Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17750

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_17745 and AO353_17750 are separated by 119 nucleotidesAO353_17750 and AO353_17755 are separated by 176 nucleotides AO353_17745: AO353_17745 - MFS transporter, at 3,909,261 to 3,910,679 _17745 AO353_17750: AO353_17750 - transcriptional regulator, at 3,910,799 to 3,911,452 _17750 AO353_17755: AO353_17755 - ornithinee aminotransferase, at 3,911,629 to 3,912,957 _17755 Position (kb) 3910 3911 3912Strain fitness (log2 ratio) -2 -1 0 1 2at 3909.808 kb on + strand, within AO353_17745at 3909.808 kb on + strand, within AO353_17745at 3909.808 kb on + strand, within AO353_17745at 3909.809 kb on - strand, within AO353_17745at 3909.809 kb on - strand, within AO353_17745at 3909.862 kb on + strand, within AO353_17745at 3909.973 kb on - strand, within AO353_17745at 3909.973 kb on - strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.107 kb on + strand, within AO353_17745at 3910.108 kb on - strand, within AO353_17745at 3910.108 kb on - strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.125 kb on + strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.126 kb on - strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.129 kb on + strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.130 kb on - strand, within AO353_17745at 3910.301 kb on - strand, within AO353_17745at 3910.301 kb on - strand, within AO353_17745at 3910.301 kb on - strand, within AO353_17745at 3910.410 kb on + strand, within AO353_17745at 3910.426 kb on + strand, within AO353_17745at 3910.426 kb on + strand, within AO353_17745at 3910.519 kb on + strand, within AO353_17745at 3910.519 kb on + strand, within AO353_17745at 3910.519 kb on + strand, within AO353_17745at 3910.520 kb on - strand, within AO353_17745at 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.576 kb on + strandat 3910.577 kb on - strandat 3910.577 kb on - strandat 3910.580 kb on + strandat 3910.580 kb on + strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.581 kb on - strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.647 kb on + strandat 3910.648 kb on - strandat 3910.648 kb on - strandat 3910.673 kb on + strandat 3910.673 kb on + strandat 3910.673 kb on + strandat 3910.673 kb on + strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.674 kb on - strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.679 kb on + strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3910.680 kb on - strandat 3911.168 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.246 kb on + strand, within AO353_17750at 3911.247 kb on - strand, within AO353_17750at 3911.247 kb on - strand, within AO353_17750at 3911.440 kb on + strandat 3911.441 kb on - strandat 3911.441 kb on - strandat 3911.466 kb on + strandat 3911.467 kb on - strandat 3911.801 kb on + strand, within AO353_17755at 3911.914 kb on + strand, within AO353_17755at 3911.915 kb on - strand, within AO353_17755at 3911.915 kb on - strand, within AO353_17755at 3911.978 kb on - strand, within AO353_17755at 3912.080 kb on + strand, within AO353_17755at 3912.080 kb on + strand, within AO353_17755at 3912.081 kb on - strand, within AO353_17755at 3912.081 kb on - strand, within AO353_17755at 3912.155 kb on + strand, within AO353_17755at 3912.156 kb on - strand, within AO353_17755at 3912.156 kb on - strand, within AO353_17755at 3912.156 kb on - strand, within AO353_17755at 3912.156 kb on - strand, within AO353_17755at 3912.156 kb on - strand, within AO353_17755at 3912.234 kb on + strand, within AO353_17755at 3912.234 kb on - strand, within AO353_17755at 3912.338 kb on + strand, within AO353_17755at 3912.338 kb on + strand, within AO353_17755at 3912.389 kb on + strand, within AO353_17755at 3912.389 kb on + strand, within AO353_17755at 3912.390 kb on - strand, within AO353_17755

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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3,909,808 + AO353_17745 0.39 -1.5
3,909,808 + AO353_17745 0.39 -0.9
3,909,808 + AO353_17745 0.39 +0.4
3,909,809 - AO353_17745 0.39 +0.2
3,909,809 - AO353_17745 0.39 +1.1
3,909,862 + AO353_17745 0.42 +1.4
3,909,973 - AO353_17745 0.50 +1.7
3,909,973 - AO353_17745 0.50 -1.9
3,910,107 + AO353_17745 0.60 -1.0
3,910,107 + AO353_17745 0.60 -0.6
3,910,107 + AO353_17745 0.60 -1.6
3,910,107 + AO353_17745 0.60 -0.3
3,910,108 - AO353_17745 0.60 -0.6
3,910,108 - AO353_17745 0.60 -0.1
3,910,125 + AO353_17745 0.61 +0.0
3,910,125 + AO353_17745 0.61 -0.1
3,910,125 + AO353_17745 0.61 +0.8
3,910,125 + AO353_17745 0.61 -0.2
3,910,125 + AO353_17745 0.61 +1.0
3,910,125 + AO353_17745 0.61 -0.0
3,910,125 + AO353_17745 0.61 -0.7
3,910,125 + AO353_17745 0.61 -0.4
3,910,125 + AO353_17745 0.61 -0.7
3,910,125 + AO353_17745 0.61 +0.4
3,910,125 + AO353_17745 0.61 -1.1
3,910,125 + AO353_17745 0.61 +0.4
3,910,126 - AO353_17745 0.61 +0.4
3,910,126 - AO353_17745 0.61 +0.4
3,910,126 - AO353_17745 0.61 +1.0
3,910,126 - AO353_17745 0.61 -0.5
3,910,126 - AO353_17745 0.61 -0.2
3,910,126 - AO353_17745 0.61 +0.1
3,910,126 - AO353_17745 0.61 -1.2
3,910,126 - AO353_17745 0.61 +0.5
3,910,126 - AO353_17745 0.61 -0.2
3,910,126 - AO353_17745 0.61 +0.1
3,910,126 - AO353_17745 0.61 +0.7
3,910,126 - AO353_17745 0.61 +0.1
3,910,126 - AO353_17745 0.61 -0.3
3,910,126 - AO353_17745 0.61 -0.5
3,910,126 - AO353_17745 0.61 -0.5
3,910,126 - AO353_17745 0.61 -0.5
3,910,126 - AO353_17745 0.61 +0.2
3,910,129 + AO353_17745 0.61 -0.2
3,910,129 + AO353_17745 0.61 -0.4
3,910,129 + AO353_17745 0.61 -0.4
3,910,129 + AO353_17745 0.61 -1.1
3,910,129 + AO353_17745 0.61 -0.4
3,910,129 + AO353_17745 0.61 +0.4
3,910,129 + AO353_17745 0.61 -0.4
3,910,129 + AO353_17745 0.61 +1.9
3,910,129 + AO353_17745 0.61 -2.0
3,910,130 - AO353_17745 0.61 +0.2
3,910,130 - AO353_17745 0.61 -1.0
3,910,130 - AO353_17745 0.61 +0.3
3,910,130 - AO353_17745 0.61 -0.9
3,910,130 - AO353_17745 0.61 -1.4
3,910,130 - AO353_17745 0.61 -0.5
3,910,130 - AO353_17745 0.61 +1.7
3,910,130 - AO353_17745 0.61 +0.3
3,910,130 - AO353_17745 0.61 -0.4
3,910,301 - AO353_17745 0.73 -0.0
3,910,301 - AO353_17745 0.73 -1.0
3,910,301 - AO353_17745 0.73 +0.0
3,910,410 + AO353_17745 0.81 +0.9
3,910,426 + AO353_17745 0.82 -0.1
3,910,426 + AO353_17745 0.82 -0.1
3,910,519 + AO353_17745 0.89 -0.9
3,910,519 + AO353_17745 0.89 -0.2
3,910,519 + AO353_17745 0.89 -0.8
3,910,520 - AO353_17745 0.89 +0.0
3,910,576 + +1.0
3,910,576 + +0.7
3,910,576 + +0.5
3,910,576 + -1.0
3,910,576 + +0.1
3,910,576 + +0.2
3,910,576 + -0.0
3,910,577 - +0.2
3,910,577 - -1.2
3,910,580 + -0.7
3,910,580 + -0.9
3,910,581 - -1.6
3,910,581 - +1.4
3,910,581 - +0.8
3,910,581 - +2.1
3,910,581 - -0.4
3,910,581 - -0.3
3,910,647 + -0.0
3,910,647 + -0.0
3,910,647 + -0.3
3,910,647 + +0.1
3,910,647 + -0.5
3,910,648 - +0.8
3,910,648 - -0.3
3,910,673 + +0.1
3,910,673 + -0.8
3,910,673 + +0.3
3,910,673 + -2.0
3,910,674 - +0.2
3,910,674 - +1.4
3,910,674 - -0.2
3,910,674 - -0.7
3,910,674 - -0.6
3,910,679 + -1.2
3,910,679 + +1.4
3,910,679 + -0.5
3,910,679 + +0.8
3,910,679 + -0.0
3,910,679 + +0.3
3,910,679 + -0.4
3,910,679 + -1.4
3,910,679 + +0.7
3,910,679 + +1.2
3,910,679 + +0.2
3,910,679 + +1.8
3,910,679 + +0.1
3,910,679 + -1.2
3,910,679 + -0.1
3,910,679 + -2.5
3,910,679 + -0.4
3,910,679 + -0.6
3,910,679 + -1.1
3,910,679 + -0.0
3,910,679 + +0.4
3,910,679 + +0.7
3,910,680 - +2.3
3,910,680 - +0.1
3,910,680 - -0.2
3,910,680 - +2.0
3,910,680 - +0.4
3,910,680 - +0.2
3,910,680 - +0.6
3,910,680 - -0.1
3,910,680 - +0.4
3,910,680 - -0.3
3,910,680 - +0.8
3,910,680 - +0.2
3,910,680 - +0.2
3,910,680 - -0.3
3,910,680 - +0.4
3,910,680 - +0.8
3,910,680 - -0.7
3,910,680 - -0.2
3,910,680 - -2.2
3,910,680 - -0.2
3,910,680 - +1.4
3,910,680 - -0.9
3,910,680 - -2.0
3,910,680 - +0.1
3,910,680 - -0.7
3,910,680 - +0.8
3,910,680 - +0.7
3,910,680 - +1.0
3,910,680 - -0.5
3,910,680 - +0.4
3,910,680 - -0.8
3,910,680 - +1.0
3,910,680 - -1.4
3,910,680 - -1.2
3,910,680 - -0.6
3,910,680 - +0.4
3,911,168 + AO353_17750 0.56 +0.1
3,911,246 + AO353_17750 0.68 -0.0
3,911,246 + AO353_17750 0.68 -0.4
3,911,246 + AO353_17750 0.68 +1.2
3,911,246 + AO353_17750 0.68 +0.9
3,911,247 - AO353_17750 0.69 +1.1
3,911,247 - AO353_17750 0.69 +0.9
3,911,440 + +0.6
3,911,441 - -0.9
3,911,441 - +0.5
3,911,466 + +1.0
3,911,467 - -0.7
3,911,801 + AO353_17755 0.13 -0.5
3,911,914 + AO353_17755 0.21 -0.0
3,911,915 - AO353_17755 0.22 +1.4
3,911,915 - AO353_17755 0.22 +0.2
3,911,978 - AO353_17755 0.26 -1.3
3,912,080 + AO353_17755 0.34 +1.1
3,912,080 + AO353_17755 0.34 +0.4
3,912,081 - AO353_17755 0.34 +0.4
3,912,081 - AO353_17755 0.34 +0.5
3,912,155 + AO353_17755 0.40 +0.4
3,912,156 - AO353_17755 0.40 -0.1
3,912,156 - AO353_17755 0.40 +0.8
3,912,156 - AO353_17755 0.40 +0.1
3,912,156 - AO353_17755 0.40 -0.1
3,912,156 - AO353_17755 0.40 +0.5
3,912,234 + AO353_17755 0.46 +0.7
3,912,234 - AO353_17755 0.46 -0.2
3,912,338 + AO353_17755 0.53 -0.1
3,912,338 + AO353_17755 0.53 +0.1
3,912,389 + AO353_17755 0.57 -0.3
3,912,389 + AO353_17755 0.57 -1.8
3,912,390 - AO353_17755 0.57 +0.9

Or see this region's nucleotide sequence