Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14910 and AO353_14915 overlap by 4 nucleotides AO353_14915 and AO353_14920 overlap by 4 nucleotides
AO353_14910: AO353_14910 - pyridine nucleotide-disulfide oxidoreductase, at 3,298,150 to 3,299,418
_14910
AO353_14915: AO353_14915 - (2Fe-2S)-binding protein, at 3,299,415 to 3,299,651
_14915
AO353_14920: AO353_14920 - D-amino acid oxidase, at 3,299,648 to 3,300,763
_14920
Position (kb)
3299
3300 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3298.595 kb on + strand, within AO353_14910 at 3298.595 kb on + strand, within AO353_14910 at 3298.595 kb on + strand, within AO353_14910 at 3298.595 kb on + strand, within AO353_14910 at 3298.595 kb on + strand, within AO353_14910 at 3298.596 kb on - strand, within AO353_14910 at 3298.596 kb on - strand, within AO353_14910 at 3298.596 kb on - strand, within AO353_14910 at 3298.611 kb on + strand, within AO353_14910 at 3298.651 kb on + strand, within AO353_14910 at 3298.651 kb on + strand, within AO353_14910 at 3298.652 kb on - strand, within AO353_14910 at 3298.652 kb on - strand, within AO353_14910 at 3298.652 kb on - strand, within AO353_14910 at 3298.784 kb on + strand, within AO353_14910 at 3298.785 kb on - strand, within AO353_14910 at 3299.129 kb on + strand, within AO353_14910 at 3299.129 kb on + strand, within AO353_14910 at 3299.130 kb on - strand, within AO353_14910 at 3299.223 kb on + strand, within AO353_14910 at 3299.581 kb on + strand, within AO353_14915 at 3299.581 kb on + strand, within AO353_14915 at 3299.582 kb on - strand, within AO353_14915 at 3299.582 kb on - strand, within AO353_14915 at 3299.582 kb on - strand, within AO353_14915 at 3299.582 kb on - strand, within AO353_14915 at 3299.695 kb on - strand at 3299.695 kb on - strand at 3299.725 kb on + strand at 3299.725 kb on + strand at 3299.725 kb on + strand at 3299.725 kb on + strand at 3299.725 kb on + strand at 3299.726 kb on - strand at 3299.726 kb on - strand at 3299.726 kb on - strand at 3299.913 kb on + strand, within AO353_14920 at 3299.913 kb on + strand, within AO353_14920 at 3299.913 kb on + strand, within AO353_14920 at 3299.913 kb on + strand, within AO353_14920 at 3299.914 kb on - strand, within AO353_14920 at 3300.075 kb on + strand, within AO353_14920 at 3300.075 kb on + strand, within AO353_14920 at 3300.075 kb on + strand, within AO353_14920 at 3300.075 kb on + strand, within AO353_14920 at 3300.076 kb on - strand, within AO353_14920 at 3300.076 kb on - strand, within AO353_14920 at 3300.076 kb on - strand, within AO353_14920 at 3300.336 kb on + strand, within AO353_14920 at 3300.336 kb on + strand, within AO353_14920 at 3300.337 kb on - strand, within AO353_14920 at 3300.337 kb on - strand, within AO353_14920 at 3300.405 kb on + strand, within AO353_14920 at 3300.406 kb on - strand, within AO353_14920 at 3300.406 kb on - strand, within AO353_14920 at 3300.406 kb on - strand, within AO353_14920 at 3300.406 kb on - strand, within AO353_14920 at 3300.406 kb on - strand, within AO353_14920 at 3300.582 kb on + strand, within AO353_14920 at 3300.583 kb on - strand, within AO353_14920 at 3300.583 kb on - strand, within AO353_14920 at 3300.583 kb on - strand, within AO353_14920
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 3,298,595 + AO353_14910 0.35 +1.7 3,298,595 + AO353_14910 0.35 -0.3 3,298,595 + AO353_14910 0.35 -0.6 3,298,595 + AO353_14910 0.35 -0.6 3,298,595 + AO353_14910 0.35 +1.6 3,298,596 - AO353_14910 0.35 -0.7 3,298,596 - AO353_14910 0.35 +1.0 3,298,596 - AO353_14910 0.35 -0.6 3,298,611 + AO353_14910 0.36 -0.2 3,298,651 + AO353_14910 0.39 +0.4 3,298,651 + AO353_14910 0.39 +0.3 3,298,652 - AO353_14910 0.40 -0.4 3,298,652 - AO353_14910 0.40 -0.3 3,298,652 - AO353_14910 0.40 -1.5 3,298,784 + AO353_14910 0.50 +0.3 3,298,785 - AO353_14910 0.50 -1.0 3,299,129 + AO353_14910 0.77 +0.6 3,299,129 + AO353_14910 0.77 -0.6 3,299,130 - AO353_14910 0.77 +0.0 3,299,223 + AO353_14910 0.85 -1.2 3,299,581 + AO353_14915 0.70 -0.5 3,299,581 + AO353_14915 0.70 +0.0 3,299,582 - AO353_14915 0.70 -1.0 3,299,582 - AO353_14915 0.70 +0.4 3,299,582 - AO353_14915 0.70 +0.8 3,299,582 - AO353_14915 0.70 +1.9 3,299,695 - +0.1 3,299,695 - -1.4 3,299,725 + -0.4 3,299,725 + -0.6 3,299,725 + +0.9 3,299,725 + -0.4 3,299,725 + -0.1 3,299,726 - +0.3 3,299,726 - +0.6 3,299,726 - -0.4 3,299,913 + AO353_14920 0.24 +1.2 3,299,913 + AO353_14920 0.24 -1.2 3,299,913 + AO353_14920 0.24 -0.3 3,299,913 + AO353_14920 0.24 -1.0 3,299,914 - AO353_14920 0.24 +0.5 3,300,075 + AO353_14920 0.38 +0.2 3,300,075 + AO353_14920 0.38 -0.6 3,300,075 + AO353_14920 0.38 -0.2 3,300,075 + AO353_14920 0.38 -0.4 3,300,076 - AO353_14920 0.38 -1.0 3,300,076 - AO353_14920 0.38 +0.3 3,300,076 - AO353_14920 0.38 +0.6 3,300,336 + AO353_14920 0.62 +0.7 3,300,336 + AO353_14920 0.62 -0.6 3,300,337 - AO353_14920 0.62 +0.0 3,300,337 - AO353_14920 0.62 -0.8 3,300,405 + AO353_14920 0.68 +0.3 3,300,406 - AO353_14920 0.68 -1.0 3,300,406 - AO353_14920 0.68 +0.1 3,300,406 - AO353_14920 0.68 +0.6 3,300,406 - AO353_14920 0.68 +0.0 3,300,406 - AO353_14920 0.68 -0.7 3,300,582 + AO353_14920 0.84 +1.6 3,300,583 - AO353_14920 0.84 +1.3 3,300,583 - AO353_14920 0.84 +0.3 3,300,583 - AO353_14920 0.84 -2.9
Or see this region's nucleotide sequence