Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18760 and AO353_18765 are separated by 554 nucleotides AO353_18765 and AO353_18770 are separated by 420 nucleotides
AO353_18760: AO353_18760 - flagellar biosynthetic protein FlhB, at 4,124,476 to 4,125,615
_18760
AO353_18765: AO353_18765 - hypothetical protein, at 4,126,170 to 4,126,409
_18765
AO353_18770: AO353_18770 - flagellar biosynthesis protein FlhA, at 4,126,830 to 4,128,959
_18770
Position (kb) 4126
4127 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4125.313 kb on + strand, within AO353_18760 at 4125.313 kb on + strand, within AO353_18760 at 4125.313 kb on + strand, within AO353_18760 at 4125.313 kb on + strand, within AO353_18760 at 4125.313 kb on + strand, within AO353_18760 at 4125.313 kb on + strand, within AO353_18760 at 4125.313 kb on + strand, within AO353_18760 at 4125.314 kb on - strand, within AO353_18760 at 4125.314 kb on - strand, within AO353_18760 at 4125.314 kb on - strand, within AO353_18760 at 4125.399 kb on + strand, within AO353_18760 at 4125.400 kb on - strand, within AO353_18760 at 4125.445 kb on + strand, within AO353_18760 at 4125.445 kb on + strand, within AO353_18760 at 4125.446 kb on - strand, within AO353_18760 at 4125.446 kb on - strand, within AO353_18760 at 4125.446 kb on - strand, within AO353_18760 at 4125.449 kb on - strand, within AO353_18760 at 4125.449 kb on - strand, within AO353_18760 at 4125.449 kb on - strand, within AO353_18760 at 4125.449 kb on - strand, within AO353_18760 at 4125.449 kb on - strand, within AO353_18760 at 4125.487 kb on + strand, within AO353_18760 at 4125.487 kb on + strand, within AO353_18760 at 4125.487 kb on + strand, within AO353_18760 at 4125.487 kb on + strand, within AO353_18760 at 4125.514 kb on + strand at 4125.514 kb on + strand at 4125.515 kb on - strand at 4125.515 kb on - strand at 4125.520 kb on + strand at 4125.570 kb on + strand at 4125.622 kb on + strand at 4125.622 kb on + strand at 4125.622 kb on + strand at 4125.622 kb on + strand at 4125.622 kb on + strand at 4125.622 kb on + strand at 4125.623 kb on - strand at 4125.623 kb on - strand at 4125.623 kb on - strand at 4125.693 kb on + strand at 4125.693 kb on + strand at 4125.693 kb on + strand at 4125.693 kb on + strand at 4125.693 kb on + strand at 4125.693 kb on + strand at 4125.694 kb on - strand at 4125.694 kb on - strand at 4125.694 kb on - strand at 4125.694 kb on - strand at 4125.694 kb on - strand at 4125.694 kb on - strand at 4125.694 kb on - strand at 4125.695 kb on + strand at 4125.695 kb on + strand at 4125.695 kb on + strand at 4125.695 kb on + strand at 4125.695 kb on + strand at 4125.695 kb on + strand at 4125.696 kb on - strand at 4125.696 kb on - strand at 4125.797 kb on + strand at 4125.797 kb on + strand at 4126.123 kb on + strand at 4126.123 kb on + strand at 4126.123 kb on + strand at 4126.123 kb on + strand at 4126.123 kb on + strand at 4126.123 kb on + strand at 4126.123 kb on + strand at 4126.123 kb on + strand at 4126.124 kb on - strand at 4126.124 kb on - strand at 4126.124 kb on - strand at 4126.124 kb on - strand at 4126.124 kb on - strand at 4126.124 kb on - strand at 4126.124 kb on - strand at 4126.124 kb on - strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.171 kb on + strand at 4126.172 kb on - strand at 4126.172 kb on - strand at 4126.172 kb on - strand at 4126.172 kb on - strand at 4126.206 kb on + strand, within AO353_18765 at 4126.207 kb on - strand, within AO353_18765 at 4126.255 kb on + strand, within AO353_18765 at 4126.255 kb on + strand, within AO353_18765 at 4126.255 kb on + strand, within AO353_18765 at 4126.255 kb on + strand, within AO353_18765 at 4126.256 kb on - strand, within AO353_18765 at 4126.256 kb on - strand, within AO353_18765 at 4126.256 kb on - strand, within AO353_18765 at 4126.438 kb on + strand at 4126.439 kb on - strand at 4126.846 kb on + strand at 4126.846 kb on + strand at 4126.847 kb on - strand at 4126.847 kb on - strand at 4126.847 kb on - strand at 4127.019 kb on + strand at 4127.019 kb on + strand at 4127.192 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.196 kb on + strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.197 kb on - strand, within AO353_18770 at 4127.207 kb on + strand, within AO353_18770 at 4127.294 kb on + strand, within AO353_18770 at 4127.384 kb on + strand, within AO353_18770
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 4,125,313 + AO353_18760 0.73 +0.9 4,125,313 + AO353_18760 0.73 +0.1 4,125,313 + AO353_18760 0.73 +0.9 4,125,313 + AO353_18760 0.73 +0.9 4,125,313 + AO353_18760 0.73 -0.3 4,125,313 + AO353_18760 0.73 +0.8 4,125,313 + AO353_18760 0.73 +0.4 4,125,314 - AO353_18760 0.74 +0.3 4,125,314 - AO353_18760 0.74 +0.1 4,125,314 - AO353_18760 0.74 +0.2 4,125,399 + AO353_18760 0.81 +0.5 4,125,400 - AO353_18760 0.81 -0.5 4,125,445 + AO353_18760 0.85 -0.5 4,125,445 + AO353_18760 0.85 -0.3 4,125,446 - AO353_18760 0.85 +2.9 4,125,446 - AO353_18760 0.85 +0.2 4,125,446 - AO353_18760 0.85 +0.1 4,125,449 - AO353_18760 0.85 +0.2 4,125,449 - AO353_18760 0.85 +0.9 4,125,449 - AO353_18760 0.85 -0.1 4,125,449 - AO353_18760 0.85 -0.3 4,125,449 - AO353_18760 0.85 -0.4 4,125,487 + AO353_18760 0.89 -0.9 4,125,487 + AO353_18760 0.89 -1.0 4,125,487 + AO353_18760 0.89 +0.1 4,125,487 + AO353_18760 0.89 -1.0 4,125,514 + +0.1 4,125,514 + -0.5 4,125,515 - +0.9 4,125,515 - +1.0 4,125,520 + -0.4 4,125,570 + +1.3 4,125,622 + -1.0 4,125,622 + +0.3 4,125,622 + -0.6 4,125,622 + +0.6 4,125,622 + -0.1 4,125,622 + +0.7 4,125,623 - +0.2 4,125,623 - +1.1 4,125,623 - -0.1 4,125,693 + -0.7 4,125,693 + -0.0 4,125,693 + -0.0 4,125,693 + -0.2 4,125,693 + +0.1 4,125,693 + -0.3 4,125,694 - -0.3 4,125,694 - -0.9 4,125,694 - -1.2 4,125,694 - +1.0 4,125,694 - +1.9 4,125,694 - +0.4 4,125,694 - -0.3 4,125,695 + +0.3 4,125,695 + -1.3 4,125,695 + -1.5 4,125,695 + +1.0 4,125,695 + +0.6 4,125,695 + -0.6 4,125,696 - +0.0 4,125,696 - -1.2 4,125,797 + -0.9 4,125,797 + -0.1 4,126,123 + -0.1 4,126,123 + +1.3 4,126,123 + -2.3 4,126,123 + -0.8 4,126,123 + -0.3 4,126,123 + +1.2 4,126,123 + +0.5 4,126,123 + -1.3 4,126,124 - -0.7 4,126,124 - -2.2 4,126,124 - -0.3 4,126,124 - -0.4 4,126,124 - -0.8 4,126,124 - +0.3 4,126,124 - +0.6 4,126,124 - -0.1 4,126,171 + -0.6 4,126,171 + -0.9 4,126,171 + +0.4 4,126,171 + +0.9 4,126,171 + +0.5 4,126,171 + -0.8 4,126,171 + +0.4 4,126,171 + +1.3 4,126,171 + -0.2 4,126,172 - -2.0 4,126,172 - +1.0 4,126,172 - +0.3 4,126,172 - +1.6 4,126,206 + AO353_18765 0.15 -1.9 4,126,207 - AO353_18765 0.15 +1.1 4,126,255 + AO353_18765 0.35 -0.7 4,126,255 + AO353_18765 0.35 +0.8 4,126,255 + AO353_18765 0.35 +1.7 4,126,255 + AO353_18765 0.35 +0.3 4,126,256 - AO353_18765 0.36 -0.5 4,126,256 - AO353_18765 0.36 +1.3 4,126,256 - AO353_18765 0.36 +0.4 4,126,438 + -0.9 4,126,439 - -0.9 4,126,846 + +1.3 4,126,846 + +1.3 4,126,847 - +0.6 4,126,847 - -0.5 4,126,847 - +0.1 4,127,019 + -0.3 4,127,019 + +0.3 4,127,192 + AO353_18770 0.17 -0.2 4,127,196 + AO353_18770 0.17 -2.6 4,127,196 + AO353_18770 0.17 -0.5 4,127,196 + AO353_18770 0.17 -0.9 4,127,196 + AO353_18770 0.17 +0.9 4,127,196 + AO353_18770 0.17 +0.2 4,127,196 + AO353_18770 0.17 +0.4 4,127,196 + AO353_18770 0.17 -0.6 4,127,196 + AO353_18770 0.17 -0.8 4,127,196 + AO353_18770 0.17 -0.6 4,127,196 + AO353_18770 0.17 +1.0 4,127,196 + AO353_18770 0.17 -0.7 4,127,197 - AO353_18770 0.17 +0.3 4,127,197 - AO353_18770 0.17 -0.0 4,127,197 - AO353_18770 0.17 +0.6 4,127,197 - AO353_18770 0.17 +0.1 4,127,197 - AO353_18770 0.17 +0.0 4,127,197 - AO353_18770 0.17 -0.3 4,127,197 - AO353_18770 0.17 +0.3 4,127,197 - AO353_18770 0.17 -0.5 4,127,197 - AO353_18770 0.17 +1.0 4,127,197 - AO353_18770 0.17 +0.4 4,127,207 + AO353_18770 0.18 -1.0 4,127,294 + AO353_18770 0.22 +1.0 4,127,384 + AO353_18770 0.26 -0.1
Or see this region's nucleotide sequence