Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16420 and AO353_16425 are separated by 125 nucleotides AO353_16425 and AO353_16430 overlap by 4 nucleotides
AO353_16420: AO353_16420 - thiamine biosynthesis protein ThiF, at 3,646,279 to 3,647,097
_16420
AO353_16425: AO353_16425 - Fe-S metabolism protein SufE, at 3,647,223 to 3,647,627
_16425
AO353_16430: AO353_16430 - cysteine sulfinate desulfinase, at 3,647,624 to 3,648,829
_16430
Position (kb)
3647
3648 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3646.253 kb on + strand at 3646.253 kb on + strand at 3646.253 kb on + strand at 3646.253 kb on + strand at 3646.254 kb on - strand at 3646.254 kb on - strand at 3646.254 kb on - strand at 3646.254 kb on - strand at 3646.255 kb on + strand at 3646.255 kb on + strand at 3646.255 kb on + strand at 3646.255 kb on + strand at 3646.256 kb on - strand at 3646.272 kb on + strand at 3646.290 kb on + strand at 3646.290 kb on + strand at 3646.291 kb on - strand at 3646.291 kb on - strand at 3646.327 kb on + strand at 3646.327 kb on + strand at 3646.327 kb on + strand at 3646.327 kb on + strand at 3646.327 kb on + strand at 3646.328 kb on - strand at 3646.328 kb on - strand at 3646.328 kb on - strand at 3646.328 kb on - strand at 3646.328 kb on - strand at 3646.328 kb on - strand at 3646.506 kb on + strand, within AO353_16420 at 3646.506 kb on + strand, within AO353_16420 at 3646.506 kb on + strand at 3646.507 kb on - strand, within AO353_16420 at 3646.507 kb on - strand, within AO353_16420 at 3646.507 kb on - strand, within AO353_16420 at 3646.507 kb on - strand, within AO353_16420 at 3646.618 kb on + strand, within AO353_16420 at 3646.618 kb on + strand, within AO353_16420 at 3646.618 kb on + strand, within AO353_16420 at 3646.618 kb on + strand, within AO353_16420 at 3646.618 kb on + strand, within AO353_16420 at 3646.619 kb on - strand, within AO353_16420 at 3646.632 kb on + strand, within AO353_16420 at 3646.633 kb on - strand, within AO353_16420 at 3646.719 kb on + strand, within AO353_16420 at 3646.720 kb on - strand, within AO353_16420 at 3646.783 kb on - strand, within AO353_16420 at 3646.783 kb on - strand, within AO353_16420 at 3646.834 kb on + strand, within AO353_16420 at 3646.864 kb on + strand, within AO353_16420 at 3646.864 kb on + strand, within AO353_16420 at 3646.864 kb on + strand, within AO353_16420 at 3646.864 kb on + strand, within AO353_16420 at 3646.865 kb on - strand, within AO353_16420 at 3646.865 kb on - strand, within AO353_16420 at 3646.865 kb on - strand, within AO353_16420 at 3646.865 kb on - strand, within AO353_16420 at 3647.043 kb on + strand at 3647.052 kb on - strand at 3647.119 kb on + strand at 3647.120 kb on - strand at 3647.201 kb on + strand at 3647.202 kb on - strand at 3647.485 kb on - strand, within AO353_16425 at 3647.485 kb on - strand, within AO353_16425 at 3647.485 kb on - strand, within AO353_16425 at 3647.603 kb on + strand at 3647.691 kb on + strand at 3647.691 kb on + strand at 3647.691 kb on + strand at 3647.691 kb on + strand at 3647.692 kb on - strand at 3647.692 kb on - strand at 3647.692 kb on - strand at 3647.907 kb on + strand, within AO353_16430 at 3647.907 kb on + strand, within AO353_16430 at 3647.907 kb on + strand, within AO353_16430 at 3647.907 kb on + strand, within AO353_16430 at 3647.908 kb on - strand, within AO353_16430 at 3647.908 kb on - strand, within AO353_16430 at 3647.964 kb on + strand, within AO353_16430 at 3647.964 kb on + strand, within AO353_16430 at 3647.965 kb on - strand, within AO353_16430 at 3648.057 kb on + strand, within AO353_16430 at 3648.057 kb on + strand, within AO353_16430 at 3648.058 kb on - strand, within AO353_16430 at 3648.058 kb on - strand, within AO353_16430 at 3648.058 kb on - strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.129 kb on + strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.130 kb on - strand, within AO353_16430 at 3648.156 kb on + strand, within AO353_16430 at 3648.157 kb on - strand, within AO353_16430 at 3648.157 kb on - strand, within AO353_16430 at 3648.180 kb on + strand, within AO353_16430 at 3648.181 kb on - strand, within AO353_16430 at 3648.528 kb on + strand, within AO353_16430 at 3648.528 kb on + strand, within AO353_16430
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 3,646,253 + -2.3 3,646,253 + -1.0 3,646,253 + -0.5 3,646,253 + +0.1 3,646,254 - -0.2 3,646,254 - +0.1 3,646,254 - -0.1 3,646,254 - +1.4 3,646,255 + -0.7 3,646,255 + +0.4 3,646,255 + +0.0 3,646,255 + -1.4 3,646,256 - +0.2 3,646,272 + -0.2 3,646,290 + +0.7 3,646,290 + +1.5 3,646,291 - -0.1 3,646,291 - +1.2 3,646,327 + +0.5 3,646,327 + +0.9 3,646,327 + +0.9 3,646,327 + +0.5 3,646,327 + -1.3 3,646,328 - +0.2 3,646,328 - -0.3 3,646,328 - -0.1 3,646,328 - -1.1 3,646,328 - -0.6 3,646,328 - -0.2 3,646,506 + AO353_16420 0.28 +0.1 3,646,506 + AO353_16420 0.28 -0.9 3,646,506 + -0.1 3,646,507 - AO353_16420 0.28 +0.4 3,646,507 - AO353_16420 0.28 -0.6 3,646,507 - AO353_16420 0.28 +0.2 3,646,507 - AO353_16420 0.28 +0.1 3,646,618 + AO353_16420 0.41 -2.9 3,646,618 + AO353_16420 0.41 -1.6 3,646,618 + AO353_16420 0.41 -1.1 3,646,618 + AO353_16420 0.41 +1.8 3,646,618 + AO353_16420 0.41 -0.6 3,646,619 - AO353_16420 0.42 +0.3 3,646,632 + AO353_16420 0.43 +0.5 3,646,633 - AO353_16420 0.43 +0.4 3,646,719 + AO353_16420 0.54 +1.9 3,646,720 - AO353_16420 0.54 -0.1 3,646,783 - AO353_16420 0.62 +1.9 3,646,783 - AO353_16420 0.62 -0.8 3,646,834 + AO353_16420 0.68 -0.5 3,646,864 + AO353_16420 0.71 -0.7 3,646,864 + AO353_16420 0.71 +1.5 3,646,864 + AO353_16420 0.71 +0.1 3,646,864 + AO353_16420 0.71 +0.4 3,646,865 - AO353_16420 0.72 -1.4 3,646,865 - AO353_16420 0.72 +0.6 3,646,865 - AO353_16420 0.72 -0.3 3,646,865 - AO353_16420 0.72 -1.5 3,647,043 + +0.3 3,647,052 - +0.5 3,647,119 + -0.8 3,647,120 - +0.5 3,647,201 + -1.8 3,647,202 - +1.2 3,647,485 - AO353_16425 0.65 -1.1 3,647,485 - AO353_16425 0.65 -2.4 3,647,485 - AO353_16425 0.65 -0.8 3,647,603 + -1.1 3,647,691 + +0.3 3,647,691 + +0.3 3,647,691 + +0.8 3,647,691 + -1.3 3,647,692 - +1.1 3,647,692 - -0.9 3,647,692 - -0.8 3,647,907 + AO353_16430 0.23 -0.0 3,647,907 + AO353_16430 0.23 +0.3 3,647,907 + AO353_16430 0.23 +1.1 3,647,907 + AO353_16430 0.23 +0.4 3,647,908 - AO353_16430 0.24 -2.1 3,647,908 - AO353_16430 0.24 -0.2 3,647,964 + AO353_16430 0.28 -0.7 3,647,964 + AO353_16430 0.28 -0.5 3,647,965 - AO353_16430 0.28 -1.0 3,648,057 + AO353_16430 0.36 -0.6 3,648,057 + AO353_16430 0.36 -0.9 3,648,058 - AO353_16430 0.36 -0.5 3,648,058 - AO353_16430 0.36 +0.6 3,648,058 - AO353_16430 0.36 -0.5 3,648,129 + AO353_16430 0.42 +0.8 3,648,129 + AO353_16430 0.42 +0.9 3,648,129 + AO353_16430 0.42 +1.8 3,648,129 + AO353_16430 0.42 -0.1 3,648,129 + AO353_16430 0.42 +0.5 3,648,130 - AO353_16430 0.42 -0.6 3,648,130 - AO353_16430 0.42 +0.4 3,648,130 - AO353_16430 0.42 +0.5 3,648,130 - AO353_16430 0.42 -0.3 3,648,156 + AO353_16430 0.44 +1.8 3,648,157 - AO353_16430 0.44 -0.8 3,648,157 - AO353_16430 0.44 -0.6 3,648,180 + AO353_16430 0.46 -0.1 3,648,181 - AO353_16430 0.46 -0.2 3,648,528 + AO353_16430 0.75 -0.5 3,648,528 + AO353_16430 0.75 -0.2
Or see this region's nucleotide sequence