Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14385 and AO353_14390 are separated by 324 nucleotides AO353_14390 and AO353_14395 are separated by 4 nucleotides AO353_14395 and AO353_14400 are separated by 712 nucleotides
AO353_14385: AO353_14385 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 3,189,571 to 3,190,371
_14385
AO353_14390: AO353_14390 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase, at 3,190,696 to 3,191,178
_14390
AO353_14395: AO353_14395 - poly(A) polymerase, at 3,191,183 to 3,192,586
_14395
AO353_14400: AO353_14400 - Fis family transcriptional regulator, at 3,193,299 to 3,194,732
_14400
Position (kb)
3191
3192
3193 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3190.291 kb on - strand, within AO353_14385 at 3190.298 kb on + strand at 3190.298 kb on + strand at 3190.298 kb on + strand at 3190.298 kb on + strand at 3190.298 kb on + strand at 3190.299 kb on - strand at 3190.299 kb on - strand at 3190.362 kb on + strand at 3190.363 kb on - strand at 3190.363 kb on - strand at 3190.363 kb on - strand at 3190.363 kb on - strand at 3190.373 kb on + strand at 3190.373 kb on + strand at 3190.373 kb on + strand at 3190.373 kb on + strand at 3190.373 kb on + strand at 3190.373 kb on + strand at 3190.373 kb on + strand at 3190.373 kb on + strand at 3190.374 kb on - strand at 3190.374 kb on - strand at 3190.374 kb on - strand at 3190.374 kb on - strand at 3190.374 kb on - strand at 3190.374 kb on - strand at 3190.374 kb on - strand at 3190.374 kb on - strand at 3190.404 kb on + strand at 3190.405 kb on - strand at 3190.434 kb on + strand at 3190.434 kb on + strand at 3190.435 kb on - strand at 3190.435 kb on - strand at 3190.464 kb on + strand at 3190.464 kb on + strand at 3190.464 kb on + strand at 3190.464 kb on + strand at 3190.465 kb on - strand at 3190.465 kb on - strand at 3190.465 kb on - strand at 3190.465 kb on - strand at 3190.486 kb on + strand at 3190.486 kb on + strand at 3190.486 kb on + strand at 3190.486 kb on + strand at 3190.487 kb on - strand at 3190.487 kb on - strand at 3190.487 kb on - strand at 3190.515 kb on + strand at 3190.515 kb on + strand at 3190.515 kb on + strand at 3190.515 kb on + strand at 3190.515 kb on + strand at 3190.516 kb on - strand at 3190.516 kb on - strand at 3190.516 kb on - strand at 3190.516 kb on - strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.517 kb on + strand at 3190.518 kb on - strand at 3190.518 kb on - strand at 3190.518 kb on - strand at 3190.518 kb on - strand at 3190.518 kb on - strand at 3190.566 kb on + strand at 3190.566 kb on + strand at 3190.567 kb on - strand at 3190.590 kb on - strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.607 kb on + strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.608 kb on - strand at 3190.615 kb on + strand at 3190.615 kb on + strand at 3190.616 kb on - strand at 3190.697 kb on + strand at 3190.698 kb on - strand at 3190.698 kb on - strand at 3190.698 kb on - strand at 3191.166 kb on - strand at 3191.166 kb on - strand at 3191.166 kb on - strand at 3191.166 kb on - strand at 3191.166 kb on - strand at 3191.166 kb on - strand at 3191.166 kb on - strand at 3191.166 kb on - strand at 3191.185 kb on - strand at 3191.204 kb on + strand at 3191.252 kb on - strand at 3191.252 kb on - strand at 3191.335 kb on - strand, within AO353_14395 at 3191.390 kb on + strand, within AO353_14395 at 3191.733 kb on + strand, within AO353_14395 at 3191.733 kb on + strand, within AO353_14395 at 3191.733 kb on + strand, within AO353_14395 at 3191.734 kb on - strand, within AO353_14395 at 3191.734 kb on - strand, within AO353_14395 at 3191.734 kb on - strand, within AO353_14395 at 3191.734 kb on - strand, within AO353_14395 at 3192.047 kb on + strand, within AO353_14395 at 3192.048 kb on - strand, within AO353_14395 at 3192.048 kb on - strand, within AO353_14395 at 3192.091 kb on - strand, within AO353_14395 at 3192.091 kb on - strand, within AO353_14395 at 3192.091 kb on - strand, within AO353_14395 at 3192.314 kb on - strand, within AO353_14395 at 3192.314 kb on - strand, within AO353_14395 at 3192.314 kb on - strand, within AO353_14395 at 3192.542 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.659 kb on + strand at 3192.660 kb on - strand at 3192.660 kb on - strand at 3192.660 kb on - strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.676 kb on - strand at 3192.676 kb on - strand at 3192.676 kb on - strand at 3192.699 kb on - strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.778 kb on + strand at 3192.779 kb on - strand at 3192.779 kb on - strand at 3192.785 kb on - strand at 3192.785 kb on - strand at 3192.937 kb on - strand at 3192.984 kb on + strand at 3192.984 kb on + strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3193.010 kb on + strand at 3193.010 kb on + strand at 3193.011 kb on - strand at 3193.011 kb on - strand at 3193.011 kb on - strand at 3193.014 kb on + strand at 3193.015 kb on - strand at 3193.061 kb on + strand at 3193.062 kb on - strand at 3193.062 kb on - strand at 3193.067 kb on + strand at 3193.067 kb on + strand at 3193.068 kb on - strand at 3193.068 kb on - strand at 3193.068 kb on - strand at 3193.068 kb on - strand at 3193.089 kb on + strand at 3193.089 kb on + strand at 3193.090 kb on - strand at 3193.101 kb on - strand at 3193.101 kb on - strand at 3193.109 kb on + strand at 3193.109 kb on + strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.111 kb on + strand at 3193.111 kb on + strand at 3193.146 kb on - strand at 3193.159 kb on - strand at 3193.159 kb on - strand at 3193.212 kb on + strand at 3193.213 kb on - strand at 3193.229 kb on + strand at 3193.274 kb on + strand at 3193.275 kb on - strand at 3193.447 kb on + strand at 3193.448 kb on - strand, within AO353_14400 at 3193.448 kb on - strand, within AO353_14400
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 3,190,291 - AO353_14385 0.90 -1.2 3,190,298 + -0.4 3,190,298 + +0.3 3,190,298 + -0.4 3,190,298 + +2.1 3,190,298 + +0.2 3,190,299 - +0.4 3,190,299 - -2.9 3,190,362 + +0.3 3,190,363 - +0.7 3,190,363 - -0.0 3,190,363 - -1.5 3,190,363 - +0.1 3,190,373 + -0.4 3,190,373 + -0.5 3,190,373 + -0.2 3,190,373 + +2.4 3,190,373 + -1.0 3,190,373 + -1.2 3,190,373 + +0.4 3,190,373 + +0.1 3,190,374 - -0.7 3,190,374 - +0.8 3,190,374 - -1.1 3,190,374 - +0.1 3,190,374 - +0.2 3,190,374 - +0.1 3,190,374 - +0.1 3,190,374 - +0.2 3,190,404 + -0.0 3,190,405 - -0.4 3,190,434 + -0.9 3,190,434 + +0.7 3,190,435 - -0.0 3,190,435 - +0.4 3,190,464 + -0.0 3,190,464 + -0.5 3,190,464 + +0.5 3,190,464 + +0.3 3,190,465 - +0.6 3,190,465 - +0.1 3,190,465 - -0.1 3,190,465 - -0.1 3,190,486 + +0.6 3,190,486 + -0.4 3,190,486 + +1.6 3,190,486 + +1.2 3,190,487 - -0.1 3,190,487 - -0.4 3,190,487 - -0.3 3,190,515 + -0.9 3,190,515 + +0.2 3,190,515 + -0.2 3,190,515 + +0.1 3,190,515 + +3.2 3,190,516 - +0.6 3,190,516 - +0.1 3,190,516 - +0.2 3,190,516 - +0.1 3,190,517 + +0.2 3,190,517 + -1.2 3,190,517 + +0.1 3,190,517 + +0.5 3,190,517 + +0.4 3,190,517 + +0.8 3,190,517 + -1.3 3,190,517 + -0.7 3,190,517 + -1.4 3,190,518 - -0.7 3,190,518 - +0.2 3,190,518 - -0.6 3,190,518 - +0.1 3,190,518 - -0.5 3,190,566 + +1.0 3,190,566 + +1.1 3,190,567 - +0.6 3,190,590 - +0.9 3,190,607 + +0.4 3,190,607 + -0.9 3,190,607 + +0.2 3,190,607 + -1.0 3,190,607 + +0.5 3,190,607 + -0.0 3,190,607 + -1.1 3,190,607 + +0.4 3,190,607 + -0.6 3,190,607 + +0.3 3,190,607 + +0.3 3,190,608 - -0.2 3,190,608 - -0.7 3,190,608 - +0.4 3,190,608 - +1.2 3,190,608 - -0.3 3,190,608 - -0.6 3,190,608 - +1.4 3,190,608 - +0.5 3,190,608 - +0.4 3,190,608 - +2.1 3,190,615 + +1.6 3,190,615 + +0.3 3,190,616 - -0.4 3,190,697 + +0.6 3,190,698 - -0.7 3,190,698 - -0.5 3,190,698 - -0.4 3,191,166 - -1.1 3,191,166 - +1.6 3,191,166 - +0.0 3,191,166 - -0.9 3,191,166 - +0.7 3,191,166 - -0.7 3,191,166 - -1.5 3,191,166 - +0.0 3,191,185 - +0.5 3,191,204 + -0.4 3,191,252 - +0.4 3,191,252 - +0.6 3,191,335 - AO353_14395 0.11 +0.1 3,191,390 + AO353_14395 0.15 -1.2 3,191,733 + AO353_14395 0.39 +1.6 3,191,733 + AO353_14395 0.39 -0.7 3,191,733 + AO353_14395 0.39 -1.0 3,191,734 - AO353_14395 0.39 +0.0 3,191,734 - AO353_14395 0.39 +1.8 3,191,734 - AO353_14395 0.39 -0.7 3,191,734 - AO353_14395 0.39 -1.8 3,192,047 + AO353_14395 0.62 -0.4 3,192,048 - AO353_14395 0.62 -1.5 3,192,048 - AO353_14395 0.62 +0.0 3,192,091 - AO353_14395 0.65 -2.2 3,192,091 - AO353_14395 0.65 +0.0 3,192,091 - AO353_14395 0.65 -1.5 3,192,314 - AO353_14395 0.81 -1.7 3,192,314 - AO353_14395 0.81 -1.2 3,192,314 - AO353_14395 0.81 -1.0 3,192,542 - -1.0 3,192,653 - -1.3 3,192,653 - -1.0 3,192,653 - -0.5 3,192,653 - +1.2 3,192,653 - -0.8 3,192,653 - +0.3 3,192,653 - -0.7 3,192,659 + +0.4 3,192,660 - +1.9 3,192,660 - +0.6 3,192,660 - +0.6 3,192,675 + +0.4 3,192,675 + +0.6 3,192,675 + +0.6 3,192,675 + -0.2 3,192,675 + -0.3 3,192,675 + +3.6 3,192,676 - -1.0 3,192,676 - -0.4 3,192,676 - +2.2 3,192,699 - +0.0 3,192,736 + +1.0 3,192,736 + -0.9 3,192,736 + -0.6 3,192,736 + -1.3 3,192,736 + +1.0 3,192,737 - +1.4 3,192,737 - -0.5 3,192,737 - -0.4 3,192,737 - +0.6 3,192,737 - +0.4 3,192,737 - -0.8 3,192,765 + -1.0 3,192,765 + +0.6 3,192,765 + -1.0 3,192,765 + -0.2 3,192,765 + -0.0 3,192,766 - +0.9 3,192,766 - +0.7 3,192,766 - +1.2 3,192,766 - +0.6 3,192,766 - -1.1 3,192,766 - +2.0 3,192,766 - -1.2 3,192,766 - -0.8 3,192,766 - -1.9 3,192,766 - +0.2 3,192,778 + +0.2 3,192,779 - -0.7 3,192,779 - +0.0 3,192,785 - +0.6 3,192,785 - +1.8 3,192,937 - +0.9 3,192,984 + +0.3 3,192,984 + -1.2 3,192,985 - +1.3 3,192,985 - -1.5 3,192,985 - +1.0 3,192,985 - -0.8 3,192,985 - -0.3 3,192,985 - +1.3 3,193,010 + +2.0 3,193,010 + -0.2 3,193,011 - -1.2 3,193,011 - +1.1 3,193,011 - -0.5 3,193,014 + +0.7 3,193,015 - -0.5 3,193,061 + +1.8 3,193,062 - -1.7 3,193,062 - +1.3 3,193,067 + +0.3 3,193,067 + +1.1 3,193,068 - -0.7 3,193,068 - -1.4 3,193,068 - -0.2 3,193,068 - -0.2 3,193,089 + +0.5 3,193,089 + +2.4 3,193,090 - -0.7 3,193,101 - +0.6 3,193,101 - +0.1 3,193,109 + +1.6 3,193,109 + +1.3 3,193,110 - -1.5 3,193,110 - -1.0 3,193,110 - -0.8 3,193,110 - -0.6 3,193,110 - -0.8 3,193,110 - -0.5 3,193,111 + +0.0 3,193,111 + -0.4 3,193,146 - -0.9 3,193,159 - -0.8 3,193,159 - +0.4 3,193,212 + +0.5 3,193,213 - +0.8 3,193,229 + -0.5 3,193,274 + +1.6 3,193,275 - +0.1 3,193,447 + +0.6 3,193,448 - AO353_14400 0.10 -2.1 3,193,448 - AO353_14400 0.10 -2.3
Or see this region's nucleotide sequence