb on + strand at 5525.562 kb on + strand at 5525.563 kb on - strand at 5525.563 kb on - strand at 5525.669 kb on - strand at 5525.759 kb on + strand at 5525.760 kb on - strand at 5525.760 kb on - strand at 5525.773 kb on + strand at 5525.820 kb on + strand at 5525.821 kb on - strand at 5525.834 kb on - strand at 5525.834 kb on - strand at 5525.861 kb on - strand at 5525.908 kb on + strand at 5525.908 kb on + strand at 5525.908 kb on + strand at 5525.909 kb on - strand at 5525.909 kb on - strand at 5525.976 kb on + strand at 5525.976 kb on + strand at 5525.976 kb on + strand at 5525.977 kb on - strand at 5525.977 kb on - strand at 5526.102 kb on + strand at 5526.102 kb on + strand at 5526.102 kb on + strand at 5526.102 kb on + strand at 5526.103 kb on - strand at 5526.103 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 5,523,148 + AO353_25045 0.49 +0.2 5,523,210 + AO353_25045 0.54 +0.3 5,523,211 - AO353_25045 0.54 -1.3 5,523,211 - AO353_25045 0.54 +0.3 5,523,211 - AO353_25045 0.54 -0.9 5,523,260 + AO353_25045 0.59 +0.4 5,523,260 + AO353_25045 0.59 +0.6 5,523,260 + AO353_25045 0.59 -0.5 5,523,260 + AO353_25045 0.59 +0.9 5,523,260 + AO353_25045 0.59 -0.5 5,523,260 + AO353_25045 0.59 -1.6 5,523,261 - AO353_25045 0.59 -0.6 5,523,261 - AO353_25045 0.59 -2.4 5,523,261 - AO353_25045 0.59 -0.3 5,523,261 - AO353_25045 0.59 +0.3 5,523,261 - AO353_25045 0.59 -1.6 5,523,261 - AO353_25045 0.59 -0.4 5,523,295 + AO353_25045 0.62 +0.1 5,523,296 - AO353_25045 0.62 +0.4 5,523,319 + AO353_25045 0.64 +0.9 5,523,320 - AO353_25045 0.64 -0.1 5,523,354 + AO353_25045 0.67 +0.4 5,523,354 + AO353_25045 0.67 -0.5 5,523,354 + AO353_25045 0.67 -0.9 5,523,354 + AO353_25045 0.67 +0.2 5,523,354 + AO353_25045 0.67 +0.5 5,523,354 + AO353_25045 0.67 -0.9 5,523,355 - AO353_25045 0.67 -0.6 5,523,399 + AO353_25045 0.71 -2.1 5,523,400 - AO353_25045 0.72 +0.1 5,523,423 + AO353_25045 0.74 +0.5 5,523,423 + AO353_25045 0.74 -0.1 5,523,426 + AO353_25045 0.74 +1.3 5,523,426 + AO353_25045 0.74 +0.6 5,523,426 + AO353_25045 0.74 -0.7 5,523,426 + AO353_25045 0.74 +0.0 5,523,549 + AO353_25045 0.85 +0.6 5,523,549 + -0.1 5,523,549 + AO353_25045 0.85 +0.6 5,523,549 + AO353_25045 0.85 -0.9 5,523,552 + AO353_25045 0.85 -0.1 5,523,580 + AO353_25045 0.88 +0.8 5,523,580 + AO353_25045 0.88 -0.6 5,523,581 - AO353_25045 0.88 +1.7 5,523,581 - AO353_25045 0.88 +0.5 5,523,581 - AO353_25045 0.88 +0.7 5,523,711 + +1.5 5,523,711 + +0.3 5,523,711 + +0.3 5,523,711 + +0.1 5,523,711 + -0.5 5,523,711 + -0.3 5,523,711 + +0.2 5,523,808 + -0.1 5,523,872 + -0.6 5,523,879 + -0.8 5,523,880 - -1.4 5,523,882 + +0.4 5,523,882 + -2.3 5,523,883 - -0.1 5,523,883 - -0.8 5,523,885 + -0.1 5,523,885 + -0.8 5,523,892 + -1.3 5,523,892 + +0.7 5,523,892 + -2.1 5,523,892 + +0.8 5,523,893 - -0.8 5,523,893 - +0.9 5,523,919 + -0.8 5,523,939 + -0.1 5,523,943 + -1.0 5,523,943 + +0.0 5,523,963 + +0.1 5,523,963 + -0.4 5,523,964 - +2.1 5,523,964 - +1.3 5,524,073 + -0.4 5,524,074 - +0.9 5,524,074 - -0.8 5,524,077 - -0.5 5,524,123 + -0.2 5,524,123 + -0.1 5,524,123 + -1.3 5,524,124 - +0.1 5,524,124 - +1.3 5,524,124 - -0.8 5,524,730 + AO353_25050 0.54 +0.8 5,524,730 + AO353_25050 0.54 +2.5 5,524,731 - AO353_25050 0.54 +0.7 5,524,943 + +1.2 5,524,944 - AO353_25050 0.74 -0.6 5,524,946 + AO353_25050 0.74 +1.6 5,524,947 - AO353_25050 0.74 -2.6 5,525,020 + AO353_25050 0.81 -0.1 5,525,020 + AO353_25050 0.81 +0.3 5,525,021 - AO353_25050 0.81 +0.9 5,525,069 + AO353_25050 0.85 -0.9 5,525,070 - AO353_25050 0.85 +0.7 5,525,070 - AO353_25050 0.85 -0.1 5,525,072 + AO353_25050 0.85 +1.3 5,525,072 + AO353_25050 0.85 -0.4 5,525,072 + AO353_25050 0.85 +0.6 5,525,072 + AO353_25050 0.85 -0.1 5,525,072 + AO353_25050 0.85 +0.6 5,525,073 - AO353_25050 0.85 -1.4 5,525,073 - AO353_25050 0.85 -0.1 5,525,073 - AO353_25050 0.85 +0.7 5,525,171 - -1.9 5,525,237 + -0.5 5,525,237 + -0.9 5,525,237 + -0.1 5,525,237 + +0.3 5,525,237 + -0.4 5,525,237 + +1.9 5,525,237 + -0.3 5,525,237 + +0.9 5,525,237 + +0.2 5,525,238 - -1.1 5,525,238 - +0.3 5,525,238 - -0.7 5,525,238 - +0.4 5,525,238 - +0.5 5,525,238 - -0.6 5,525,238 - -1.7 5,525,238 - -0.1 5,525,238 - +0.1 5,525,238 - -0.4 5,525,239 + -0.6 5,525,266 + -0.8 5,525,266 + +0.7 5,525,267 - +0.4 5,525,307 + +0.6 5,525,307 + -0.4 5,525,307 + -2.2 5,525,307 + -0.4 5,525,307 + +1.1 5,525,308 - +2.5 5,525,311 + +0.3 5,525,311 + -0.3 5,525,311 + -0.8 5,525,311 + -0.7 5,525,312 - +0.9 5,525,312 - +0.3 5,525,312 - -0.1 5,525,385 + +0.9 5,525,386 - +0.4 5,525,395 + -0.2 5,525,395 + +0.1 5,525,396 - +0.6 5,525,407 + -0.8 5,525,433 + +1.3 5,525,433 + +0.9 5,525,434 - -1.3 5,525,434 - -0.3 5,525,434 - +0.5 5,525,434 - -0.9 5,525,434 - +0.2 5,525,480 - -0.3 5,525,481 + -0.5 5,525,481 + -1.3 5,525,482 - -0.2 5,525,482 - +1.1 5,525,507 + -1.0 5,525,507 + -0.2 5,525,507 + -0.1 5,525,507 + -0.1 5,525,507 + -1.6 5,525,508 - -0.0 5,525,511 + +0.2 5,525,512 - -0.8 5,525,512 - +0.9 5,525,512 - -0.1 5,525,512 - -0.3 5,525,521 + -0.8 5,525,521 + +0.9 5,525,521 + -0.7 5,525,521 + +0.3 5,525,521 + -1.4 5,525,562 + -0.4 5,525,563 - -0.1 5,525,563 - +0.2 5,525,669 - +0.6 5,525,759 + +0.7 5,525,760 - +0.3 5,525,760 - +0.2 5,525,773 + -0.5 5,525,820 + -0.2 5,525,821 - +0.9 5,525,834 - -1.3 5,525,834 - -1.1 5,525,861 - -1.6 5,525,908 + -0.4 5,525,908 + -0.9 5,525,908 + +0.7 5,525,909 - +1.3 5,525,909 - -0.1 5,525,976 + +0.4 5,525,976 + -0.0 5,525,976 + +0.0 5,525,977 - -1.0 5,525,977 - +0.2 5,526,102 + +0.1 5,526,102 + -0.1 5,526,102 + -1.3 5,526,102 + +0.1 5,526,103 - +0.7 5,526,103 - -0.1
Or see this region's nucleotide sequence