Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24810 and AO353_24815 are separated by 5 nucleotides AO353_24815 and AO353_24820 overlap by 4 nucleotides AO353_24820 and AO353_24825 are separated by 209 nucleotides
AO353_24810: AO353_24810 - transcriptional regulator, at 5,469,413 to 5,470,129
_24810
AO353_24815: AO353_24815 - amino acid ABC transporter substrate-binding protein, at 5,470,135 to 5,470,908
_24815
AO353_24820: AO353_24820 - histidine kinase, at 5,470,905 to 5,473,166
_24820
AO353_24825: AO353_24825 - amino acid transporter, at 5,473,376 to 5,474,788
_24825
Position (kb) 5470
5471
5472
5473
5474 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5469.908 kb on + strand, within AO353_24810 at 5469.924 kb on + strand, within AO353_24810 at 5469.924 kb on + strand, within AO353_24810 at 5469.925 kb on - strand, within AO353_24810 at 5469.925 kb on - strand, within AO353_24810 at 5470.134 kb on + strand at 5470.134 kb on + strand at 5470.134 kb on + strand at 5470.135 kb on - strand at 5470.391 kb on - strand, within AO353_24815 at 5470.516 kb on + strand, within AO353_24815 at 5470.517 kb on - strand, within AO353_24815 at 5470.680 kb on + strand, within AO353_24815 at 5470.681 kb on + strand, within AO353_24815 at 5470.681 kb on + strand, within AO353_24815 at 5470.682 kb on - strand, within AO353_24815 at 5470.682 kb on - strand, within AO353_24815 at 5470.744 kb on + strand, within AO353_24815 at 5470.744 kb on + strand, within AO353_24815 at 5470.745 kb on - strand, within AO353_24815 at 5470.745 kb on - strand, within AO353_24815 at 5471.004 kb on + strand at 5471.004 kb on + strand at 5471.005 kb on - strand at 5471.005 kb on - strand at 5471.250 kb on + strand, within AO353_24820 at 5471.368 kb on + strand, within AO353_24820 at 5471.368 kb on + strand, within AO353_24820 at 5471.368 kb on + strand, within AO353_24820 at 5471.368 kb on + strand, within AO353_24820 at 5471.368 kb on + strand, within AO353_24820 at 5471.369 kb on - strand, within AO353_24820 at 5471.369 kb on - strand, within AO353_24820 at 5471.409 kb on + strand, within AO353_24820 at 5471.409 kb on + strand at 5471.409 kb on + strand, within AO353_24820 at 5471.409 kb on + strand, within AO353_24820 at 5471.410 kb on - strand, within AO353_24820 at 5471.410 kb on - strand, within AO353_24820 at 5471.556 kb on - strand, within AO353_24820 at 5471.832 kb on + strand, within AO353_24820 at 5471.878 kb on - strand, within AO353_24820 at 5472.415 kb on + strand, within AO353_24820 at 5472.415 kb on + strand, within AO353_24820 at 5472.416 kb on - strand, within AO353_24820 at 5472.416 kb on - strand, within AO353_24820 at 5472.416 kb on - strand, within AO353_24820 at 5472.416 kb on - strand, within AO353_24820 at 5472.668 kb on + strand, within AO353_24820 at 5473.169 kb on + strand at 5473.169 kb on + strand at 5473.169 kb on + strand at 5473.169 kb on + strand at 5473.169 kb on + strand at 5473.170 kb on - strand at 5473.170 kb on - strand at 5473.170 kb on - strand at 5473.191 kb on - strand at 5473.205 kb on + strand at 5473.205 kb on + strand at 5473.206 kb on - strand at 5473.222 kb on + strand at 5473.223 kb on - strand at 5473.223 kb on - strand at 5473.223 kb on - strand at 5473.275 kb on + strand at 5473.275 kb on + strand at 5473.284 kb on + strand at 5473.285 kb on - strand at 5473.285 kb on - strand at 5473.285 kb on - strand at 5473.285 kb on - strand at 5473.287 kb on + strand at 5473.287 kb on + strand at 5473.287 kb on + strand at 5473.287 kb on + strand at 5473.287 kb on + strand at 5473.287 kb on + strand at 5473.287 kb on + strand at 5473.287 kb on + strand at 5473.288 kb on - strand at 5473.288 kb on - strand at 5473.288 kb on - strand at 5473.288 kb on - strand at 5473.288 kb on - strand at 5473.288 kb on - strand at 5473.290 kb on + strand at 5473.387 kb on + strand at 5473.396 kb on + strand at 5473.396 kb on + strand at 5473.397 kb on - strand at 5473.404 kb on + strand at 5473.404 kb on + strand at 5473.404 kb on + strand at 5473.405 kb on - strand at 5473.405 kb on - strand at 5473.405 kb on - strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.437 kb on + strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.438 kb on - strand at 5473.501 kb on + strand at 5473.525 kb on + strand, within AO353_24825 at 5473.525 kb on + strand, within AO353_24825 at 5473.525 kb on + strand, within AO353_24825 at 5473.526 kb on - strand, within AO353_24825 at 5473.559 kb on + strand, within AO353_24825 at 5473.559 kb on + strand, within AO353_24825 at 5473.559 kb on + strand, within AO353_24825 at 5473.560 kb on - strand, within AO353_24825 at 5473.560 kb on - strand, within AO353_24825 at 5473.560 kb on - strand, within AO353_24825 at 5473.560 kb on - strand, within AO353_24825 at 5473.594 kb on - strand, within AO353_24825 at 5473.594 kb on - strand, within AO353_24825 at 5473.677 kb on - strand, within AO353_24825 at 5473.842 kb on - strand, within AO353_24825 at 5473.999 kb on - strand, within AO353_24825 at 5474.025 kb on - strand, within AO353_24825 at 5474.135 kb on + strand, within AO353_24825 at 5474.151 kb on + strand, within AO353_24825 at 5474.152 kb on - strand, within AO353_24825
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 5,469,908 + AO353_24810 0.69 +0.2 5,469,924 + AO353_24810 0.71 +0.9 5,469,924 + AO353_24810 0.71 -1.8 5,469,925 - AO353_24810 0.71 -0.5 5,469,925 - AO353_24810 0.71 -0.7 5,470,134 + +4.2 5,470,134 + +0.3 5,470,134 + -0.2 5,470,135 - -0.1 5,470,391 - AO353_24815 0.33 -0.3 5,470,516 + AO353_24815 0.49 +1.1 5,470,517 - AO353_24815 0.49 +0.5 5,470,680 + AO353_24815 0.70 -0.6 5,470,681 + AO353_24815 0.71 -0.4 5,470,681 + AO353_24815 0.71 +0.4 5,470,682 - AO353_24815 0.71 +0.7 5,470,682 - AO353_24815 0.71 +2.9 5,470,744 + AO353_24815 0.79 +0.9 5,470,744 + AO353_24815 0.79 -0.8 5,470,745 - AO353_24815 0.79 +0.3 5,470,745 - AO353_24815 0.79 -0.1 5,471,004 + +0.2 5,471,004 + -0.0 5,471,005 - +0.3 5,471,005 - +0.5 5,471,250 + AO353_24820 0.15 +0.5 5,471,368 + AO353_24820 0.20 +1.6 5,471,368 + AO353_24820 0.20 +0.0 5,471,368 + AO353_24820 0.20 +0.9 5,471,368 + AO353_24820 0.20 +0.2 5,471,368 + AO353_24820 0.20 -2.1 5,471,369 - AO353_24820 0.21 +0.6 5,471,369 - AO353_24820 0.21 -0.3 5,471,409 + AO353_24820 0.22 -0.0 5,471,409 + -0.1 5,471,409 + AO353_24820 0.22 +1.2 5,471,409 + AO353_24820 0.22 -1.2 5,471,410 - AO353_24820 0.22 +0.7 5,471,410 - AO353_24820 0.22 +1.2 5,471,556 - AO353_24820 0.29 +0.2 5,471,832 + AO353_24820 0.41 -1.4 5,471,878 - AO353_24820 0.43 +2.0 5,472,415 + AO353_24820 0.67 -0.8 5,472,415 + AO353_24820 0.67 -1.1 5,472,416 - AO353_24820 0.67 +1.7 5,472,416 - AO353_24820 0.67 +1.0 5,472,416 - AO353_24820 0.67 +1.3 5,472,416 - AO353_24820 0.67 -0.8 5,472,668 + AO353_24820 0.78 -0.1 5,473,169 + +0.7 5,473,169 + -0.4 5,473,169 + +1.4 5,473,169 + +0.3 5,473,169 + -1.3 5,473,170 - +0.3 5,473,170 - +0.0 5,473,170 - -0.7 5,473,191 - -1.0 5,473,205 + +0.7 5,473,205 + +0.6 5,473,206 - -1.3 5,473,222 + -0.8 5,473,223 - -0.3 5,473,223 - -0.1 5,473,223 - +0.7 5,473,275 + -0.7 5,473,275 + +0.5 5,473,284 + -0.7 5,473,285 - +0.6 5,473,285 - +0.6 5,473,285 - -0.3 5,473,285 - +0.9 5,473,287 + -0.3 5,473,287 + -0.7 5,473,287 + +0.9 5,473,287 + -1.9 5,473,287 + -0.5 5,473,287 + +0.4 5,473,287 + +0.3 5,473,287 + -0.7 5,473,288 - +0.2 5,473,288 - -0.7 5,473,288 - -1.1 5,473,288 - +1.3 5,473,288 - -0.1 5,473,288 - +0.3 5,473,290 + +0.4 5,473,387 + -0.1 5,473,396 + -0.7 5,473,396 + +0.3 5,473,397 - -0.8 5,473,404 + +0.7 5,473,404 + +0.5 5,473,404 + -0.5 5,473,405 - +0.1 5,473,405 - +0.9 5,473,405 - +1.1 5,473,437 + +0.9 5,473,437 + +0.3 5,473,437 + +0.7 5,473,437 + -0.1 5,473,437 + +1.8 5,473,437 + +1.0 5,473,437 + +0.3 5,473,437 + +1.2 5,473,437 + +0.9 5,473,437 + -0.7 5,473,438 - -0.3 5,473,438 - +0.6 5,473,438 - +0.6 5,473,438 - -0.1 5,473,438 - +0.5 5,473,438 - -0.2 5,473,438 - -0.5 5,473,438 - -0.5 5,473,438 - -0.5 5,473,501 + +0.9 5,473,525 + AO353_24825 0.11 -1.3 5,473,525 + AO353_24825 0.11 +0.7 5,473,525 + AO353_24825 0.11 -2.5 5,473,526 - AO353_24825 0.11 +0.9 5,473,559 + AO353_24825 0.13 +0.7 5,473,559 + AO353_24825 0.13 +0.4 5,473,559 + AO353_24825 0.13 +1.7 5,473,560 - AO353_24825 0.13 -0.9 5,473,560 - AO353_24825 0.13 +0.5 5,473,560 - AO353_24825 0.13 -0.4 5,473,560 - AO353_24825 0.13 +0.5 5,473,594 - AO353_24825 0.15 +0.7 5,473,594 - AO353_24825 0.15 -0.8 5,473,677 - AO353_24825 0.21 +1.2 5,473,842 - AO353_24825 0.33 +1.2 5,473,999 - AO353_24825 0.44 +0.3 5,474,025 - AO353_24825 0.46 -0.5 5,474,135 + AO353_24825 0.54 -0.8 5,474,151 + AO353_24825 0.55 +0.8 5,474,152 - AO353_24825 0.55 +0.5
Or see this region's nucleotide sequence