Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22030 and AO353_22035 are separated by 88 nucleotides AO353_22035 and AO353_22040 are separated by 100 nucleotides AO353_22040 and AO353_22045 overlap by 4 nucleotides
AO353_22030: AO353_22030 - transcriptional regulator, at 4,824,379 to 4,825,908
_22030
AO353_22035: AO353_22035 - pyridoxine 5'-phosphate oxidase, at 4,825,997 to 4,826,644
_22035
AO353_22040: AO353_22040 - molybdenum cofactor biosynthesis protein B, at 4,826,745 to 4,827,299
_22040
AO353_22045: AO353_22045 - molybdenum cofactor biosynthesis protein MoaA, at 4,827,296 to 4,828,531
_22045
Position (kb)
4825
4826
4827 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4825.091 kb on + strand, within AO353_22030 at 4825.405 kb on + strand, within AO353_22030 at 4825.423 kb on + strand, within AO353_22030 at 4825.564 kb on + strand, within AO353_22030 at 4825.564 kb on + strand, within AO353_22030 at 4825.565 kb on - strand, within AO353_22030 at 4825.565 kb on - strand, within AO353_22030 at 4825.565 kb on - strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.566 kb on + strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.567 kb on - strand, within AO353_22030 at 4825.692 kb on + strand, within AO353_22030 at 4825.902 kb on + strand at 4825.902 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.906 kb on + strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4825.907 kb on - strand at 4826.027 kb on - strand at 4826.030 kb on + strand at 4826.030 kb on + strand at 4826.030 kb on + strand at 4826.030 kb on + strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.031 kb on - strand at 4826.047 kb on - strand at 4826.140 kb on + strand, within AO353_22035 at 4826.141 kb on - strand, within AO353_22035 at 4826.141 kb on - strand, within AO353_22035 at 4826.225 kb on - strand, within AO353_22035 at 4826.240 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.326 kb on + strand, within AO353_22035 at 4826.372 kb on + strand, within AO353_22035 at 4826.372 kb on + strand, within AO353_22035 at 4826.373 kb on - strand, within AO353_22035 at 4826.650 kb on + strand at 4826.650 kb on + strand at 4826.650 kb on + strand at 4826.650 kb on + strand at 4826.651 kb on - strand at 4826.667 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.683 kb on + strand at 4826.684 kb on - strand at 4826.684 kb on - strand at 4826.728 kb on + strand at 4826.728 kb on + strand at 4826.728 kb on + strand at 4826.807 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.906 kb on + strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040 at 4826.907 kb on - strand, within AO353_22040 at 4826.910 kb on + strand, within AO353_22040 at 4826.910 kb on + strand, within AO353_22040 at 4826.911 kb on - strand, within AO353_22040 at 4826.911 kb on - strand, within AO353_22040 at 4826.911 kb on - strand, within AO353_22040 at 4826.911 kb on - strand, within AO353_22040 at 4826.929 kb on + strand, within AO353_22040 at 4826.929 kb on + strand, within AO353_22040 at 4826.930 kb on - strand, within AO353_22040 at 4826.965 kb on + strand, within AO353_22040 at 4826.966 kb on - strand, within AO353_22040 at 4826.966 kb on - strand, within AO353_22040 at 4826.966 kb on - strand, within AO353_22040 at 4826.966 kb on - strand, within AO353_22040 at 4826.966 kb on - strand, within AO353_22040 at 4827.005 kb on + strand, within AO353_22040 at 4827.006 kb on - strand, within AO353_22040 at 4827.488 kb on + strand, within AO353_22045
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 4,825,091 + AO353_22030 0.47 -0.0 4,825,405 + AO353_22030 0.67 -1.2 4,825,423 + AO353_22030 0.68 +0.1 4,825,564 + AO353_22030 0.77 -0.2 4,825,564 + AO353_22030 0.77 -0.5 4,825,565 - AO353_22030 0.78 -0.2 4,825,565 - AO353_22030 0.78 +0.5 4,825,565 - AO353_22030 0.78 -0.3 4,825,566 + AO353_22030 0.78 -1.4 4,825,566 + AO353_22030 0.78 +0.2 4,825,566 + AO353_22030 0.78 +0.2 4,825,566 + AO353_22030 0.78 -1.6 4,825,567 - AO353_22030 0.78 -0.3 4,825,567 - AO353_22030 0.78 -0.9 4,825,567 - AO353_22030 0.78 -1.3 4,825,567 - AO353_22030 0.78 +0.5 4,825,692 + AO353_22030 0.86 +0.5 4,825,902 + +0.5 4,825,902 + +1.1 4,825,906 + +0.1 4,825,906 + +0.5 4,825,906 + -1.7 4,825,906 + +0.8 4,825,906 + -1.3 4,825,906 + -0.1 4,825,906 + +1.7 4,825,906 + +0.2 4,825,907 - -0.8 4,825,907 - +0.1 4,825,907 - +0.3 4,825,907 - -1.2 4,825,907 - -0.8 4,825,907 - -0.1 4,826,027 - -0.9 4,826,030 + -1.4 4,826,030 + -0.4 4,826,030 + +0.1 4,826,030 + +0.7 4,826,031 - +0.6 4,826,031 - +0.1 4,826,031 - -0.1 4,826,031 - -1.3 4,826,031 - +0.3 4,826,031 - +1.4 4,826,047 - -1.4 4,826,140 + AO353_22035 0.22 -0.3 4,826,141 - AO353_22035 0.22 +0.8 4,826,141 - AO353_22035 0.22 +0.3 4,826,225 - AO353_22035 0.35 -0.7 4,826,240 + AO353_22035 0.38 -0.1 4,826,326 + AO353_22035 0.51 +0.2 4,826,326 + AO353_22035 0.51 +0.9 4,826,326 + AO353_22035 0.51 -0.9 4,826,326 + AO353_22035 0.51 +0.2 4,826,326 + AO353_22035 0.51 +0.4 4,826,372 + AO353_22035 0.58 +1.4 4,826,372 + AO353_22035 0.58 +0.3 4,826,373 - AO353_22035 0.58 +0.9 4,826,650 + +3.1 4,826,650 + -0.5 4,826,650 + +0.3 4,826,650 + -1.1 4,826,651 - +1.6 4,826,667 + +0.8 4,826,683 + -1.3 4,826,683 + -0.4 4,826,683 + -0.3 4,826,683 + -0.5 4,826,683 + -0.6 4,826,684 - -0.5 4,826,684 - -0.9 4,826,728 + +0.6 4,826,728 + -0.2 4,826,728 + +1.3 4,826,807 + AO353_22040 0.11 -1.3 4,826,906 + AO353_22040 0.29 -1.6 4,826,906 + AO353_22040 0.29 -0.4 4,826,906 + AO353_22040 0.29 +0.7 4,826,906 + AO353_22040 0.29 -1.7 4,826,906 + AO353_22040 0.29 -0.4 4,826,906 + AO353_22040 0.29 -0.2 4,826,906 + AO353_22040 0.29 -0.9 4,826,906 + AO353_22040 0.29 -1.2 4,826,906 + AO353_22040 0.29 +2.3 4,826,907 - AO353_22040 0.29 +1.9 4,826,907 - AO353_22040 0.29 -0.0 4,826,907 - AO353_22040 0.29 +1.4 4,826,907 - AO353_22040 0.29 +0.2 4,826,910 + AO353_22040 0.30 -1.5 4,826,910 + AO353_22040 0.30 -0.5 4,826,911 - AO353_22040 0.30 +1.1 4,826,911 - AO353_22040 0.30 +0.7 4,826,911 - AO353_22040 0.30 +0.5 4,826,911 - AO353_22040 0.30 +0.7 4,826,929 + AO353_22040 0.33 -1.5 4,826,929 + AO353_22040 0.33 -2.1 4,826,930 - AO353_22040 0.33 +0.1 4,826,965 + AO353_22040 0.40 -0.1 4,826,966 - AO353_22040 0.40 -1.3 4,826,966 - AO353_22040 0.40 -1.2 4,826,966 - AO353_22040 0.40 -0.5 4,826,966 - AO353_22040 0.40 -0.8 4,826,966 - AO353_22040 0.40 -0.5 4,827,005 + AO353_22040 0.47 -0.7 4,827,006 - AO353_22040 0.47 -0.5 4,827,488 + AO353_22045 0.16 +0.1
Or see this region's nucleotide sequence