Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12325 and AO353_12330 overlap by 8 nucleotides AO353_12330 and AO353_12335 are separated by 154 nucleotides AO353_12335 and AO353_12340 are separated by 231 nucleotides AO353_12340 and AO353_12345 overlap by 4 nucleotides
AO353_12325: AO353_12325 - ABC transporter permease, at 2,713,639 to 2,714,598
_12325
AO353_12330: AO353_12330 - peptide ABC transporter ATP-binding protein, at 2,714,591 to 2,715,325
_12330
AO353_12335: AO353_12335 - chemotaxis protein, at 2,715,480 to 2,717,396
_12335
AO353_12340: AO353_12340 - 16S rRNA methyltransferase, at 2,717,628 to 2,718,335
_12340
AO353_12345: AO353_12345 - twin-arginine protein translocation system subunit TatC, at 2,718,332 to 2,719,126
_12345
Position (kb)
2715
2716
2717
2718 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2714.527 kb on + strand at 2714.527 kb on + strand at 2714.527 kb on + strand at 2714.528 kb on - strand at 2714.528 kb on - strand at 2714.528 kb on - strand at 2714.528 kb on - strand at 2715.067 kb on + strand, within AO353_12330 at 2715.067 kb on + strand, within AO353_12330 at 2715.067 kb on + strand, within AO353_12330 at 2715.068 kb on - strand, within AO353_12330 at 2715.068 kb on - strand, within AO353_12330 at 2715.068 kb on - strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.073 kb on + strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.074 kb on - strand, within AO353_12330 at 2715.323 kb on + strand at 2715.324 kb on - strand at 2715.369 kb on + strand at 2715.369 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.377 kb on + strand at 2715.378 kb on + strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.378 kb on - strand at 2715.414 kb on + strand at 2715.414 kb on + strand at 2715.414 kb on + strand at 2715.414 kb on + strand at 2715.415 kb on - strand at 2715.467 kb on + strand at 2715.467 kb on + strand at 2715.467 kb on + strand at 2716.439 kb on + strand, within AO353_12335 at 2716.439 kb on + strand, within AO353_12335 at 2716.440 kb on - strand, within AO353_12335 at 2716.440 kb on - strand, within AO353_12335 at 2716.771 kb on + strand, within AO353_12335 at 2716.771 kb on + strand, within AO353_12335 at 2716.771 kb on + strand, within AO353_12335 at 2716.771 kb on + strand, within AO353_12335 at 2716.772 kb on - strand, within AO353_12335 at 2716.772 kb on - strand, within AO353_12335 at 2716.772 kb on - strand, within AO353_12335 at 2716.772 kb on - strand, within AO353_12335 at 2716.831 kb on + strand, within AO353_12335 at 2716.831 kb on + strand, within AO353_12335 at 2716.831 kb on + strand, within AO353_12335 at 2716.831 kb on + strand, within AO353_12335 at 2716.832 kb on - strand, within AO353_12335 at 2716.832 kb on - strand, within AO353_12335 at 2716.832 kb on - strand, within AO353_12335 at 2716.832 kb on - strand, within AO353_12335 at 2716.832 kb on - strand, within AO353_12335 at 2716.832 kb on - strand, within AO353_12335 at 2716.837 kb on + strand, within AO353_12335 at 2716.837 kb on + strand, within AO353_12335 at 2717.028 kb on - strand, within AO353_12335 at 2717.041 kb on + strand, within AO353_12335 at 2717.041 kb on + strand, within AO353_12335 at 2717.041 kb on + strand, within AO353_12335 at 2717.041 kb on + strand, within AO353_12335 at 2717.041 kb on + strand, within AO353_12335 at 2717.041 kb on + strand, within AO353_12335 at 2717.041 kb on + strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.042 kb on - strand, within AO353_12335 at 2717.188 kb on + strand, within AO353_12335 at 2717.188 kb on + strand, within AO353_12335 at 2717.189 kb on - strand, within AO353_12335 at 2717.189 kb on - strand, within AO353_12335 at 2717.189 kb on - strand, within AO353_12335 at 2717.204 kb on + strand, within AO353_12335 at 2717.205 kb on - strand at 2717.205 kb on - strand at 2717.205 kb on - strand at 2717.240 kb on + strand at 2717.240 kb on + strand at 2717.240 kb on + strand at 2717.240 kb on + strand at 2717.241 kb on - strand at 2717.241 kb on - strand at 2717.241 kb on - strand at 2717.241 kb on - strand at 2717.243 kb on - strand at 2717.392 kb on + strand at 2717.392 kb on + strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.393 kb on - strand at 2717.411 kb on - strand at 2717.411 kb on - strand at 2717.421 kb on + strand at 2717.421 kb on + strand at 2717.421 kb on + strand at 2717.422 kb on - strand at 2717.422 kb on - strand at 2717.422 kb on - strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.431 kb on + strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.432 kb on - strand at 2717.433 kb on + strand at 2717.433 kb on + strand at 2717.433 kb on + strand at 2717.433 kb on + strand at 2717.434 kb on - strand at 2717.434 kb on - strand at 2717.434 kb on - strand at 2717.443 kb on - strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.466 kb on + strand at 2717.541 kb on + strand at 2717.541 kb on + strand at 2717.541 kb on + strand at 2717.630 kb on - strand at 2717.630 kb on - strand at 2717.630 kb on - strand at 2717.735 kb on - strand, within AO353_12340
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 2,714,527 + -0.5 2,714,527 + +0.2 2,714,527 + -0.1 2,714,528 - +0.4 2,714,528 - +0.2 2,714,528 - -0.3 2,714,528 - -0.4 2,715,067 + AO353_12330 0.65 -0.1 2,715,067 + AO353_12330 0.65 -0.1 2,715,067 + AO353_12330 0.65 -0.8 2,715,068 - AO353_12330 0.65 -0.3 2,715,068 - AO353_12330 0.65 -0.0 2,715,068 - AO353_12330 0.65 -0.3 2,715,073 + AO353_12330 0.66 -1.5 2,715,073 + AO353_12330 0.66 -1.4 2,715,073 + AO353_12330 0.66 +0.7 2,715,073 + AO353_12330 0.66 +0.1 2,715,073 + AO353_12330 0.66 -1.0 2,715,073 + AO353_12330 0.66 +0.8 2,715,073 + AO353_12330 0.66 +0.9 2,715,073 + AO353_12330 0.66 -0.7 2,715,074 - AO353_12330 0.66 -0.1 2,715,074 - AO353_12330 0.66 +0.5 2,715,074 - AO353_12330 0.66 +1.8 2,715,074 - AO353_12330 0.66 -1.7 2,715,074 - AO353_12330 0.66 +0.2 2,715,074 - AO353_12330 0.66 -0.9 2,715,074 - AO353_12330 0.66 +0.7 2,715,074 - AO353_12330 0.66 +0.2 2,715,074 - AO353_12330 0.66 +0.2 2,715,323 + -1.4 2,715,324 - -0.5 2,715,369 + -0.8 2,715,369 + +1.3 2,715,377 + +0.4 2,715,377 + -0.2 2,715,377 + +0.9 2,715,377 + +0.0 2,715,377 + -0.8 2,715,377 + -0.7 2,715,377 + +1.6 2,715,378 + -0.3 2,715,378 - -0.9 2,715,378 - -0.8 2,715,378 - -1.0 2,715,378 - -1.2 2,715,378 - +1.1 2,715,378 - +1.4 2,715,378 - -0.1 2,715,414 + +1.2 2,715,414 + +0.6 2,715,414 + +0.2 2,715,414 + +2.5 2,715,415 - -0.5 2,715,467 + +0.6 2,715,467 + -2.1 2,715,467 + +0.2 2,716,439 + AO353_12335 0.50 -1.4 2,716,439 + AO353_12335 0.50 +0.3 2,716,440 - AO353_12335 0.50 -0.5 2,716,440 - AO353_12335 0.50 +0.8 2,716,771 + AO353_12335 0.67 +0.9 2,716,771 + AO353_12335 0.67 +0.8 2,716,771 + AO353_12335 0.67 -0.1 2,716,771 + AO353_12335 0.67 +1.0 2,716,772 - AO353_12335 0.67 -0.7 2,716,772 - AO353_12335 0.67 -0.1 2,716,772 - AO353_12335 0.67 +0.2 2,716,772 - AO353_12335 0.67 +0.2 2,716,831 + AO353_12335 0.70 +0.7 2,716,831 + AO353_12335 0.70 +0.5 2,716,831 + AO353_12335 0.70 +0.0 2,716,831 + AO353_12335 0.70 +0.2 2,716,832 - AO353_12335 0.71 -0.5 2,716,832 - AO353_12335 0.71 -2.2 2,716,832 - AO353_12335 0.71 +0.5 2,716,832 - AO353_12335 0.71 -0.0 2,716,832 - AO353_12335 0.71 +1.4 2,716,832 - AO353_12335 0.71 +2.5 2,716,837 + AO353_12335 0.71 -1.0 2,716,837 + AO353_12335 0.71 -0.5 2,717,028 - AO353_12335 0.81 +0.6 2,717,041 + AO353_12335 0.81 +1.4 2,717,041 + AO353_12335 0.81 +1.6 2,717,041 + AO353_12335 0.81 -0.5 2,717,041 + AO353_12335 0.81 +0.1 2,717,041 + AO353_12335 0.81 +0.6 2,717,041 + AO353_12335 0.81 -1.2 2,717,041 + AO353_12335 0.81 -0.1 2,717,042 - AO353_12335 0.81 -0.1 2,717,042 - AO353_12335 0.81 +0.7 2,717,042 - AO353_12335 0.81 +0.7 2,717,042 - AO353_12335 0.81 +0.4 2,717,042 - AO353_12335 0.81 +0.6 2,717,042 - AO353_12335 0.81 -1.0 2,717,042 - AO353_12335 0.81 +0.7 2,717,042 - AO353_12335 0.81 -0.4 2,717,042 - AO353_12335 0.81 +0.6 2,717,188 + AO353_12335 0.89 +1.4 2,717,188 + AO353_12335 0.89 +1.2 2,717,189 - AO353_12335 0.89 +1.0 2,717,189 - AO353_12335 0.89 +0.6 2,717,189 - AO353_12335 0.89 +0.7 2,717,204 + AO353_12335 0.90 +2.8 2,717,205 - -0.2 2,717,205 - +1.5 2,717,205 - -0.5 2,717,240 + -0.9 2,717,240 + -2.1 2,717,240 + -1.2 2,717,240 + -0.3 2,717,241 - +0.1 2,717,241 - -0.7 2,717,241 - -1.3 2,717,241 - +0.0 2,717,243 - +0.1 2,717,392 + +1.5 2,717,392 + +0.2 2,717,393 - -0.5 2,717,393 - -2.1 2,717,393 - +0.8 2,717,393 - +0.3 2,717,393 - -2.1 2,717,393 - +0.0 2,717,393 - +0.1 2,717,411 - -0.9 2,717,411 - -0.5 2,717,421 + +0.8 2,717,421 + -0.4 2,717,421 + -0.3 2,717,422 - -0.8 2,717,422 - -0.7 2,717,422 - -1.0 2,717,431 + +0.8 2,717,431 + -0.5 2,717,431 + -0.2 2,717,431 + -1.2 2,717,431 + -0.9 2,717,431 + +0.5 2,717,431 + -0.4 2,717,431 + +0.0 2,717,432 - +0.0 2,717,432 - +0.5 2,717,432 - +0.5 2,717,432 - -1.1 2,717,432 - +0.6 2,717,433 + -0.4 2,717,433 + -0.1 2,717,433 + -0.4 2,717,433 + -2.4 2,717,434 - -0.7 2,717,434 - -0.2 2,717,434 - -0.8 2,717,443 - -0.2 2,717,466 + +0.0 2,717,466 + -0.4 2,717,466 + -0.6 2,717,466 + -0.4 2,717,466 + -0.7 2,717,541 + +0.2 2,717,541 + +1.8 2,717,541 + -1.2 2,717,630 - -1.7 2,717,630 - -0.8 2,717,630 - -1.3 2,717,735 - AO353_12340 0.15 +1.0
Or see this region's nucleotide sequence