Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_23590

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_23585 and AO353_23590 are separated by 96 nucleotidesAO353_23590 and AO353_23595 are separated by 34 nucleotides AO353_23585: AO353_23585 - hypothetical protein, at 5,164,128 to 5,165,231 _23585 AO353_23590: AO353_23590 - ArsR family transcriptional regulator, at 5,165,328 to 5,165,675 _23590 AO353_23595: AO353_23595 - arsenic transporter, at 5,165,710 to 5,166,993 _23595 Position (kb) 5165 5166Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5164.419 kb on + strand, within AO353_23585at 5164.420 kb on - strand, within AO353_23585at 5164.425 kb on + strand, within AO353_23585at 5164.425 kb on + strandat 5164.425 kb on + strand, within AO353_23585at 5164.524 kb on + strand, within AO353_23585at 5164.534 kb on - strand, within AO353_23585at 5164.557 kb on + strand, within AO353_23585at 5164.558 kb on - strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.560 kb on + strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.561 kb on - strand, within AO353_23585at 5164.595 kb on + strand, within AO353_23585at 5164.857 kb on + strand, within AO353_23585at 5164.857 kb on + strand, within AO353_23585at 5164.857 kb on + strand, within AO353_23585at 5164.857 kb on + strand, within AO353_23585at 5164.857 kb on + strand, within AO353_23585at 5164.857 kb on + strand, within AO353_23585at 5164.857 kb on + strand, within AO353_23585at 5164.858 kb on - strand, within AO353_23585at 5164.858 kb on - strand, within AO353_23585at 5164.858 kb on - strand, within AO353_23585at 5164.858 kb on - strand, within AO353_23585at 5164.886 kb on - strand, within AO353_23585at 5164.927 kb on - strand, within AO353_23585at 5164.927 kb on - strand, within AO353_23585at 5164.939 kb on + strand, within AO353_23585at 5164.939 kb on + strand, within AO353_23585at 5164.939 kb on + strand, within AO353_23585at 5164.940 kb on - strand, within AO353_23585at 5164.940 kb on - strand, within AO353_23585at 5164.940 kb on - strand, within AO353_23585at 5164.980 kb on - strand, within AO353_23585at 5164.980 kb on - strand, within AO353_23585at 5164.980 kb on - strand, within AO353_23585at 5164.980 kb on - strand, within AO353_23585at 5165.094 kb on + strand, within AO353_23585at 5165.229 kb on + strandat 5165.229 kb on + strandat 5165.230 kb on - strandat 5165.230 kb on - strandat 5165.230 kb on - strandat 5165.230 kb on - strandat 5165.275 kb on - strandat 5165.292 kb on + strandat 5165.292 kb on + strandat 5165.293 kb on - strandat 5165.391 kb on - strand, within AO353_23590at 5165.541 kb on + strand, within AO353_23590at 5165.542 kb on - strand, within AO353_23590at 5165.561 kb on - strand, within AO353_23590at 5165.561 kb on - strand, within AO353_23590at 5165.639 kb on - strand, within AO353_23590at 5165.717 kb on + strandat 5165.856 kb on - strand, within AO353_23595at 5165.990 kb on + strand, within AO353_23595at 5165.991 kb on - strand, within AO353_23595at 5165.991 kb on - strand, within AO353_23595at 5165.998 kb on + strand, within AO353_23595at 5165.998 kb on + strand, within AO353_23595at 5165.999 kb on - strand, within AO353_23595at 5165.999 kb on - strand, within AO353_23595at 5165.999 kb on - strand, within AO353_23595at 5166.194 kb on + strand, within AO353_23595at 5166.194 kb on + strand, within AO353_23595at 5166.194 kb on + strand, within AO353_23595at 5166.195 kb on - strand, within AO353_23595at 5166.195 kb on - strand, within AO353_23595at 5166.195 kb on - strand, within AO353_23595at 5166.195 kb on - strand, within AO353_23595at 5166.195 kb on - strand, within AO353_23595at 5166.325 kb on + strand, within AO353_23595at 5166.326 kb on - strand, within AO353_23595at 5166.326 kb on - strand, within AO353_23595at 5166.471 kb on - strand, within AO353_23595at 5166.577 kb on + strand, within AO353_23595at 5166.577 kb on + strand, within AO353_23595at 5166.577 kb on + strand, within AO353_23595at 5166.577 kb on + strand, within AO353_23595at 5166.578 kb on - strand, within AO353_23595at 5166.578 kb on - strand, within AO353_23595at 5166.578 kb on - strand, within AO353_23595at 5166.590 kb on - strandat 5166.600 kb on + strand, within AO353_23595at 5166.619 kb on + strand, within AO353_23595at 5166.619 kb on + strand, within AO353_23595at 5166.620 kb on - strand, within AO353_23595at 5166.620 kb on - strand, within AO353_23595

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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5,164,419 + AO353_23585 0.26 +1.4
5,164,420 - AO353_23585 0.26 +0.8
5,164,425 + AO353_23585 0.27 +0.4
5,164,425 + +1.9
5,164,425 + AO353_23585 0.27 -0.4
5,164,524 + AO353_23585 0.36 -0.4
5,164,534 - AO353_23585 0.37 -0.1
5,164,557 + AO353_23585 0.39 -0.1
5,164,558 - AO353_23585 0.39 +0.1
5,164,560 + AO353_23585 0.39 +0.0
5,164,560 + AO353_23585 0.39 +0.9
5,164,560 + AO353_23585 0.39 -0.6
5,164,560 + AO353_23585 0.39 -0.5
5,164,560 + AO353_23585 0.39 +2.5
5,164,560 + AO353_23585 0.39 +0.7
5,164,560 + AO353_23585 0.39 +0.1
5,164,560 + AO353_23585 0.39 -1.4
5,164,560 + AO353_23585 0.39 +0.5
5,164,561 - AO353_23585 0.39 +0.5
5,164,561 - AO353_23585 0.39 +0.4
5,164,561 - AO353_23585 0.39 -0.4
5,164,561 - AO353_23585 0.39 +0.9
5,164,561 - AO353_23585 0.39 -0.8
5,164,561 - AO353_23585 0.39 +0.5
5,164,561 - AO353_23585 0.39 -0.9
5,164,561 - AO353_23585 0.39 -0.9
5,164,595 + AO353_23585 0.42 +0.6
5,164,857 + AO353_23585 0.66 -0.8
5,164,857 + AO353_23585 0.66 +1.8
5,164,857 + AO353_23585 0.66 -1.2
5,164,857 + AO353_23585 0.66 +0.9
5,164,857 + AO353_23585 0.66 -0.1
5,164,857 + AO353_23585 0.66 -1.9
5,164,857 + AO353_23585 0.66 +0.9
5,164,858 - AO353_23585 0.66 +0.9
5,164,858 - AO353_23585 0.66 +0.7
5,164,858 - AO353_23585 0.66 +0.5
5,164,858 - AO353_23585 0.66 +0.1
5,164,886 - AO353_23585 0.69 +0.5
5,164,927 - AO353_23585 0.72 -1.1
5,164,927 - AO353_23585 0.72 -1.6
5,164,939 + AO353_23585 0.73 -0.8
5,164,939 + AO353_23585 0.73 +1.4
5,164,939 + AO353_23585 0.73 +0.9
5,164,940 - AO353_23585 0.74 +0.9
5,164,940 - AO353_23585 0.74 +0.5
5,164,940 - AO353_23585 0.74 +0.5
5,164,980 - AO353_23585 0.77 -0.2
5,164,980 - AO353_23585 0.77 +0.5
5,164,980 - AO353_23585 0.77 -0.2
5,164,980 - AO353_23585 0.77 +0.0
5,165,094 + AO353_23585 0.88 +0.3
5,165,229 + +0.2
5,165,229 + +0.6
5,165,230 - -3.1
5,165,230 - +0.5
5,165,230 - -0.1
5,165,230 - +1.1
5,165,275 - +0.8
5,165,292 + +0.1
5,165,292 + -0.4
5,165,293 - +0.2
5,165,391 - AO353_23590 0.18 +0.9
5,165,541 + AO353_23590 0.61 -0.1
5,165,542 - AO353_23590 0.61 -0.3
5,165,561 - AO353_23590 0.67 +0.6
5,165,561 - AO353_23590 0.67 -1.2
5,165,639 - AO353_23590 0.89 +0.6
5,165,717 + -0.4
5,165,856 - AO353_23595 0.11 -1.1
5,165,990 + AO353_23595 0.22 -1.2
5,165,991 - AO353_23595 0.22 -0.4
5,165,991 - AO353_23595 0.22 -0.6
5,165,998 + AO353_23595 0.22 -0.2
5,165,998 + AO353_23595 0.22 -0.5
5,165,999 - AO353_23595 0.23 -1.2
5,165,999 - AO353_23595 0.23 -0.4
5,165,999 - AO353_23595 0.23 +0.5
5,166,194 + AO353_23595 0.38 +0.2
5,166,194 + AO353_23595 0.38 -1.2
5,166,194 + AO353_23595 0.38 +0.1
5,166,195 - AO353_23595 0.38 -0.4
5,166,195 - AO353_23595 0.38 -0.4
5,166,195 - AO353_23595 0.38 +1.2
5,166,195 - AO353_23595 0.38 +0.5
5,166,195 - AO353_23595 0.38 -1.6
5,166,325 + AO353_23595 0.48 +0.5
5,166,326 - AO353_23595 0.48 -1.1
5,166,326 - AO353_23595 0.48 +0.1
5,166,471 - AO353_23595 0.59 -0.1
5,166,577 + AO353_23595 0.68 -0.8
5,166,577 + AO353_23595 0.68 +0.3
5,166,577 + AO353_23595 0.68 -0.4
5,166,577 + AO353_23595 0.68 +0.7
5,166,578 - AO353_23595 0.68 -1.9
5,166,578 - AO353_23595 0.68 -0.6
5,166,578 - AO353_23595 0.68 +0.1
5,166,590 - +0.9
5,166,600 + AO353_23595 0.69 +0.4
5,166,619 + AO353_23595 0.71 -0.2
5,166,619 + AO353_23595 0.71 -0.1
5,166,620 - AO353_23595 0.71 -0.1
5,166,620 - AO353_23595 0.71 -1.4

Or see this region's nucleotide sequence