Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12930 and AO353_12935 are separated by 84 nucleotides AO353_12935 and AO353_12940 are separated by 81 nucleotides
AO353_12930: AO353_12930 - GlcNAc-PI de-N-acetylase, at 2,862,553 to 2,863,968
_12930
AO353_12935: AO353_12935 - glycosyltransferase, at 2,864,053 to 2,865,009
_12935
AO353_12940: AO353_12940 - glycosyl transferase, at 2,865,091 to 2,866,194
_12940
Position (kb)
2864
2865
2866 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2863.351 kb on + strand, within AO353_12930 at 2863.351 kb on + strand, within AO353_12930 at 2863.648 kb on - strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.772 kb on + strand, within AO353_12930 at 2863.966 kb on + strand at 2863.966 kb on + strand at 2863.966 kb on + strand at 2863.966 kb on + strand at 2864.063 kb on + strand at 2864.063 kb on + strand at 2864.063 kb on + strand at 2864.220 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.335 kb on + strand, within AO353_12935 at 2864.335 kb on + strand, within AO353_12935 at 2864.335 kb on + strand, within AO353_12935 at 2864.359 kb on + strand, within AO353_12935 at 2864.523 kb on + strand, within AO353_12935 at 2864.539 kb on + strand, within AO353_12935 at 2864.775 kb on + strand, within AO353_12935 at 2864.913 kb on + strand, within AO353_12935 at 2864.913 kb on + strand, within AO353_12935 at 2864.913 kb on + strand, within AO353_12935 at 2864.925 kb on + strand at 2864.925 kb on + strand at 2864.925 kb on + strand at 2865.043 kb on + strand at 2865.043 kb on + strand at 2865.043 kb on + strand at 2865.043 kb on + strand at 2865.044 kb on - strand at 2865.045 kb on + strand at 2865.045 kb on + strand at 2865.045 kb on + strand at 2865.045 kb on + strand at 2865.046 kb on - strand at 2865.046 kb on - strand at 2865.046 kb on - strand at 2865.046 kb on - strand at 2865.046 kb on - strand at 2865.049 kb on + strand at 2865.049 kb on + strand at 2865.049 kb on + strand at 2865.049 kb on + strand at 2865.049 kb on + strand at 2865.049 kb on + strand at 2865.050 kb on - strand at 2865.050 kb on - strand at 2865.050 kb on - strand at 2865.096 kb on + strand at 2865.096 kb on + strand at 2865.097 kb on - strand at 2865.103 kb on - strand at 2865.130 kb on + strand at 2865.131 kb on - strand at 2865.161 kb on + strand at 2865.161 kb on + strand at 2865.161 kb on + strand at 2865.161 kb on + strand at 2865.161 kb on + strand at 2865.162 kb on - strand at 2865.162 kb on - strand at 2865.162 kb on - strand at 2865.162 kb on - strand at 2865.162 kb on - strand at 2865.162 kb on - strand at 2865.162 kb on - strand at 2865.173 kb on + strand at 2865.173 kb on + strand at 2865.173 kb on + strand at 2865.173 kb on + strand at 2865.174 kb on - strand at 2865.174 kb on - strand at 2865.195 kb on + strand at 2865.195 kb on + strand at 2865.196 kb on - strand at 2865.196 kb on - strand at 2865.196 kb on - strand at 2865.196 kb on - strand at 2865.196 kb on - strand at 2865.331 kb on + strand, within AO353_12940 at 2865.362 kb on + strand, within AO353_12940 at 2865.362 kb on + strand, within AO353_12940 at 2865.363 kb on - strand, within AO353_12940 at 2865.363 kb on - strand, within AO353_12940 at 2865.363 kb on - strand, within AO353_12940 at 2865.440 kb on + strand, within AO353_12940 at 2865.563 kb on + strand, within AO353_12940 at 2865.563 kb on + strand, within AO353_12940 at 2865.563 kb on + strand, within AO353_12940 at 2865.563 kb on + strand, within AO353_12940 at 2865.564 kb on - strand, within AO353_12940 at 2865.692 kb on + strand, within AO353_12940 at 2865.693 kb on - strand, within AO353_12940 at 2865.854 kb on + strand, within AO353_12940 at 2865.854 kb on + strand, within AO353_12940 at 2865.854 kb on + strand, within AO353_12940 at 2865.854 kb on + strand, within AO353_12940 at 2865.855 kb on - strand, within AO353_12940 at 2865.855 kb on - strand, within AO353_12940 at 2865.855 kb on - strand, within AO353_12940 at 2865.855 kb on - strand, within AO353_12940 at 2865.855 kb on - strand, within AO353_12940 at 2865.855 kb on - strand, within AO353_12940 at 2865.857 kb on + strand, within AO353_12940 at 2865.857 kb on + strand, within AO353_12940 at 2865.858 kb on - strand, within AO353_12940
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 2,863,351 + AO353_12930 0.56 -1.3 2,863,351 + AO353_12930 0.56 -1.0 2,863,648 - AO353_12930 0.77 -0.7 2,863,754 + AO353_12930 0.85 -0.7 2,863,754 + AO353_12930 0.85 -1.8 2,863,754 + AO353_12930 0.85 +2.3 2,863,754 + AO353_12930 0.85 -1.2 2,863,754 + AO353_12930 0.85 -0.6 2,863,754 + AO353_12930 0.85 -2.1 2,863,772 + AO353_12930 0.86 +0.0 2,863,966 + -0.8 2,863,966 + +0.2 2,863,966 + +0.9 2,863,966 + -0.4 2,864,063 + +1.0 2,864,063 + -0.1 2,864,063 + +1.0 2,864,220 + AO353_12935 0.17 -0.3 2,864,320 + AO353_12935 0.28 -0.6 2,864,320 + AO353_12935 0.28 -2.3 2,864,320 + AO353_12935 0.28 -1.6 2,864,320 + AO353_12935 0.28 +0.5 2,864,335 + AO353_12935 0.29 -0.3 2,864,335 + AO353_12935 0.29 +0.5 2,864,335 + AO353_12935 0.29 -1.1 2,864,359 + AO353_12935 0.32 +1.3 2,864,523 + AO353_12935 0.49 +0.2 2,864,539 + AO353_12935 0.51 -1.3 2,864,775 + AO353_12935 0.75 -1.7 2,864,913 + AO353_12935 0.90 -0.7 2,864,913 + AO353_12935 0.90 -1.0 2,864,913 + AO353_12935 0.90 +0.2 2,864,925 + -0.7 2,864,925 + +2.7 2,864,925 + -0.6 2,865,043 + +0.2 2,865,043 + -0.2 2,865,043 + +0.7 2,865,043 + -0.1 2,865,044 - -1.3 2,865,045 + -0.4 2,865,045 + -1.7 2,865,045 + +0.4 2,865,045 + -1.3 2,865,046 - -0.3 2,865,046 - -1.8 2,865,046 - -1.1 2,865,046 - +1.3 2,865,046 - +1.7 2,865,049 + -0.6 2,865,049 + -0.8 2,865,049 + -1.1 2,865,049 + -1.0 2,865,049 + -1.3 2,865,049 + +0.7 2,865,050 - -0.6 2,865,050 - -0.1 2,865,050 - +1.5 2,865,096 + +0.4 2,865,096 + +0.9 2,865,097 - +0.2 2,865,103 - -1.4 2,865,130 + -2.3 2,865,131 - -0.7 2,865,161 + -1.7 2,865,161 + +0.6 2,865,161 + -0.6 2,865,161 + -0.5 2,865,161 + -0.4 2,865,162 - -0.5 2,865,162 - -1.6 2,865,162 - +0.2 2,865,162 - -0.6 2,865,162 - +1.7 2,865,162 - -0.3 2,865,162 - +0.2 2,865,173 + -1.0 2,865,173 + -0.4 2,865,173 + -1.1 2,865,173 + +1.7 2,865,174 - -0.8 2,865,174 - -1.6 2,865,195 + -1.1 2,865,195 + +0.0 2,865,196 - -1.3 2,865,196 - -1.2 2,865,196 - +1.4 2,865,196 - -0.6 2,865,196 - -1.1 2,865,331 + AO353_12940 0.22 -0.6 2,865,362 + AO353_12940 0.25 -0.4 2,865,362 + AO353_12940 0.25 -0.2 2,865,363 - AO353_12940 0.25 +0.9 2,865,363 - AO353_12940 0.25 +0.5 2,865,363 - AO353_12940 0.25 -0.8 2,865,440 + AO353_12940 0.32 -1.3 2,865,563 + AO353_12940 0.43 -1.4 2,865,563 + AO353_12940 0.43 -2.3 2,865,563 + AO353_12940 0.43 +0.4 2,865,563 + AO353_12940 0.43 -1.1 2,865,564 - AO353_12940 0.43 +0.4 2,865,692 + AO353_12940 0.54 -0.2 2,865,693 - AO353_12940 0.55 +0.6 2,865,854 + AO353_12940 0.69 +0.3 2,865,854 + AO353_12940 0.69 +0.3 2,865,854 + AO353_12940 0.69 -1.1 2,865,854 + AO353_12940 0.69 -1.2 2,865,855 - AO353_12940 0.69 +1.7 2,865,855 - AO353_12940 0.69 +0.2 2,865,855 - AO353_12940 0.69 +0.2 2,865,855 - AO353_12940 0.69 -1.5 2,865,855 - AO353_12940 0.69 -1.4 2,865,855 - AO353_12940 0.69 +0.7 2,865,857 + AO353_12940 0.69 -0.7 2,865,857 + AO353_12940 0.69 +0.7 2,865,858 - AO353_12940 0.69 +0.7
Or see this region's nucleotide sequence