Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16860 and AO353_16865 are separated by 67 nucleotides AO353_16865 and AO353_16870 are separated by 83 nucleotides AO353_16870 and AO353_16875 are separated by 115 nucleotides
AO353_16860: AO353_16860 - hypothetical protein, at 3,730,563 to 3,731,030
_16860
AO353_16865: AO353_16865 - RNA-binding protein, at 3,731,098 to 3,731,808
_16865
AO353_16870: AO353_16870 - acetyltransferase, at 3,731,892 to 3,732,365
_16870
AO353_16875: AO353_16875 - ribosomal protein S12 methylthiotransferase RimO, at 3,732,481 to 3,733,815
_16875
Position (kb)
3731
3732
3733 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.912 kb on + strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.913 kb on - strand, within AO353_16860 at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.996 kb on + strand at 3730.997 kb on - strand at 3731.013 kb on + strand at 3731.013 kb on + strand at 3731.013 kb on + strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.014 kb on - strand at 3731.099 kb on + strand at 3731.100 kb on - strand at 3731.100 kb on - strand at 3731.123 kb on + strand at 3731.315 kb on + strand, within AO353_16865 at 3731.315 kb on + strand, within AO353_16865 at 3731.316 kb on - strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.381 kb on + strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.382 kb on - strand, within AO353_16865 at 3731.635 kb on - strand, within AO353_16865 at 3731.843 kb on + strand at 3731.843 kb on + strand at 3731.843 kb on + strand at 3731.843 kb on + strand at 3731.843 kb on + strand at 3731.843 kb on + strand at 3731.843 kb on + strand at 3731.843 kb on + strand at 3731.844 kb on - strand at 3731.844 kb on - strand at 3731.844 kb on - strand at 3731.844 kb on - strand at 3731.844 kb on - strand at 3731.844 kb on - strand at 3731.844 kb on - strand at 3731.844 kb on - strand at 3731.894 kb on - strand at 3732.076 kb on + strand, within AO353_16870 at 3732.076 kb on + strand, within AO353_16870 at 3732.076 kb on + strand, within AO353_16870 at 3732.076 kb on + strand, within AO353_16870 at 3732.076 kb on + strand, within AO353_16870 at 3732.076 kb on + strand, within AO353_16870 at 3732.076 kb on + strand, within AO353_16870 at 3732.077 kb on - strand, within AO353_16870 at 3732.077 kb on - strand, within AO353_16870 at 3732.077 kb on - strand, within AO353_16870 at 3732.246 kb on + strand, within AO353_16870 at 3732.247 kb on - strand, within AO353_16870 at 3732.247 kb on - strand, within AO353_16870 at 3732.256 kb on + strand, within AO353_16870 at 3732.256 kb on + strand, within AO353_16870 at 3732.256 kb on + strand, within AO353_16870 at 3732.256 kb on + strand, within AO353_16870 at 3732.257 kb on - strand, within AO353_16870 at 3732.257 kb on - strand, within AO353_16870 at 3732.257 kb on - strand, within AO353_16870 at 3732.257 kb on - strand, within AO353_16870 at 3732.322 kb on + strand at 3732.322 kb on + strand at 3732.323 kb on - strand at 3732.323 kb on - strand at 3732.417 kb on + strand at 3732.417 kb on + strand at 3732.417 kb on + strand at 3732.418 kb on - strand at 3732.418 kb on - strand at 3732.418 kb on - strand at 3732.418 kb on - strand at 3732.418 kb on - strand at 3732.422 kb on + strand at 3732.423 kb on - strand at 3732.423 kb on - strand at 3732.428 kb on + strand at 3732.428 kb on + strand at 3732.429 kb on - strand at 3732.429 kb on - strand at 3732.429 kb on - strand at 3732.469 kb on + strand at 3732.482 kb on + strand at 3732.483 kb on - strand at 3732.483 kb on - strand at 3732.483 kb on - strand at 3732.506 kb on + strand at 3732.506 kb on + strand at 3732.506 kb on + strand at 3732.507 kb on - strand at 3732.507 kb on - strand at 3732.577 kb on + strand at 3732.577 kb on + strand at 3732.577 kb on + strand at 3732.577 kb on + strand at 3732.577 kb on + strand at 3732.577 kb on + strand at 3732.577 kb on + strand at 3732.577 kb on + strand at 3732.578 kb on - strand at 3732.578 kb on - strand at 3732.803 kb on + strand, within AO353_16875 at 3732.804 kb on - strand, within AO353_16875 at 3732.857 kb on + strand, within AO353_16875 at 3732.857 kb on + strand, within AO353_16875 at 3732.858 kb on - strand, within AO353_16875 at 3732.858 kb on - strand, within AO353_16875 at 3733.095 kb on - strand, within AO353_16875 at 3733.100 kb on + strand, within AO353_16875 at 3733.100 kb on + strand, within AO353_16875 at 3733.100 kb on + strand, within AO353_16875 at 3733.101 kb on - strand, within AO353_16875 at 3733.101 kb on - strand, within AO353_16875 at 3733.101 kb on - strand, within AO353_16875 at 3733.101 kb on - strand, within AO353_16875 at 3733.101 kb on - strand, within AO353_16875 at 3733.196 kb on + strand, within AO353_16875 at 3733.196 kb on + strand, within AO353_16875 at 3733.197 kb on - strand, within AO353_16875
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 3,730,912 + AO353_16860 0.75 -0.8 3,730,912 + AO353_16860 0.75 -0.0 3,730,912 + AO353_16860 0.75 +0.5 3,730,912 + AO353_16860 0.75 -0.1 3,730,912 + AO353_16860 0.75 +0.8 3,730,913 - AO353_16860 0.75 -0.4 3,730,913 - AO353_16860 0.75 +0.9 3,730,913 - AO353_16860 0.75 -0.5 3,730,913 - AO353_16860 0.75 -0.3 3,730,996 + -0.3 3,730,996 + +0.5 3,730,996 + +0.2 3,730,996 + +0.5 3,730,996 + -2.0 3,730,996 + +0.5 3,730,996 + +2.2 3,730,997 - +1.5 3,731,013 + +0.6 3,731,013 + +0.5 3,731,013 + -1.3 3,731,014 - -0.0 3,731,014 - -0.8 3,731,014 - -0.8 3,731,014 - -2.1 3,731,099 + -1.8 3,731,100 - -0.7 3,731,100 - +0.9 3,731,123 + +0.9 3,731,315 + AO353_16865 0.31 -0.5 3,731,315 + AO353_16865 0.31 -0.1 3,731,316 - AO353_16865 0.31 -0.3 3,731,381 + AO353_16865 0.40 -0.3 3,731,381 + AO353_16865 0.40 -0.3 3,731,381 + AO353_16865 0.40 +0.7 3,731,381 + AO353_16865 0.40 -0.7 3,731,381 + AO353_16865 0.40 +0.5 3,731,381 + AO353_16865 0.40 +0.3 3,731,381 + AO353_16865 0.40 +0.3 3,731,381 + AO353_16865 0.40 +0.5 3,731,381 + AO353_16865 0.40 +0.9 3,731,381 + AO353_16865 0.40 -0.0 3,731,381 + AO353_16865 0.40 -0.4 3,731,381 + AO353_16865 0.40 +0.3 3,731,381 + AO353_16865 0.40 -0.8 3,731,381 + AO353_16865 0.40 +1.0 3,731,381 + AO353_16865 0.40 +0.3 3,731,381 + AO353_16865 0.40 +0.0 3,731,381 + AO353_16865 0.40 -0.7 3,731,382 - AO353_16865 0.40 -1.6 3,731,382 - AO353_16865 0.40 -0.3 3,731,382 - AO353_16865 0.40 +0.8 3,731,382 - AO353_16865 0.40 +0.1 3,731,382 - AO353_16865 0.40 +0.9 3,731,382 - AO353_16865 0.40 -2.0 3,731,382 - AO353_16865 0.40 -0.2 3,731,382 - AO353_16865 0.40 -0.8 3,731,382 - AO353_16865 0.40 -1.1 3,731,382 - AO353_16865 0.40 -2.1 3,731,382 - AO353_16865 0.40 +0.0 3,731,635 - AO353_16865 0.76 +2.2 3,731,843 + +1.2 3,731,843 + -1.1 3,731,843 + +1.5 3,731,843 + -0.1 3,731,843 + -1.7 3,731,843 + +0.6 3,731,843 + +0.3 3,731,843 + +0.0 3,731,844 - +0.5 3,731,844 - -0.4 3,731,844 - -0.3 3,731,844 - -0.1 3,731,844 - -0.5 3,731,844 - +1.1 3,731,844 - -1.6 3,731,844 - +0.2 3,731,894 - -0.3 3,732,076 + AO353_16870 0.39 +0.2 3,732,076 + AO353_16870 0.39 +0.2 3,732,076 + AO353_16870 0.39 +1.9 3,732,076 + AO353_16870 0.39 +1.8 3,732,076 + AO353_16870 0.39 +0.3 3,732,076 + AO353_16870 0.39 +1.5 3,732,076 + AO353_16870 0.39 -0.5 3,732,077 - AO353_16870 0.39 -0.7 3,732,077 - AO353_16870 0.39 +0.1 3,732,077 - AO353_16870 0.39 +1.4 3,732,246 + AO353_16870 0.75 +1.3 3,732,247 - AO353_16870 0.75 +0.8 3,732,247 - AO353_16870 0.75 +0.6 3,732,256 + AO353_16870 0.77 +1.5 3,732,256 + AO353_16870 0.77 +0.1 3,732,256 + AO353_16870 0.77 +2.0 3,732,256 + AO353_16870 0.77 +3.5 3,732,257 - AO353_16870 0.77 -0.7 3,732,257 - AO353_16870 0.77 -1.5 3,732,257 - AO353_16870 0.77 -0.7 3,732,257 - AO353_16870 0.77 +0.3 3,732,322 + +0.3 3,732,322 + +1.2 3,732,323 - -0.6 3,732,323 - -0.6 3,732,417 + +0.8 3,732,417 + -0.6 3,732,417 + +2.1 3,732,418 - +1.9 3,732,418 - +1.5 3,732,418 - +0.5 3,732,418 - +0.8 3,732,418 - -0.2 3,732,422 + +0.9 3,732,423 - -0.5 3,732,423 - -1.3 3,732,428 + +0.0 3,732,428 + +0.5 3,732,429 - -0.9 3,732,429 - +0.2 3,732,429 - +0.9 3,732,469 + +0.2 3,732,482 + -0.3 3,732,483 - +0.7 3,732,483 - -1.3 3,732,483 - -0.3 3,732,506 + -1.1 3,732,506 + -1.7 3,732,506 + -0.3 3,732,507 - -0.5 3,732,507 - -0.1 3,732,577 + +0.4 3,732,577 + -0.5 3,732,577 + -0.8 3,732,577 + -2.2 3,732,577 + -0.8 3,732,577 + +0.7 3,732,577 + -1.6 3,732,577 + +0.0 3,732,578 - -0.3 3,732,578 - +0.6 3,732,803 + AO353_16875 0.24 +1.1 3,732,804 - AO353_16875 0.24 +0.2 3,732,857 + AO353_16875 0.28 -0.4 3,732,857 + AO353_16875 0.28 +0.2 3,732,858 - AO353_16875 0.28 -0.2 3,732,858 - AO353_16875 0.28 -0.5 3,733,095 - AO353_16875 0.46 -1.3 3,733,100 + AO353_16875 0.46 -0.2 3,733,100 + AO353_16875 0.46 -0.4 3,733,100 + AO353_16875 0.46 -0.2 3,733,101 - AO353_16875 0.46 +0.2 3,733,101 - AO353_16875 0.46 -1.0 3,733,101 - AO353_16875 0.46 -0.8 3,733,101 - AO353_16875 0.46 -0.2 3,733,101 - AO353_16875 0.46 -0.4 3,733,196 + AO353_16875 0.54 -1.3 3,733,196 + AO353_16875 0.54 -0.8 3,733,197 - AO353_16875 0.54 -2.8
Or see this region's nucleotide sequence