Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15905

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_15895 and AO353_15900 are separated by 40 nucleotidesAO353_15900 and AO353_15905 overlap by 8 nucleotidesAO353_15905 and AO353_15910 are separated by 139 nucleotides AO353_15895: AO353_15895 - histidinol dehydrogenase, at 3,507,013 to 3,508,302 _15895 AO353_15900: AO353_15900 - GTP-binding protein, at 3,508,343 to 3,508,984 _15900 AO353_15905: AO353_15905 - outer membrane protein assembly factor BamB, at 3,508,977 to 3,510,128 _15905 AO353_15910: AO353_15910 - ribosome-associated GTPase EngA, at 3,510,268 to 3,511,737 _15910 Position (kb) 3508 3509 3510 3511Strain fitness (log2 ratio) -2 -1 0 1 2at 3508.336 kb on + strandat 3508.336 kb on + strandat 3508.336 kb on + strandat 3508.469 kb on + strand, within AO353_15900at 3508.469 kb on + strand, within AO353_15900at 3508.469 kb on + strand, within AO353_15900at 3508.469 kb on + strand, within AO353_15900at 3508.610 kb on + strand, within AO353_15900at 3508.677 kb on + strand, within AO353_15900at 3508.944 kb on + strandat 3508.944 kb on + strandat 3508.944 kb on + strandat 3509.154 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.193 kb on + strand, within AO353_15905at 3509.497 kb on + strand, within AO353_15905at 3509.497 kb on + strand, within AO353_15905at 3509.497 kb on + strand, within AO353_15905at 3509.499 kb on + strand, within AO353_15905at 3509.499 kb on + strand, within AO353_15905at 3509.499 kb on + strand, within AO353_15905at 3509.499 kb on + strand, within AO353_15905at 3509.606 kb on + strand, within AO353_15905at 3509.721 kb on + strand, within AO353_15905at 3509.721 kb on + strand, within AO353_15905at 3509.721 kb on + strand, within AO353_15905at 3509.721 kb on + strand, within AO353_15905at 3509.721 kb on + strand, within AO353_15905at 3509.733 kb on + strand, within AO353_15905at 3509.802 kb on + strand, within AO353_15905at 3509.802 kb on + strand, within AO353_15905at 3509.802 kb on + strand, within AO353_15905at 3509.835 kb on + strand, within AO353_15905at 3509.952 kb on + strand, within AO353_15905at 3509.952 kb on + strand, within AO353_15905at 3510.081 kb on + strandat 3510.081 kb on + strandat 3510.081 kb on + strandat 3510.081 kb on + strandat 3510.081 kb on + strandat 3510.081 kb on + strandat 3510.126 kb on + strandat 3510.126 kb on + strandat 3510.126 kb on + strandat 3510.126 kb on + strandat 3510.126 kb on + strandat 3510.138 kb on + strandat 3510.150 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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3,508,336 + +0.8
3,508,336 + -0.1
3,508,336 + +0.2
3,508,469 + AO353_15900 0.20 -0.1
3,508,469 + AO353_15900 0.20 -1.6
3,508,469 + AO353_15900 0.20 -2.3
3,508,469 + AO353_15900 0.20 -1.6
3,508,610 + AO353_15900 0.42 -1.3
3,508,677 + AO353_15900 0.52 +0.5
3,508,944 + +0.2
3,508,944 + +1.2
3,508,944 + -0.6
3,509,154 + AO353_15905 0.15 -0.5
3,509,193 + AO353_15905 0.19 -1.3
3,509,193 + AO353_15905 0.19 +0.3
3,509,193 + AO353_15905 0.19 +0.5
3,509,193 + AO353_15905 0.19 -0.8
3,509,193 + AO353_15905 0.19 -0.3
3,509,193 + AO353_15905 0.19 +0.8
3,509,193 + AO353_15905 0.19 +0.3
3,509,193 + AO353_15905 0.19 -1.3
3,509,193 + AO353_15905 0.19 -1.0
3,509,193 + AO353_15905 0.19 +1.0
3,509,193 + AO353_15905 0.19 -0.4
3,509,193 + AO353_15905 0.19 -1.9
3,509,193 + AO353_15905 0.19 -2.3
3,509,193 + AO353_15905 0.19 -0.3
3,509,497 + AO353_15905 0.45 +0.5
3,509,497 + AO353_15905 0.45 -0.6
3,509,497 + AO353_15905 0.45 +1.5
3,509,499 + AO353_15905 0.45 -0.5
3,509,499 + AO353_15905 0.45 -0.8
3,509,499 + AO353_15905 0.45 -2.3
3,509,499 + AO353_15905 0.45 -0.5
3,509,606 + AO353_15905 0.55 -0.8
3,509,721 + AO353_15905 0.65 -0.1
3,509,721 + AO353_15905 0.65 -1.1
3,509,721 + AO353_15905 0.65 -0.5
3,509,721 + AO353_15905 0.65 -1.5
3,509,721 + AO353_15905 0.65 -0.5
3,509,733 + AO353_15905 0.66 -0.1
3,509,802 + AO353_15905 0.72 -2.5
3,509,802 + AO353_15905 0.72 -2.1
3,509,802 + AO353_15905 0.72 -0.3
3,509,835 + AO353_15905 0.74 -2.6
3,509,952 + AO353_15905 0.85 -0.5
3,509,952 + AO353_15905 0.85 +0.1
3,510,081 + -1.1
3,510,081 + -1.1
3,510,081 + +0.5
3,510,081 + +0.0
3,510,081 + +1.5
3,510,081 + +2.5
3,510,126 + +2.1
3,510,126 + -0.9
3,510,126 + +0.9
3,510,126 + +1.5
3,510,126 + -0.0
3,510,138 + +2.1
3,510,150 + +0.0

Or see this region's nucleotide sequence