Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12475 and AO353_12480 overlap by 1 nucleotides AO353_12480 and AO353_12485 overlap by 4 nucleotides AO353_12485 and AO353_12490 overlap by 4 nucleotides
AO353_12475: AO353_12475 - pilus assembly protein PilM, at 2,745,782 to 2,746,846
_12475
AO353_12480: AO353_12480 - pilus assembly protein PilN, at 2,746,846 to 2,747,412
_12480
AO353_12485: AO353_12485 - pilus assembly protein PilP, at 2,747,409 to 2,748,032
_12485
AO353_12490: AO353_12490 - pilus assembly protein PilP, at 2,748,029 to 2,748,556
_12490
Position (kb)
2746
2747
2748 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2745.861 kb on + strand at 2745.861 kb on + strand at 2745.862 kb on - strand at 2745.862 kb on - strand at 2745.862 kb on - strand at 2745.896 kb on + strand, within AO353_12475 at 2745.903 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.121 kb on + strand, within AO353_12475 at 2746.122 kb on - strand, within AO353_12475 at 2746.122 kb on - strand, within AO353_12475 at 2746.122 kb on - strand, within AO353_12475 at 2746.122 kb on - strand, within AO353_12475 at 2746.122 kb on - strand, within AO353_12475 at 2746.122 kb on - strand, within AO353_12475 at 2746.122 kb on - strand, within AO353_12475 at 2746.203 kb on + strand, within AO353_12475 at 2746.203 kb on + strand, within AO353_12475 at 2746.203 kb on + strand, within AO353_12475 at 2746.203 kb on + strand, within AO353_12475 at 2746.203 kb on + strand, within AO353_12475 at 2746.204 kb on - strand, within AO353_12475 at 2746.204 kb on - strand, within AO353_12475 at 2746.204 kb on - strand, within AO353_12475 at 2746.204 kb on - strand, within AO353_12475 at 2746.204 kb on - strand, within AO353_12475 at 2746.204 kb on - strand, within AO353_12475 at 2746.204 kb on - strand, within AO353_12475 at 2746.430 kb on + strand, within AO353_12475 at 2746.430 kb on + strand, within AO353_12475 at 2746.430 kb on + strand, within AO353_12475 at 2746.431 kb on - strand, within AO353_12475 at 2746.431 kb on - strand, within AO353_12475 at 2746.431 kb on - strand, within AO353_12475 at 2746.431 kb on - strand, within AO353_12475 at 2746.431 kb on - strand, within AO353_12475 at 2746.431 kb on - strand, within AO353_12475 at 2746.487 kb on + strand, within AO353_12475 at 2746.547 kb on + strand, within AO353_12475 at 2746.547 kb on + strand, within AO353_12475 at 2746.547 kb on + strand, within AO353_12475 at 2746.547 kb on + strand, within AO353_12475 at 2746.547 kb on + strand, within AO353_12475 at 2746.548 kb on - strand, within AO353_12475 at 2746.548 kb on - strand, within AO353_12475 at 2746.634 kb on + strand, within AO353_12475 at 2746.634 kb on + strand, within AO353_12475 at 2746.634 kb on + strand, within AO353_12475 at 2746.634 kb on + strand, within AO353_12475 at 2746.634 kb on + strand, within AO353_12475 at 2746.634 kb on + strand, within AO353_12475 at 2746.634 kb on + strand, within AO353_12475 at 2746.635 kb on - strand, within AO353_12475 at 2746.635 kb on - strand, within AO353_12475 at 2746.635 kb on - strand, within AO353_12475 at 2746.635 kb on - strand, within AO353_12475 at 2746.635 kb on - strand, within AO353_12475 at 2746.635 kb on - strand, within AO353_12475 at 2746.649 kb on + strand, within AO353_12475 at 2746.649 kb on + strand, within AO353_12475 at 2746.649 kb on + strand, within AO353_12475 at 2746.649 kb on + strand, within AO353_12475 at 2746.649 kb on + strand, within AO353_12475 at 2746.650 kb on - strand, within AO353_12475 at 2746.650 kb on - strand, within AO353_12475 at 2746.650 kb on - strand, within AO353_12475 at 2746.650 kb on - strand, within AO353_12475 at 2746.650 kb on - strand, within AO353_12475 at 2746.949 kb on + strand, within AO353_12480 at 2746.949 kb on + strand, within AO353_12480 at 2747.011 kb on + strand, within AO353_12480 at 2747.011 kb on + strand, within AO353_12480 at 2747.011 kb on + strand, within AO353_12480 at 2747.012 kb on - strand, within AO353_12480 at 2747.012 kb on - strand, within AO353_12480 at 2747.012 kb on - strand, within AO353_12480 at 2747.146 kb on - strand, within AO353_12480 at 2747.146 kb on - strand, within AO353_12480 at 2747.146 kb on - strand, within AO353_12480 at 2747.146 kb on - strand, within AO353_12480 at 2747.185 kb on + strand, within AO353_12480 at 2747.185 kb on + strand, within AO353_12480 at 2747.185 kb on + strand, within AO353_12480 at 2747.185 kb on + strand, within AO353_12480 at 2747.185 kb on + strand, within AO353_12480 at 2747.185 kb on + strand, within AO353_12480 at 2747.186 kb on - strand, within AO353_12480 at 2747.186 kb on - strand, within AO353_12480 at 2747.186 kb on - strand, within AO353_12480 at 2747.186 kb on - strand, within AO353_12480 at 2747.186 kb on - strand, within AO353_12480 at 2747.186 kb on - strand, within AO353_12480 at 2747.212 kb on - strand, within AO353_12480 at 2747.212 kb on - strand, within AO353_12480 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.476 kb on + strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.477 kb on - strand, within AO353_12485 at 2747.547 kb on + strand, within AO353_12485 at 2747.548 kb on - strand, within AO353_12485 at 2747.556 kb on + strand, within AO353_12485 at 2747.556 kb on + strand, within AO353_12485 at 2747.557 kb on - strand, within AO353_12485 at 2747.661 kb on + strand, within AO353_12485 at 2747.661 kb on + strand, within AO353_12485 at 2747.661 kb on + strand, within AO353_12485 at 2747.662 kb on - strand, within AO353_12485 at 2747.662 kb on - strand, within AO353_12485 at 2747.662 kb on - strand, within AO353_12485 at 2747.753 kb on + strand, within AO353_12485 at 2747.753 kb on + strand, within AO353_12485 at 2747.753 kb on + strand, within AO353_12485 at 2747.753 kb on + strand, within AO353_12485 at 2747.753 kb on + strand, within AO353_12485 at 2747.754 kb on - strand, within AO353_12485 at 2747.754 kb on - strand, within AO353_12485 at 2747.754 kb on - strand, within AO353_12485 at 2747.754 kb on - strand, within AO353_12485 at 2747.754 kb on - strand, within AO353_12485 at 2747.754 kb on - strand, within AO353_12485 at 2747.829 kb on + strand, within AO353_12485 at 2747.829 kb on + strand, within AO353_12485 at 2747.829 kb on + strand, within AO353_12485 at 2747.829 kb on + strand, within AO353_12485 at 2747.829 kb on + strand, within AO353_12485 at 2747.829 kb on + strand, within AO353_12485 at 2747.829 kb on + strand, within AO353_12485 at 2747.830 kb on - strand, within AO353_12485 at 2747.830 kb on - strand, within AO353_12485 at 2747.830 kb on - strand, within AO353_12485 at 2747.840 kb on - strand, within AO353_12485 at 2747.869 kb on - strand, within AO353_12485 at 2747.869 kb on - strand, within AO353_12485 at 2747.869 kb on - strand, within AO353_12485 at 2748.000 kb on + strand at 2748.001 kb on - strand at 2748.006 kb on + strand at 2748.007 kb on - strand at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.119 kb on + strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.120 kb on - strand, within AO353_12490 at 2748.197 kb on + strand, within AO353_12490 at 2748.197 kb on + strand, within AO353_12490 at 2748.198 kb on - strand, within AO353_12490 at 2748.198 kb on - strand, within AO353_12490 at 2748.198 kb on - strand, within AO353_12490 at 2748.198 kb on - strand, within AO353_12490 at 2748.308 kb on + strand, within AO353_12490 at 2748.309 kb on - strand, within AO353_12490 at 2748.309 kb on - strand, within AO353_12490 at 2748.309 kb on - strand, within AO353_12490 at 2748.309 kb on - strand, within AO353_12490 at 2748.309 kb on - strand, within AO353_12490 at 2748.353 kb on - strand, within AO353_12490
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 2,745,861 + +1.4 2,745,861 + +1.1 2,745,862 - +0.2 2,745,862 - -1.0 2,745,862 - +0.5 2,745,896 + AO353_12475 0.11 -0.4 2,745,903 + AO353_12475 0.11 -0.8 2,746,121 + AO353_12475 0.32 -0.5 2,746,121 + AO353_12475 0.32 +1.5 2,746,121 + AO353_12475 0.32 +0.6 2,746,121 + AO353_12475 0.32 +0.4 2,746,121 + AO353_12475 0.32 -0.7 2,746,121 + AO353_12475 0.32 +0.6 2,746,121 + AO353_12475 0.32 +0.2 2,746,121 + AO353_12475 0.32 +0.8 2,746,121 + AO353_12475 0.32 +1.3 2,746,121 + AO353_12475 0.32 +0.8 2,746,121 + AO353_12475 0.32 -0.5 2,746,122 - AO353_12475 0.32 +1.2 2,746,122 - AO353_12475 0.32 +0.6 2,746,122 - AO353_12475 0.32 +0.2 2,746,122 - AO353_12475 0.32 -0.1 2,746,122 - AO353_12475 0.32 -0.4 2,746,122 - AO353_12475 0.32 +0.7 2,746,122 - AO353_12475 0.32 -0.1 2,746,203 + AO353_12475 0.40 -0.1 2,746,203 + AO353_12475 0.40 +1.0 2,746,203 + AO353_12475 0.40 +0.6 2,746,203 + AO353_12475 0.40 +0.3 2,746,203 + AO353_12475 0.40 -1.1 2,746,204 - AO353_12475 0.40 +0.2 2,746,204 - AO353_12475 0.40 -0.2 2,746,204 - AO353_12475 0.40 -0.0 2,746,204 - AO353_12475 0.40 +1.1 2,746,204 - AO353_12475 0.40 +1.5 2,746,204 - AO353_12475 0.40 +0.4 2,746,204 - AO353_12475 0.40 -0.8 2,746,430 + AO353_12475 0.61 +0.6 2,746,430 + AO353_12475 0.61 +1.8 2,746,430 + AO353_12475 0.61 +0.6 2,746,431 - AO353_12475 0.61 -1.0 2,746,431 - AO353_12475 0.61 +0.5 2,746,431 - AO353_12475 0.61 +0.1 2,746,431 - AO353_12475 0.61 +1.5 2,746,431 - AO353_12475 0.61 +0.6 2,746,431 - AO353_12475 0.61 +0.0 2,746,487 + AO353_12475 0.66 +0.6 2,746,547 + AO353_12475 0.72 +1.8 2,746,547 + AO353_12475 0.72 -0.8 2,746,547 + AO353_12475 0.72 -0.5 2,746,547 + AO353_12475 0.72 +0.3 2,746,547 + AO353_12475 0.72 -0.3 2,746,548 - AO353_12475 0.72 -1.2 2,746,548 - AO353_12475 0.72 +1.1 2,746,634 + AO353_12475 0.80 +0.2 2,746,634 + AO353_12475 0.80 +0.0 2,746,634 + AO353_12475 0.80 +0.4 2,746,634 + AO353_12475 0.80 +0.1 2,746,634 + AO353_12475 0.80 +1.0 2,746,634 + AO353_12475 0.80 -0.9 2,746,634 + AO353_12475 0.80 -0.5 2,746,635 - AO353_12475 0.80 -0.8 2,746,635 - AO353_12475 0.80 -0.0 2,746,635 - AO353_12475 0.80 +0.0 2,746,635 - AO353_12475 0.80 +0.0 2,746,635 - AO353_12475 0.80 +0.1 2,746,635 - AO353_12475 0.80 -1.0 2,746,649 + AO353_12475 0.81 -0.7 2,746,649 + AO353_12475 0.81 +0.5 2,746,649 + AO353_12475 0.81 -0.8 2,746,649 + AO353_12475 0.81 +1.1 2,746,649 + AO353_12475 0.81 -0.3 2,746,650 - AO353_12475 0.82 -0.3 2,746,650 - AO353_12475 0.82 -1.0 2,746,650 - AO353_12475 0.82 +0.2 2,746,650 - AO353_12475 0.82 +0.2 2,746,650 - AO353_12475 0.82 +0.8 2,746,949 + AO353_12480 0.18 +0.8 2,746,949 + AO353_12480 0.18 +2.2 2,747,011 + AO353_12480 0.29 +0.5 2,747,011 + AO353_12480 0.29 +0.5 2,747,011 + AO353_12480 0.29 +0.6 2,747,012 - AO353_12480 0.29 -1.0 2,747,012 - AO353_12480 0.29 +1.1 2,747,012 - AO353_12480 0.29 -0.4 2,747,146 - AO353_12480 0.53 +1.2 2,747,146 - AO353_12480 0.53 +0.2 2,747,146 - AO353_12480 0.53 +0.1 2,747,146 - AO353_12480 0.53 -0.1 2,747,185 + AO353_12480 0.60 +0.3 2,747,185 + AO353_12480 0.60 +0.2 2,747,185 + AO353_12480 0.60 -0.3 2,747,185 + AO353_12480 0.60 +1.0 2,747,185 + AO353_12480 0.60 -0.3 2,747,185 + AO353_12480 0.60 +0.4 2,747,186 - AO353_12480 0.60 +1.2 2,747,186 - AO353_12480 0.60 +0.5 2,747,186 - AO353_12480 0.60 +0.2 2,747,186 - AO353_12480 0.60 +1.1 2,747,186 - AO353_12480 0.60 +0.2 2,747,186 - AO353_12480 0.60 +1.0 2,747,212 - AO353_12480 0.65 +0.2 2,747,212 - AO353_12480 0.65 +1.1 2,747,476 + AO353_12485 0.11 -1.1 2,747,476 + AO353_12485 0.11 +0.1 2,747,476 + AO353_12485 0.11 -0.5 2,747,476 + AO353_12485 0.11 -0.4 2,747,476 + AO353_12485 0.11 +0.5 2,747,476 + AO353_12485 0.11 -0.5 2,747,476 + AO353_12485 0.11 -0.7 2,747,476 + AO353_12485 0.11 -2.1 2,747,476 + AO353_12485 0.11 +1.1 2,747,476 + AO353_12485 0.11 -0.0 2,747,476 + AO353_12485 0.11 +0.2 2,747,476 + AO353_12485 0.11 -0.3 2,747,476 + AO353_12485 0.11 +0.1 2,747,477 - AO353_12485 0.11 -0.4 2,747,477 - AO353_12485 0.11 -0.9 2,747,477 - AO353_12485 0.11 +0.1 2,747,477 - AO353_12485 0.11 +0.2 2,747,477 - AO353_12485 0.11 -1.1 2,747,477 - AO353_12485 0.11 +0.2 2,747,477 - AO353_12485 0.11 -0.2 2,747,477 - AO353_12485 0.11 -0.2 2,747,477 - AO353_12485 0.11 +1.2 2,747,477 - AO353_12485 0.11 +0.3 2,747,477 - AO353_12485 0.11 +0.6 2,747,477 - AO353_12485 0.11 -0.1 2,747,477 - AO353_12485 0.11 +0.2 2,747,477 - AO353_12485 0.11 +0.8 2,747,477 - AO353_12485 0.11 -0.4 2,747,477 - AO353_12485 0.11 -1.2 2,747,477 - AO353_12485 0.11 +1.2 2,747,477 - AO353_12485 0.11 -0.2 2,747,477 - AO353_12485 0.11 -0.5 2,747,477 - AO353_12485 0.11 +0.9 2,747,477 - AO353_12485 0.11 +0.6 2,747,547 + AO353_12485 0.22 -0.4 2,747,548 - AO353_12485 0.22 -0.9 2,747,556 + AO353_12485 0.24 -0.8 2,747,556 + AO353_12485 0.24 -0.2 2,747,557 - AO353_12485 0.24 -1.0 2,747,661 + AO353_12485 0.40 -0.2 2,747,661 + AO353_12485 0.40 -0.7 2,747,661 + AO353_12485 0.40 -1.0 2,747,662 - AO353_12485 0.41 -0.1 2,747,662 - AO353_12485 0.41 -0.6 2,747,662 - AO353_12485 0.41 +0.1 2,747,753 + AO353_12485 0.55 +1.1 2,747,753 + AO353_12485 0.55 -1.1 2,747,753 + AO353_12485 0.55 -0.3 2,747,753 + AO353_12485 0.55 +1.5 2,747,753 + AO353_12485 0.55 +0.2 2,747,754 - AO353_12485 0.55 -1.1 2,747,754 - AO353_12485 0.55 +0.1 2,747,754 - AO353_12485 0.55 -1.1 2,747,754 - AO353_12485 0.55 +0.5 2,747,754 - AO353_12485 0.55 +0.1 2,747,754 - AO353_12485 0.55 -1.3 2,747,829 + AO353_12485 0.67 -0.4 2,747,829 + AO353_12485 0.67 +0.0 2,747,829 + AO353_12485 0.67 -1.2 2,747,829 + AO353_12485 0.67 -0.1 2,747,829 + AO353_12485 0.67 -0.0 2,747,829 + AO353_12485 0.67 -0.5 2,747,829 + AO353_12485 0.67 +0.5 2,747,830 - AO353_12485 0.67 +0.1 2,747,830 - AO353_12485 0.67 -1.1 2,747,830 - AO353_12485 0.67 -0.4 2,747,840 - AO353_12485 0.69 -0.5 2,747,869 - AO353_12485 0.74 -1.2 2,747,869 - AO353_12485 0.74 -0.9 2,747,869 - AO353_12485 0.74 +0.2 2,748,000 + +1.1 2,748,001 - +0.1 2,748,006 + +0.4 2,748,007 - -0.4 2,748,119 + AO353_12490 0.17 +0.2 2,748,119 + AO353_12490 0.17 -0.7 2,748,119 + AO353_12490 0.17 +1.1 2,748,119 + AO353_12490 0.17 -0.8 2,748,119 + AO353_12490 0.17 +0.2 2,748,119 + AO353_12490 0.17 +0.4 2,748,119 + AO353_12490 0.17 +0.5 2,748,119 + AO353_12490 0.17 +0.6 2,748,119 + AO353_12490 0.17 +1.2 2,748,120 - AO353_12490 0.17 +1.2 2,748,120 - AO353_12490 0.17 +0.8 2,748,120 - AO353_12490 0.17 -1.0 2,748,120 - AO353_12490 0.17 -0.3 2,748,120 - AO353_12490 0.17 -0.7 2,748,120 - AO353_12490 0.17 -0.9 2,748,120 - AO353_12490 0.17 +0.6 2,748,120 - AO353_12490 0.17 -0.1 2,748,120 - AO353_12490 0.17 +0.3 2,748,120 - AO353_12490 0.17 -0.5 2,748,197 + AO353_12490 0.32 +1.8 2,748,197 + AO353_12490 0.32 -1.5 2,748,198 - AO353_12490 0.32 +0.2 2,748,198 - AO353_12490 0.32 -0.6 2,748,198 - AO353_12490 0.32 +0.3 2,748,198 - AO353_12490 0.32 -1.3 2,748,308 + AO353_12490 0.53 +1.8 2,748,309 - AO353_12490 0.53 +0.3 2,748,309 - AO353_12490 0.53 +0.5 2,748,309 - AO353_12490 0.53 -1.5 2,748,309 - AO353_12490 0.53 -0.9 2,748,309 - AO353_12490 0.53 -0.4 2,748,353 - AO353_12490 0.61 -0.2
Or see this region's nucleotide sequence