Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24390 and AO353_24395 are separated by 44 nucleotides AO353_24395 and AO353_24400 are separated by 301 nucleotides AO353_24400 and AO353_24405 are separated by 52 nucleotides AO353_24405 and AO353_24410 are separated by 277 nucleotides
AO353_24390: AO353_24390 - NADH:flavin oxidoreductase, at 5,363,425 to 5,364,567
_24390
AO353_24395: AO353_24395 - alkylhydroperoxidase, at 5,364,612 to 5,364,944
_24395
AO353_24400: AO353_24400 - ACP phosphodiesterase, at 5,365,246 to 5,365,851
_24400
AO353_24405: AO353_24405 - ArsR family transcriptional regulator, at 5,365,904 to 5,366,407
_24405
AO353_24410: AO353_24410 - amino acid ABC transporter substrate-binding protein, at 5,366,685 to 5,367,506
_24410
Position (kb) 5365
5366 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5364.258 kb on + strand, within AO353_24390 at 5364.259 kb on - strand, within AO353_24390 at 5364.259 kb on - strand, within AO353_24390 at 5364.259 kb on - strand, within AO353_24390 at 5364.259 kb on - strand, within AO353_24390 at 5364.307 kb on + strand, within AO353_24390 at 5364.308 kb on - strand, within AO353_24390 at 5364.308 kb on - strand, within AO353_24390 at 5364.308 kb on - strand, within AO353_24390 at 5364.353 kb on + strand, within AO353_24390 at 5364.353 kb on + strand, within AO353_24390 at 5364.354 kb on - strand, within AO353_24390 at 5364.368 kb on + strand, within AO353_24390 at 5364.368 kb on + strand, within AO353_24390 at 5364.368 kb on + strand, within AO353_24390 at 5364.369 kb on - strand, within AO353_24390 at 5364.369 kb on - strand, within AO353_24390 at 5364.369 kb on - strand at 5364.369 kb on - strand, within AO353_24390 at 5364.374 kb on + strand, within AO353_24390 at 5364.443 kb on + strand, within AO353_24390 at 5364.446 kb on + strand, within AO353_24390 at 5364.446 kb on + strand, within AO353_24390 at 5364.446 kb on + strand, within AO353_24390 at 5364.447 kb on - strand, within AO353_24390 at 5364.447 kb on - strand, within AO353_24390 at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.561 kb on + strand at 5364.562 kb on - strand at 5364.562 kb on - strand at 5364.562 kb on - strand at 5364.562 kb on - strand at 5364.562 kb on - strand at 5364.562 kb on - strand at 5364.562 kb on - strand at 5364.572 kb on - strand at 5364.572 kb on - strand at 5364.572 kb on - strand at 5364.613 kb on + strand at 5364.614 kb on - strand at 5364.614 kb on - strand at 5364.614 kb on - strand at 5364.647 kb on + strand, within AO353_24395 at 5364.648 kb on - strand, within AO353_24395 at 5364.649 kb on + strand, within AO353_24395 at 5364.649 kb on + strand, within AO353_24395 at 5364.649 kb on + strand, within AO353_24395 at 5364.649 kb on + strand, within AO353_24395 at 5364.650 kb on - strand, within AO353_24395 at 5364.650 kb on - strand, within AO353_24395 at 5364.650 kb on - strand, within AO353_24395 at 5364.650 kb on - strand, within AO353_24395 at 5364.650 kb on - strand, within AO353_24395 at 5364.685 kb on - strand, within AO353_24395 at 5364.713 kb on + strand, within AO353_24395 at 5364.713 kb on + strand at 5364.717 kb on + strand, within AO353_24395 at 5364.888 kb on - strand, within AO353_24395 at 5364.897 kb on + strand, within AO353_24395 at 5365.144 kb on + strand at 5365.227 kb on + strand at 5365.227 kb on + strand at 5365.227 kb on + strand at 5365.227 kb on + strand at 5365.227 kb on + strand at 5365.228 kb on - strand at 5365.228 kb on - strand at 5365.228 kb on - strand at 5365.234 kb on + strand at 5365.234 kb on + strand at 5365.234 kb on + strand at 5365.235 kb on - strand at 5365.252 kb on + strand at 5365.252 kb on + strand at 5365.253 kb on - strand at 5365.253 kb on - strand at 5365.323 kb on - strand, within AO353_24400 at 5365.399 kb on - strand, within AO353_24400 at 5365.399 kb on - strand, within AO353_24400 at 5365.499 kb on + strand, within AO353_24400 at 5365.559 kb on - strand, within AO353_24400 at 5365.645 kb on + strand, within AO353_24400 at 5365.697 kb on + strand, within AO353_24400 at 5365.726 kb on + strand, within AO353_24400 at 5365.726 kb on + strand, within AO353_24400 at 5365.747 kb on + strand, within AO353_24400 at 5365.748 kb on - strand, within AO353_24400 at 5365.905 kb on + strand at 5365.929 kb on - strand at 5366.032 kb on + strand, within AO353_24405 at 5366.055 kb on - strand, within AO353_24405 at 5366.168 kb on + strand, within AO353_24405 at 5366.278 kb on + strand, within AO353_24405 at 5366.279 kb on - strand, within AO353_24405 at 5366.279 kb on - strand, within AO353_24405 at 5366.367 kb on - strand at 5366.367 kb on - strand at 5366.409 kb on + strand at 5366.497 kb on + strand at 5366.506 kb on + strand at 5366.519 kb on + strand at 5366.520 kb on - strand at 5366.537 kb on + strand at 5366.538 kb on - strand at 5366.538 kb on - strand at 5366.616 kb on + strand at 5366.616 kb on + strand at 5366.678 kb on + strand at 5366.699 kb on + strand at 5366.699 kb on + strand at 5366.699 kb on + strand at 5366.700 kb on - strand at 5366.700 kb on - strand at 5366.700 kb on - strand at 5366.731 kb on + strand at 5366.731 kb on + strand at 5366.731 kb on + strand at 5366.731 kb on + strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.732 kb on - strand at 5366.734 kb on + strand at 5366.735 kb on - strand at 5366.735 kb on - strand at 5366.847 kb on + strand, within AO353_24410 at 5366.847 kb on + strand, within AO353_24410 at 5366.847 kb on + strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand at 5366.848 kb on - strand, within AO353_24410 at 5366.848 kb on - strand, within AO353_24410
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 5,364,258 + AO353_24390 0.73 -1.6 5,364,259 - AO353_24390 0.73 +1.2 5,364,259 - AO353_24390 0.73 -1.1 5,364,259 - AO353_24390 0.73 -0.8 5,364,259 - AO353_24390 0.73 -0.3 5,364,307 + AO353_24390 0.77 -0.6 5,364,308 - AO353_24390 0.77 -0.4 5,364,308 - AO353_24390 0.77 +0.1 5,364,308 - AO353_24390 0.77 +0.3 5,364,353 + AO353_24390 0.81 -1.2 5,364,353 + AO353_24390 0.81 -0.1 5,364,354 - AO353_24390 0.81 -0.4 5,364,368 + AO353_24390 0.83 -0.9 5,364,368 + AO353_24390 0.83 +1.5 5,364,368 + AO353_24390 0.83 -1.1 5,364,369 - AO353_24390 0.83 -0.4 5,364,369 - AO353_24390 0.83 +0.5 5,364,369 - -1.1 5,364,369 - AO353_24390 0.83 +0.0 5,364,374 + AO353_24390 0.83 -0.2 5,364,443 + AO353_24390 0.89 +0.9 5,364,446 + AO353_24390 0.89 -0.2 5,364,446 + AO353_24390 0.89 -0.5 5,364,446 + AO353_24390 0.89 +1.0 5,364,447 - AO353_24390 0.89 -0.5 5,364,447 - AO353_24390 0.89 +0.3 5,364,561 + +0.3 5,364,561 + -0.7 5,364,561 + -1.4 5,364,561 + -0.1 5,364,561 + -0.6 5,364,561 + -0.1 5,364,561 + +0.4 5,364,561 + +0.3 5,364,561 + -1.2 5,364,562 - +0.0 5,364,562 - +1.9 5,364,562 - -0.5 5,364,562 - -0.6 5,364,562 - -0.8 5,364,562 - +1.1 5,364,562 - -0.3 5,364,572 - -0.7 5,364,572 - -0.6 5,364,572 - -0.1 5,364,613 + +1.6 5,364,614 - +1.5 5,364,614 - -0.3 5,364,614 - -0.3 5,364,647 + AO353_24395 0.11 -0.8 5,364,648 - AO353_24395 0.11 -0.2 5,364,649 + AO353_24395 0.11 -2.3 5,364,649 + AO353_24395 0.11 -1.0 5,364,649 + AO353_24395 0.11 -1.8 5,364,649 + AO353_24395 0.11 +1.1 5,364,650 - AO353_24395 0.11 -0.5 5,364,650 - AO353_24395 0.11 -1.5 5,364,650 - AO353_24395 0.11 +0.6 5,364,650 - AO353_24395 0.11 +0.4 5,364,650 - AO353_24395 0.11 -0.2 5,364,685 - AO353_24395 0.22 -1.0 5,364,713 + AO353_24395 0.30 -1.4 5,364,713 + +0.3 5,364,717 + AO353_24395 0.32 -1.1 5,364,888 - AO353_24395 0.83 -0.3 5,364,897 + AO353_24395 0.86 +0.5 5,365,144 + -0.1 5,365,227 + -1.1 5,365,227 + +0.5 5,365,227 + -0.9 5,365,227 + -1.4 5,365,227 + +0.8 5,365,228 - -0.9 5,365,228 - -0.7 5,365,228 - +2.5 5,365,234 + +0.9 5,365,234 + -0.3 5,365,234 + -0.6 5,365,235 - +0.5 5,365,252 + +0.3 5,365,252 + +0.0 5,365,253 - -0.4 5,365,253 - -0.6 5,365,323 - AO353_24400 0.13 +0.1 5,365,399 - AO353_24400 0.25 +0.2 5,365,399 - AO353_24400 0.25 -0.6 5,365,499 + AO353_24400 0.42 -0.1 5,365,559 - AO353_24400 0.52 +1.1 5,365,645 + AO353_24400 0.66 +0.6 5,365,697 + AO353_24400 0.74 -1.2 5,365,726 + AO353_24400 0.79 +0.4 5,365,726 + AO353_24400 0.79 +0.8 5,365,747 + AO353_24400 0.83 +0.5 5,365,748 - AO353_24400 0.83 +0.1 5,365,905 + +0.3 5,365,929 - +0.3 5,366,032 + AO353_24405 0.25 -0.5 5,366,055 - AO353_24405 0.30 -1.0 5,366,168 + AO353_24405 0.52 -0.1 5,366,278 + AO353_24405 0.74 +0.6 5,366,279 - AO353_24405 0.74 +1.3 5,366,279 - AO353_24405 0.74 -0.3 5,366,367 - +0.2 5,366,367 - +0.7 5,366,409 + +0.1 5,366,497 + -0.7 5,366,506 + -0.1 5,366,519 + -0.4 5,366,520 - -0.7 5,366,537 + -1.3 5,366,538 - -0.1 5,366,538 - +0.9 5,366,616 + +0.5 5,366,616 + +1.5 5,366,678 + +0.1 5,366,699 + -0.4 5,366,699 + +0.3 5,366,699 + -2.4 5,366,700 - -0.9 5,366,700 - -2.1 5,366,700 - -0.9 5,366,731 + -1.2 5,366,731 + -0.0 5,366,731 + +0.4 5,366,731 + +0.1 5,366,732 - +0.4 5,366,732 - -0.3 5,366,732 - +1.3 5,366,732 - -0.8 5,366,732 - +0.1 5,366,732 - -0.9 5,366,734 + +1.7 5,366,735 - -0.2 5,366,735 - -0.6 5,366,847 + AO353_24410 0.20 -0.3 5,366,847 + AO353_24410 0.20 +1.2 5,366,847 + AO353_24410 0.20 +0.6 5,366,848 - AO353_24410 0.20 +0.2 5,366,848 - AO353_24410 0.20 -0.2 5,366,848 - AO353_24410 0.20 +0.4 5,366,848 - +0.3 5,366,848 - AO353_24410 0.20 -1.1 5,366,848 - AO353_24410 0.20 -0.9
Or see this region's nucleotide sequence