Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10920 and AO353_10925 are separated by 60 nucleotides AO353_10925 and AO353_10930 are separated by 74 nucleotides AO353_10930 and AO353_10935 are separated by 438 nucleotides
AO353_10920: AO353_10920 - homoserine kinase, at 2,383,562 to 2,384,512
_10920
AO353_10925: AO353_10925 - hypothetical protein, at 2,384,573 to 2,384,863
_10925
AO353_10930: AO353_10930 - DNA polymerase I, at 2,384,938 to 2,387,709
_10930
AO353_10935: AO353_10935 - GTP-binding protein, at 2,388,148 to 2,388,792
_10935
Position (kb)
2384
2385
2386
2387
2388 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2384.560 kb on + strand at 2384.561 kb on - strand at 2384.566 kb on + strand at 2384.567 kb on - strand at 2384.567 kb on - strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.574 kb on + strand at 2384.575 kb on - strand at 2384.575 kb on - strand at 2384.575 kb on - strand at 2384.584 kb on + strand at 2384.585 kb on - strand at 2384.611 kb on + strand, within AO353_10925 at 2384.611 kb on + strand, within AO353_10925 at 2384.611 kb on + strand, within AO353_10925 at 2384.612 kb on - strand, within AO353_10925 at 2384.612 kb on - strand, within AO353_10925 at 2384.633 kb on - strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.634 kb on + strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.635 kb on - strand, within AO353_10925 at 2384.661 kb on - strand, within AO353_10925 at 2384.706 kb on + strand, within AO353_10925 at 2384.707 kb on - strand, within AO353_10925 at 2384.707 kb on - strand, within AO353_10925 at 2384.841 kb on - strand at 2384.866 kb on + strand at 2384.866 kb on + strand at 2384.867 kb on - strand at 2384.867 kb on - strand at 2384.903 kb on + strand at 2385.883 kb on + strand, within AO353_10930 at 2385.883 kb on + strand, within AO353_10930 at 2385.883 kb on + strand, within AO353_10930 at 2385.884 kb on - strand, within AO353_10930 at 2385.884 kb on - strand, within AO353_10930 at 2385.884 kb on - strand, within AO353_10930 at 2386.258 kb on + strand, within AO353_10930 at 2386.258 kb on + strand, within AO353_10930 at 2386.258 kb on + strand, within AO353_10930 at 2386.258 kb on + strand, within AO353_10930 at 2386.259 kb on - strand, within AO353_10930 at 2386.259 kb on - strand, within AO353_10930 at 2386.259 kb on - strand, within AO353_10930 at 2386.259 kb on - strand, within AO353_10930 at 2386.259 kb on - strand, within AO353_10930 at 2386.259 kb on - strand, within AO353_10930 at 2386.312 kb on + strand, within AO353_10930 at 2386.312 kb on + strand, within AO353_10930 at 2386.312 kb on + strand, within AO353_10930 at 2386.313 kb on - strand, within AO353_10930 at 2386.313 kb on - strand, within AO353_10930 at 2386.313 kb on - strand, within AO353_10930 at 2386.313 kb on - strand, within AO353_10930 at 2386.321 kb on + strand, within AO353_10930 at 2386.321 kb on + strand, within AO353_10930 at 2386.321 kb on + strand, within AO353_10930 at 2386.409 kb on - strand, within AO353_10930 at 2386.409 kb on - strand, within AO353_10930 at 2386.799 kb on + strand, within AO353_10930 at 2386.799 kb on + strand, within AO353_10930 at 2386.840 kb on + strand, within AO353_10930 at 2386.840 kb on + strand, within AO353_10930 at 2386.841 kb on - strand, within AO353_10930 at 2386.841 kb on - strand, within AO353_10930 at 2386.890 kb on + strand, within AO353_10930 at 2386.890 kb on + strand, within AO353_10930 at 2386.890 kb on + strand, within AO353_10930 at 2386.890 kb on + strand, within AO353_10930 at 2386.897 kb on + strand, within AO353_10930 at 2386.897 kb on + strand, within AO353_10930 at 2387.017 kb on + strand, within AO353_10930 at 2387.019 kb on + strand, within AO353_10930 at 2387.038 kb on + strand, within AO353_10930 at 2387.218 kb on + strand, within AO353_10930 at 2387.281 kb on + strand, within AO353_10930 at 2387.281 kb on + strand, within AO353_10930 at 2387.281 kb on + strand, within AO353_10930 at 2387.281 kb on + strand, within AO353_10930 at 2387.323 kb on + strand, within AO353_10930 at 2387.375 kb on + strand, within AO353_10930 at 2387.375 kb on + strand, within AO353_10930 at 2387.392 kb on + strand, within AO353_10930 at 2387.392 kb on + strand, within AO353_10930 at 2387.392 kb on + strand, within AO353_10930 at 2387.392 kb on + strand, within AO353_10930 at 2387.576 kb on + strand at 2387.576 kb on + strand at 2387.657 kb on + strand at 2387.657 kb on + strand at 2387.657 kb on + strand at 2387.688 kb on + strand at 2387.688 kb on + strand at 2387.689 kb on - strand at 2387.707 kb on + strand at 2387.708 kb on - strand at 2387.708 kb on - strand at 2387.749 kb on + strand at 2387.749 kb on + strand at 2387.749 kb on + strand at 2387.750 kb on - strand at 2387.750 kb on - strand at 2387.750 kb on - strand at 2387.750 kb on - strand at 2387.782 kb on + strand at 2387.782 kb on + strand at 2387.782 kb on + strand at 2387.782 kb on + strand at 2387.783 kb on - strand at 2387.783 kb on - strand at 2387.783 kb on - strand at 2387.783 kb on - strand at 2387.813 kb on + strand at 2387.813 kb on + strand at 2387.814 kb on - strand at 2387.814 kb on - strand at 2387.836 kb on + strand at 2387.836 kb on + strand at 2387.836 kb on + strand at 2387.837 kb on - strand at 2387.837 kb on - strand at 2387.837 kb on - strand at 2387.837 kb on - strand at 2387.837 kb on - strand at 2387.837 kb on - strand at 2387.862 kb on + strand at 2387.863 kb on - strand at 2387.863 kb on - strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.895 kb on + strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.896 kb on - strand at 2387.905 kb on + strand at 2387.905 kb on + strand at 2387.905 kb on + strand at 2387.905 kb on + strand at 2387.905 kb on + strand at 2387.906 kb on - strand at 2387.906 kb on - strand at 2387.906 kb on - strand at 2387.906 kb on - strand at 2387.906 kb on - strand at 2387.906 kb on - strand at 2387.906 kb on - strand at 2387.906 kb on - strand at 2387.919 kb on + strand at 2387.919 kb on + strand at 2387.919 kb on + strand at 2387.919 kb on + strand at 2387.919 kb on + strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.920 kb on - strand at 2387.951 kb on + strand at 2387.951 kb on + strand at 2387.951 kb on + strand at 2387.951 kb on + strand at 2387.952 kb on - strand at 2387.952 kb on - strand at 2387.952 kb on - strand at 2387.952 kb on - strand at 2387.952 kb on - strand at 2387.963 kb on + strand at 2387.964 kb on - strand at 2387.964 kb on - strand at 2387.980 kb on + strand at 2387.980 kb on + strand at 2387.980 kb on + strand at 2387.980 kb on + strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2387.981 kb on - strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.059 kb on + strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.060 kb on - strand at 2388.067 kb on + strand at 2388.068 kb on - strand at 2388.127 kb on + strand at 2388.127 kb on + strand at 2388.127 kb on + strand at 2388.128 kb on - strand at 2388.128 kb on - strand at 2388.149 kb on + strand at 2388.149 kb on + strand at 2388.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 2,384,560 + +0.7 2,384,561 - -0.3 2,384,566 + -0.6 2,384,567 - +0.4 2,384,567 - -0.6 2,384,574 + +0.3 2,384,574 + -0.6 2,384,574 + -1.5 2,384,574 + -0.1 2,384,574 + -0.7 2,384,575 - +0.6 2,384,575 - +0.9 2,384,575 - -0.7 2,384,584 + -1.0 2,384,585 - +1.0 2,384,611 + AO353_10925 0.13 +0.3 2,384,611 + AO353_10925 0.13 +0.6 2,384,611 + AO353_10925 0.13 -1.1 2,384,612 - AO353_10925 0.13 -0.5 2,384,612 - AO353_10925 0.13 +1.9 2,384,633 - AO353_10925 0.21 -0.6 2,384,634 + AO353_10925 0.21 -0.1 2,384,634 + AO353_10925 0.21 +0.1 2,384,634 + AO353_10925 0.21 +0.9 2,384,634 + AO353_10925 0.21 +0.7 2,384,634 + AO353_10925 0.21 +1.3 2,384,634 + AO353_10925 0.21 +0.5 2,384,634 + AO353_10925 0.21 -1.1 2,384,634 + AO353_10925 0.21 -0.5 2,384,634 + AO353_10925 0.21 -1.6 2,384,634 + AO353_10925 0.21 -0.4 2,384,634 + AO353_10925 0.21 -0.7 2,384,634 + AO353_10925 0.21 +0.4 2,384,634 + AO353_10925 0.21 -0.8 2,384,634 + AO353_10925 0.21 -0.4 2,384,634 + AO353_10925 0.21 +0.7 2,384,634 + AO353_10925 0.21 +0.2 2,384,634 + AO353_10925 0.21 +0.3 2,384,634 + AO353_10925 0.21 -0.8 2,384,634 + AO353_10925 0.21 +1.2 2,384,635 - AO353_10925 0.21 +0.2 2,384,635 - AO353_10925 0.21 -1.4 2,384,635 - AO353_10925 0.21 +0.3 2,384,635 - AO353_10925 0.21 -0.4 2,384,635 - AO353_10925 0.21 +0.7 2,384,635 - AO353_10925 0.21 -0.8 2,384,635 - AO353_10925 0.21 -0.9 2,384,635 - AO353_10925 0.21 -0.0 2,384,635 - AO353_10925 0.21 +0.1 2,384,635 - AO353_10925 0.21 +0.0 2,384,635 - AO353_10925 0.21 -1.4 2,384,635 - AO353_10925 0.21 +0.5 2,384,635 - AO353_10925 0.21 +1.3 2,384,635 - AO353_10925 0.21 -0.4 2,384,635 - AO353_10925 0.21 -0.4 2,384,635 - +2.9 2,384,635 - AO353_10925 0.21 -0.2 2,384,635 - AO353_10925 0.21 -1.1 2,384,635 - AO353_10925 0.21 -1.3 2,384,635 - AO353_10925 0.21 -0.3 2,384,635 - AO353_10925 0.21 +0.0 2,384,635 - AO353_10925 0.21 +0.2 2,384,635 - AO353_10925 0.21 -0.5 2,384,635 - AO353_10925 0.21 -0.2 2,384,661 - AO353_10925 0.30 -0.4 2,384,706 + AO353_10925 0.46 -0.4 2,384,707 - AO353_10925 0.46 -0.6 2,384,707 - AO353_10925 0.46 +0.6 2,384,841 - -0.3 2,384,866 + +0.4 2,384,866 + -0.1 2,384,867 - +0.4 2,384,867 - -0.3 2,384,903 + +1.1 2,385,883 + AO353_10930 0.34 -1.3 2,385,883 + AO353_10930 0.34 -1.0 2,385,883 + AO353_10930 0.34 +0.9 2,385,884 - AO353_10930 0.34 -0.3 2,385,884 - AO353_10930 0.34 +0.0 2,385,884 - AO353_10930 0.34 +0.3 2,386,258 + AO353_10930 0.48 -2.2 2,386,258 + AO353_10930 0.48 +0.4 2,386,258 + AO353_10930 0.48 +0.5 2,386,258 + AO353_10930 0.48 +0.9 2,386,259 - AO353_10930 0.48 -0.6 2,386,259 - AO353_10930 0.48 -0.3 2,386,259 - AO353_10930 0.48 -1.3 2,386,259 - AO353_10930 0.48 -0.1 2,386,259 - AO353_10930 0.48 +1.0 2,386,259 - AO353_10930 0.48 +0.2 2,386,312 + AO353_10930 0.50 -0.1 2,386,312 + AO353_10930 0.50 -1.0 2,386,312 + AO353_10930 0.50 -0.1 2,386,313 - AO353_10930 0.50 +0.9 2,386,313 - AO353_10930 0.50 -0.9 2,386,313 - AO353_10930 0.50 -0.9 2,386,313 - AO353_10930 0.50 +1.3 2,386,321 + AO353_10930 0.50 +1.8 2,386,321 + AO353_10930 0.50 +0.4 2,386,321 + AO353_10930 0.50 +0.5 2,386,409 - AO353_10930 0.53 +0.1 2,386,409 - AO353_10930 0.53 +0.3 2,386,799 + AO353_10930 0.67 +0.4 2,386,799 + AO353_10930 0.67 +2.2 2,386,840 + AO353_10930 0.69 +0.6 2,386,840 + AO353_10930 0.69 +2.3 2,386,841 - AO353_10930 0.69 -0.1 2,386,841 - AO353_10930 0.69 +1.5 2,386,890 + AO353_10930 0.70 -1.1 2,386,890 + AO353_10930 0.70 +1.2 2,386,890 + AO353_10930 0.70 +1.3 2,386,890 + AO353_10930 0.70 +1.6 2,386,897 + AO353_10930 0.71 +0.6 2,386,897 + AO353_10930 0.71 +1.6 2,387,017 + AO353_10930 0.75 -0.9 2,387,019 + AO353_10930 0.75 +0.9 2,387,038 + AO353_10930 0.76 +0.5 2,387,218 + AO353_10930 0.82 -0.3 2,387,281 + AO353_10930 0.85 +1.5 2,387,281 + AO353_10930 0.85 +0.9 2,387,281 + AO353_10930 0.85 +0.1 2,387,281 + AO353_10930 0.85 +0.1 2,387,323 + AO353_10930 0.86 +1.9 2,387,375 + AO353_10930 0.88 +0.9 2,387,375 + AO353_10930 0.88 +0.5 2,387,392 + AO353_10930 0.89 +0.7 2,387,392 + AO353_10930 0.89 -1.6 2,387,392 + AO353_10930 0.89 +0.7 2,387,392 + AO353_10930 0.89 +1.1 2,387,576 + -1.3 2,387,576 + +0.0 2,387,657 + +0.8 2,387,657 + +0.3 2,387,657 + +0.4 2,387,688 + +0.3 2,387,688 + -0.1 2,387,689 - -0.1 2,387,707 + +0.1 2,387,708 - -0.5 2,387,708 - -1.7 2,387,749 + +0.8 2,387,749 + +0.3 2,387,749 + +0.2 2,387,750 - -0.6 2,387,750 - -0.1 2,387,750 - -0.1 2,387,750 - -1.0 2,387,782 + -0.9 2,387,782 + +1.9 2,387,782 + +0.2 2,387,782 + -1.5 2,387,783 - +0.1 2,387,783 - -0.0 2,387,783 - -0.7 2,387,783 - +0.2 2,387,813 + -0.3 2,387,813 + +2.5 2,387,814 - -1.3 2,387,814 - +0.1 2,387,836 + +1.6 2,387,836 + -0.3 2,387,836 + +0.6 2,387,837 - -2.3 2,387,837 - -0.3 2,387,837 - +2.6 2,387,837 - -0.4 2,387,837 - -0.5 2,387,837 - +0.7 2,387,862 + +0.1 2,387,863 - -0.4 2,387,863 - +0.3 2,387,895 + -0.7 2,387,895 + -0.3 2,387,895 + -0.0 2,387,895 + -1.8 2,387,895 + -0.0 2,387,895 + -0.0 2,387,895 + +0.8 2,387,895 + +0.9 2,387,895 + +0.5 2,387,895 + +0.7 2,387,895 + -0.8 2,387,895 + -0.8 2,387,895 + -1.6 2,387,895 + +0.3 2,387,895 + +1.0 2,387,895 + -0.3 2,387,895 + -0.6 2,387,895 + +0.6 2,387,895 + +0.6 2,387,895 + +0.3 2,387,896 - +0.1 2,387,896 - -0.4 2,387,896 - -0.7 2,387,896 - +0.4 2,387,896 - +0.2 2,387,896 - -0.5 2,387,896 - -1.1 2,387,896 - -0.0 2,387,896 - -0.4 2,387,896 - -0.4 2,387,896 - +2.3 2,387,905 + -0.4 2,387,905 + +0.1 2,387,905 + -0.9 2,387,905 + -0.3 2,387,905 + +0.4 2,387,906 - +0.1 2,387,906 - -0.4 2,387,906 - +0.7 2,387,906 - -0.8 2,387,906 - -2.2 2,387,906 - -0.5 2,387,906 - -1.1 2,387,906 - -0.8 2,387,919 + +0.3 2,387,919 + -0.8 2,387,919 + +0.1 2,387,919 + +0.3 2,387,919 + -0.7 2,387,920 - -0.6 2,387,920 - -0.9 2,387,920 - +1.2 2,387,920 - -1.4 2,387,920 - +0.1 2,387,920 - -0.7 2,387,920 - +2.1 2,387,920 - -1.1 2,387,920 - -0.1 2,387,920 - -0.1 2,387,951 + -0.8 2,387,951 + -0.8 2,387,951 + -0.2 2,387,951 + +0.6 2,387,952 - -2.0 2,387,952 - -0.2 2,387,952 - -0.0 2,387,952 - -0.3 2,387,952 - +0.2 2,387,963 + -0.4 2,387,964 - +0.6 2,387,964 - -0.6 2,387,980 + +1.5 2,387,980 + -0.4 2,387,980 + -1.1 2,387,980 + -0.1 2,387,981 - +0.7 2,387,981 - +0.3 2,387,981 - +0.4 2,387,981 - +0.6 2,387,981 - +1.9 2,387,981 - +0.4 2,387,981 - -0.4 2,387,981 - -1.1 2,387,981 - -0.7 2,387,981 - +0.5 2,388,059 + -0.9 2,388,059 + +0.6 2,388,059 + +0.0 2,388,059 + -1.3 2,388,059 + +0.1 2,388,059 + +0.5 2,388,059 + -1.1 2,388,059 + -1.3 2,388,059 + +0.9 2,388,059 + -1.3 2,388,059 + +0.1 2,388,059 + -1.2 2,388,059 + +0.2 2,388,059 + -1.6 2,388,059 + -1.1 2,388,060 - -0.3 2,388,060 - -1.2 2,388,060 - +0.1 2,388,060 - +3.2 2,388,060 - -1.3 2,388,060 - -0.4 2,388,060 - +0.2 2,388,060 - -1.5 2,388,060 - -1.3 2,388,060 - +0.6 2,388,060 - -0.6 2,388,060 - +0.9 2,388,067 + +0.9 2,388,068 - -0.1 2,388,127 + -0.7 2,388,127 + -0.0 2,388,127 + +0.2 2,388,128 - -0.2 2,388,128 - +1.9 2,388,149 + +0.2 2,388,149 + -1.7 2,388,150 - -0.1
Or see this region's nucleotide sequence