Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_15270 and AO353_15275 overlap by 4 nucleotides AO353_15275 and AO353_15280 are separated by 134 nucleotides AO353_15280 and AO353_15285 are separated by 11 nucleotides
AO353_15270: AO353_15270 - phospholipid-binding protein, at 3,373,838 to 3,374,416
_15270
AO353_15275: AO353_15275 - phosphoheptose isomerase, at 3,374,413 to 3,375,006
_15275
AO353_15280: AO353_15280 - hypothetical protein, at 3,375,141 to 3,375,458
_15280
AO353_15285: AO353_15285 - hypothetical protein, at 3,375,470 to 3,377,281
_15285
Position (kb)
3375
3376 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3374.219 kb on - strand, within AO353_15270 at 3374.378 kb on + strand at 3374.378 kb on + strand at 3374.379 kb on - strand at 3374.379 kb on - strand at 3374.379 kb on - strand at 3374.379 kb on - strand at 3374.379 kb on - strand at 3374.813 kb on - strand, within AO353_15275 at 3374.874 kb on + strand, within AO353_15275 at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.019 kb on - strand at 3375.023 kb on - strand at 3375.023 kb on - strand at 3375.023 kb on - strand at 3375.023 kb on - strand at 3375.023 kb on - strand at 3375.160 kb on - strand at 3375.160 kb on - strand at 3375.221 kb on - strand, within AO353_15280 at 3375.221 kb on - strand, within AO353_15280 at 3375.319 kb on - strand, within AO353_15280 at 3375.319 kb on - strand, within AO353_15280 at 3375.319 kb on - strand, within AO353_15280 at 3375.319 kb on - strand, within AO353_15280 at 3375.319 kb on - strand, within AO353_15280 at 3375.321 kb on + strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.322 kb on - strand, within AO353_15280 at 3375.327 kb on - strand, within AO353_15280 at 3375.365 kb on + strand, within AO353_15280 at 3375.366 kb on - strand, within AO353_15280 at 3375.481 kb on + strand at 3375.482 kb on - strand at 3375.482 kb on - strand at 3375.657 kb on + strand, within AO353_15285 at 3375.778 kb on - strand, within AO353_15285 at 3375.778 kb on - strand, within AO353_15285 at 3375.806 kb on + strand, within AO353_15285 at 3375.806 kb on + strand, within AO353_15285 at 3375.806 kb on + strand, within AO353_15285 at 3375.806 kb on + strand, within AO353_15285 at 3375.807 kb on - strand, within AO353_15285 at 3375.807 kb on - strand, within AO353_15285 at 3375.807 kb on - strand, within AO353_15285 at 3375.807 kb on - strand, within AO353_15285 at 3375.807 kb on - strand, within AO353_15285 at 3375.822 kb on + strand, within AO353_15285 at 3375.823 kb on - strand, within AO353_15285 at 3375.953 kb on + strand, within AO353_15285 at 3375.953 kb on + strand, within AO353_15285 at 3375.954 kb on - strand, within AO353_15285 at 3376.254 kb on + strand, within AO353_15285 at 3376.254 kb on + strand, within AO353_15285 at 3376.254 kb on + strand, within AO353_15285 at 3376.254 kb on + strand, within AO353_15285 at 3376.255 kb on - strand, within AO353_15285 at 3376.369 kb on - strand, within AO353_15285 at 3376.404 kb on + strand, within AO353_15285 at 3376.404 kb on + strand, within AO353_15285 at 3376.404 kb on + strand, within AO353_15285 at 3376.404 kb on + strand, within AO353_15285 at 3376.404 kb on + strand, within AO353_15285 at 3376.405 kb on - strand, within AO353_15285 at 3376.405 kb on - strand, within AO353_15285 at 3376.405 kb on - strand, within AO353_15285 at 3376.405 kb on - strand, within AO353_15285 at 3376.405 kb on - strand, within AO353_15285 at 3376.449 kb on + strand, within AO353_15285 at 3376.449 kb on + strand, within AO353_15285 at 3376.450 kb on - strand, within AO353_15285
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 3,374,219 - AO353_15270 0.66 +1.1 3,374,378 + +0.8 3,374,378 + -0.4 3,374,379 - +0.3 3,374,379 - +1.6 3,374,379 - -2.0 3,374,379 - -0.4 3,374,379 - -0.8 3,374,813 - AO353_15275 0.67 +0.4 3,374,874 + AO353_15275 0.78 +0.8 3,375,019 - +0.6 3,375,019 - +0.3 3,375,019 - +1.3 3,375,019 - -0.0 3,375,019 - +0.4 3,375,019 - -0.4 3,375,019 - +1.6 3,375,019 - +0.0 3,375,019 - +0.4 3,375,019 - -0.5 3,375,019 - -1.2 3,375,019 - +0.2 3,375,019 - +0.8 3,375,023 - +0.6 3,375,023 - +0.6 3,375,023 - +0.2 3,375,023 - +0.4 3,375,023 - -0.7 3,375,160 - -0.0 3,375,160 - +0.3 3,375,221 - AO353_15280 0.25 -0.0 3,375,221 - AO353_15280 0.25 +0.0 3,375,319 - AO353_15280 0.56 -1.0 3,375,319 - AO353_15280 0.56 +0.8 3,375,319 - AO353_15280 0.56 +1.2 3,375,319 - AO353_15280 0.56 -0.3 3,375,319 - AO353_15280 0.56 -0.4 3,375,321 + AO353_15280 0.57 +1.2 3,375,322 - AO353_15280 0.57 +1.6 3,375,322 - AO353_15280 0.57 -0.0 3,375,322 - AO353_15280 0.57 +0.3 3,375,322 - AO353_15280 0.57 +1.4 3,375,322 - AO353_15280 0.57 -1.0 3,375,322 - AO353_15280 0.57 -0.5 3,375,322 - AO353_15280 0.57 +0.6 3,375,322 - AO353_15280 0.57 +2.1 3,375,322 - AO353_15280 0.57 +1.2 3,375,327 - AO353_15280 0.58 +0.2 3,375,365 + AO353_15280 0.70 +0.9 3,375,366 - AO353_15280 0.71 +1.6 3,375,481 + -0.0 3,375,482 - -0.1 3,375,482 - -0.2 3,375,657 + AO353_15285 0.10 -2.4 3,375,778 - AO353_15285 0.17 +0.2 3,375,778 - AO353_15285 0.17 +0.8 3,375,806 + AO353_15285 0.19 -0.1 3,375,806 + AO353_15285 0.19 +0.2 3,375,806 + AO353_15285 0.19 -2.8 3,375,806 + AO353_15285 0.19 +0.4 3,375,807 - AO353_15285 0.19 +0.8 3,375,807 - AO353_15285 0.19 +0.8 3,375,807 - AO353_15285 0.19 -0.2 3,375,807 - AO353_15285 0.19 -0.7 3,375,807 - AO353_15285 0.19 -0.2 3,375,822 + AO353_15285 0.19 +0.1 3,375,823 - AO353_15285 0.19 -0.0 3,375,953 + AO353_15285 0.27 -1.8 3,375,953 + AO353_15285 0.27 -0.0 3,375,954 - AO353_15285 0.27 +3.6 3,376,254 + AO353_15285 0.43 -0.1 3,376,254 + AO353_15285 0.43 +0.4 3,376,254 + AO353_15285 0.43 -0.7 3,376,254 + AO353_15285 0.43 -0.4 3,376,255 - AO353_15285 0.43 -1.2 3,376,369 - AO353_15285 0.50 +1.9 3,376,404 + AO353_15285 0.52 -0.4 3,376,404 + AO353_15285 0.52 +0.2 3,376,404 + AO353_15285 0.52 -0.4 3,376,404 + AO353_15285 0.52 -0.0 3,376,404 + AO353_15285 0.52 -0.3 3,376,405 - AO353_15285 0.52 -0.2 3,376,405 - AO353_15285 0.52 +0.8 3,376,405 - AO353_15285 0.52 +0.2 3,376,405 - AO353_15285 0.52 +0.1 3,376,405 - AO353_15285 0.52 +0.7 3,376,449 + AO353_15285 0.54 +0.4 3,376,449 + AO353_15285 0.54 -0.5 3,376,450 - AO353_15285 0.54 -0.8
Or see this region's nucleotide sequence