Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22865 and AO353_22870 overlap by 4 nucleotides AO353_22870 and AO353_22875 are separated by 77 nucleotides
AO353_22865: AO353_22865 - sulfite reductase, at 5,012,113 to 5,013,786
_22865
AO353_22870: AO353_22870 - oxidoreductase, at 5,013,783 to 5,014,277
_22870
AO353_22875: AO353_22875 - cell envelope protein, at 5,014,355 to 5,015,761
_22875
Position (kb) 5013
5014
5015 Strain fitness (log2 ratio) -2
-1
0
1 at 5012.798 kb on - strand, within AO353_22865 at 5012.798 kb on - strand, within AO353_22865 at 5012.822 kb on - strand, within AO353_22865 at 5012.851 kb on + strand, within AO353_22865 at 5012.851 kb on + strand, within AO353_22865 at 5012.851 kb on + strand, within AO353_22865 at 5012.851 kb on + strand, within AO353_22865 at 5012.851 kb on + strand, within AO353_22865 at 5012.852 kb on - strand, within AO353_22865 at 5012.852 kb on - strand, within AO353_22865 at 5012.852 kb on - strand, within AO353_22865 at 5013.004 kb on + strand, within AO353_22865 at 5013.004 kb on + strand, within AO353_22865 at 5013.004 kb on + strand, within AO353_22865 at 5013.005 kb on - strand, within AO353_22865 at 5013.005 kb on - strand, within AO353_22865 at 5013.005 kb on - strand, within AO353_22865 at 5013.005 kb on - strand, within AO353_22865 at 5013.005 kb on - strand, within AO353_22865 at 5013.104 kb on + strand, within AO353_22865 at 5013.105 kb on - strand, within AO353_22865 at 5013.105 kb on - strand, within AO353_22865 at 5013.105 kb on - strand, within AO353_22865 at 5013.105 kb on - strand, within AO353_22865 at 5013.105 kb on - strand, within AO353_22865 at 5013.113 kb on - strand, within AO353_22865 at 5013.445 kb on + strand, within AO353_22865 at 5013.446 kb on - strand, within AO353_22865 at 5013.645 kb on - strand at 5013.788 kb on + strand at 5013.788 kb on + strand at 5013.788 kb on + strand at 5013.788 kb on + strand at 5013.788 kb on + strand at 5013.789 kb on - strand at 5013.789 kb on - strand at 5013.821 kb on + strand at 5013.822 kb on - strand at 5013.822 kb on - strand at 5014.003 kb on + strand, within AO353_22870 at 5014.050 kb on + strand, within AO353_22870 at 5014.050 kb on + strand, within AO353_22870 at 5014.062 kb on + strand, within AO353_22870 at 5014.062 kb on + strand, within AO353_22870 at 5014.062 kb on + strand, within AO353_22870 at 5014.062 kb on + strand, within AO353_22870 at 5014.063 kb on - strand, within AO353_22870 at 5014.230 kb on + strand at 5014.231 kb on - strand at 5014.282 kb on + strand at 5014.282 kb on + strand at 5014.282 kb on + strand at 5014.283 kb on - strand at 5014.283 kb on - strand at 5014.343 kb on + strand at 5014.343 kb on + strand at 5014.344 kb on - strand at 5014.346 kb on + strand at 5014.347 kb on - strand at 5014.347 kb on - strand at 5014.347 kb on - strand at 5014.356 kb on + strand at 5014.422 kb on + strand at 5014.422 kb on + strand at 5014.422 kb on + strand at 5014.573 kb on - strand, within AO353_22875 at 5014.617 kb on + strand, within AO353_22875 at 5014.617 kb on + strand, within AO353_22875 at 5014.617 kb on + strand, within AO353_22875 at 5014.618 kb on - strand, within AO353_22875 at 5014.618 kb on - strand, within AO353_22875 at 5014.618 kb on - strand, within AO353_22875 at 5014.618 kb on - strand, within AO353_22875 at 5014.618 kb on - strand, within AO353_22875 at 5014.618 kb on - strand, within AO353_22875 at 5014.680 kb on + strand at 5014.680 kb on + strand, within AO353_22875 at 5014.680 kb on + strand, within AO353_22875 at 5014.680 kb on + strand, within AO353_22875 at 5014.680 kb on + strand, within AO353_22875 at 5014.680 kb on + strand, within AO353_22875 at 5014.681 kb on - strand, within AO353_22875 at 5014.681 kb on - strand, within AO353_22875 at 5014.681 kb on - strand, within AO353_22875 at 5014.681 kb on - strand, within AO353_22875 at 5014.729 kb on - strand, within AO353_22875 at 5014.729 kb on - strand, within AO353_22875 at 5014.800 kb on + strand, within AO353_22875 at 5014.800 kb on + strand, within AO353_22875 at 5014.800 kb on + strand, within AO353_22875 at 5014.800 kb on + strand, within AO353_22875 at 5014.800 kb on + strand, within AO353_22875 at 5014.800 kb on + strand, within AO353_22875 at 5014.800 kb on + strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.801 kb on - strand, within AO353_22875 at 5014.887 kb on + strand, within AO353_22875 at 5014.887 kb on + strand, within AO353_22875 at 5014.951 kb on + strand, within AO353_22875 at 5014.952 kb on - strand, within AO353_22875 at 5014.952 kb on - strand, within AO353_22875 at 5015.146 kb on - strand, within AO353_22875 at 5015.146 kb on - strand, within AO353_22875 at 5015.170 kb on - strand, within AO353_22875 at 5015.170 kb on - strand, within AO353_22875 at 5015.246 kb on - strand, within AO353_22875 at 5015.257 kb on + strand, within AO353_22875 at 5015.258 kb on - strand, within AO353_22875 at 5015.261 kb on + strand, within AO353_22875 at 5015.261 kb on + strand, within AO353_22875 at 5015.262 kb on - strand, within AO353_22875
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 5,012,798 - AO353_22865 0.41 +0.8 5,012,798 - AO353_22865 0.41 +0.3 5,012,822 - AO353_22865 0.42 +0.0 5,012,851 + AO353_22865 0.44 -1.2 5,012,851 + AO353_22865 0.44 -1.0 5,012,851 + AO353_22865 0.44 -0.7 5,012,851 + AO353_22865 0.44 -0.8 5,012,851 + AO353_22865 0.44 +1.0 5,012,852 - AO353_22865 0.44 +0.0 5,012,852 - AO353_22865 0.44 -2.6 5,012,852 - AO353_22865 0.44 -1.6 5,013,004 + AO353_22865 0.53 +0.2 5,013,004 + AO353_22865 0.53 -0.6 5,013,004 + AO353_22865 0.53 -0.7 5,013,005 - AO353_22865 0.53 +1.0 5,013,005 - AO353_22865 0.53 -0.6 5,013,005 - AO353_22865 0.53 +1.0 5,013,005 - AO353_22865 0.53 -1.1 5,013,005 - AO353_22865 0.53 -1.6 5,013,104 + AO353_22865 0.59 -1.8 5,013,105 - AO353_22865 0.59 +1.2 5,013,105 - AO353_22865 0.59 -0.7 5,013,105 - AO353_22865 0.59 -1.0 5,013,105 - AO353_22865 0.59 -1.6 5,013,105 - AO353_22865 0.59 +0.0 5,013,113 - AO353_22865 0.60 +0.2 5,013,445 + AO353_22865 0.80 -1.3 5,013,446 - AO353_22865 0.80 +1.0 5,013,645 - -0.4 5,013,788 + +0.3 5,013,788 + -0.9 5,013,788 + +0.6 5,013,788 + -1.2 5,013,788 + -1.0 5,013,789 - -1.4 5,013,789 - +0.1 5,013,821 + -0.8 5,013,822 - +0.0 5,013,822 - -0.6 5,014,003 + AO353_22870 0.44 -0.7 5,014,050 + AO353_22870 0.54 +0.4 5,014,050 + AO353_22870 0.54 +1.5 5,014,062 + AO353_22870 0.56 +1.4 5,014,062 + AO353_22870 0.56 -1.2 5,014,062 + AO353_22870 0.56 +0.7 5,014,062 + AO353_22870 0.56 +1.2 5,014,063 - AO353_22870 0.57 +1.0 5,014,230 + -2.2 5,014,231 - +0.3 5,014,282 + -0.9 5,014,282 + -1.4 5,014,282 + +0.3 5,014,283 - +0.6 5,014,283 - +0.0 5,014,343 + -0.5 5,014,343 + +0.2 5,014,344 - +0.0 5,014,346 + -1.4 5,014,347 - +0.2 5,014,347 - +0.3 5,014,347 - +0.0 5,014,356 + +0.2 5,014,422 + -0.6 5,014,422 + +0.2 5,014,422 + -1.0 5,014,573 - AO353_22875 0.15 -2.0 5,014,617 + AO353_22875 0.19 -1.3 5,014,617 + AO353_22875 0.19 -0.2 5,014,617 + AO353_22875 0.19 +1.1 5,014,618 - AO353_22875 0.19 +0.1 5,014,618 - AO353_22875 0.19 -0.4 5,014,618 - AO353_22875 0.19 +0.6 5,014,618 - AO353_22875 0.19 +0.7 5,014,618 - AO353_22875 0.19 +0.4 5,014,618 - AO353_22875 0.19 +0.7 5,014,680 + +0.0 5,014,680 + AO353_22875 0.23 -0.3 5,014,680 + AO353_22875 0.23 +0.3 5,014,680 + AO353_22875 0.23 -1.4 5,014,680 + AO353_22875 0.23 -0.3 5,014,680 + AO353_22875 0.23 -0.3 5,014,681 - AO353_22875 0.23 -0.9 5,014,681 - AO353_22875 0.23 -0.8 5,014,681 - AO353_22875 0.23 -0.1 5,014,681 - AO353_22875 0.23 +0.0 5,014,729 - AO353_22875 0.27 +1.0 5,014,729 - AO353_22875 0.27 -1.6 5,014,800 + AO353_22875 0.32 +0.2 5,014,800 + AO353_22875 0.32 -1.2 5,014,800 + AO353_22875 0.32 -0.8 5,014,800 + AO353_22875 0.32 +1.1 5,014,800 + AO353_22875 0.32 +0.5 5,014,800 + AO353_22875 0.32 -0.5 5,014,800 + AO353_22875 0.32 +0.0 5,014,801 - AO353_22875 0.32 +0.8 5,014,801 - AO353_22875 0.32 +0.6 5,014,801 - AO353_22875 0.32 +0.8 5,014,801 - AO353_22875 0.32 +1.5 5,014,801 - AO353_22875 0.32 -0.6 5,014,801 - AO353_22875 0.32 -0.4 5,014,801 - AO353_22875 0.32 -1.0 5,014,801 - AO353_22875 0.32 +0.6 5,014,801 - AO353_22875 0.32 -0.4 5,014,887 + AO353_22875 0.38 -0.4 5,014,887 + AO353_22875 0.38 -0.8 5,014,951 + AO353_22875 0.42 -0.9 5,014,952 - AO353_22875 0.42 +1.6 5,014,952 - AO353_22875 0.42 +0.1 5,015,146 - AO353_22875 0.56 +0.1 5,015,146 - AO353_22875 0.56 +1.3 5,015,170 - AO353_22875 0.58 +0.4 5,015,170 - AO353_22875 0.58 +0.0 5,015,246 - AO353_22875 0.63 -0.5 5,015,257 + AO353_22875 0.64 +0.0 5,015,258 - AO353_22875 0.64 -1.2 5,015,261 + AO353_22875 0.64 -0.3 5,015,261 + AO353_22875 0.64 -1.0 5,015,262 - AO353_22875 0.64 +0.7
Or see this region's nucleotide sequence