Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10890 and AO353_10895 are separated by 208 nucleotides AO353_10895 and AO353_10900 are separated by 37 nucleotides AO353_10900 and AO353_10905 overlap by 8 nucleotides AO353_10905 and AO353_10910 overlap by 1 nucleotides
AO353_10890: AO353_10890 - methionine ABC transporter ATP-binding protein, at 2,378,510 to 2,379,517
_10890
AO353_10895: AO353_10895 - hypothetical protein, at 2,379,726 to 2,380,439
_10895
AO353_10900: AO353_10900 - hypothetical protein, at 2,380,477 to 2,381,265
_10900
AO353_10905: AO353_10905 - zinc ABC transporter ATP-binding protein, at 2,381,258 to 2,382,043
_10905
AO353_10910: AO353_10910 - Fur family transcriptional regulator, at 2,382,043 to 2,382,525
_10910
Position (kb)
2380
2381
2382 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2379.486 kb on + strand at 2379.487 kb on - strand at 2379.493 kb on + strand at 2379.519 kb on + strand at 2379.519 kb on + strand at 2379.520 kb on - strand at 2379.520 kb on - strand at 2379.576 kb on + strand at 2379.576 kb on + strand at 2379.576 kb on + strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.589 kb on + strand at 2379.589 kb on + strand at 2379.590 kb on - strand at 2379.590 kb on - strand at 2379.590 kb on - strand at 2379.599 kb on + strand at 2379.599 kb on + strand at 2379.599 kb on + strand at 2379.607 kb on - strand at 2379.635 kb on + strand at 2379.635 kb on + strand at 2379.636 kb on - strand at 2379.660 kb on + strand at 2379.661 kb on - strand at 2379.661 kb on - strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.727 kb on + strand at 2379.727 kb on + strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.853 kb on + strand, within AO353_10895 at 2379.854 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.222 kb on + strand, within AO353_10895 at 2380.222 kb on + strand, within AO353_10895 at 2380.222 kb on + strand, within AO353_10895 at 2380.223 kb on - strand, within AO353_10895 at 2380.223 kb on - strand, within AO353_10895 at 2380.390 kb on - strand at 2380.600 kb on + strand, within AO353_10900 at 2380.601 kb on - strand, within AO353_10900 at 2380.601 kb on - strand, within AO353_10900 at 2380.603 kb on - strand, within AO353_10900 at 2380.603 kb on - strand, within AO353_10900 at 2380.689 kb on + strand, within AO353_10900 at 2380.689 kb on + strand, within AO353_10900 at 2380.689 kb on + strand, within AO353_10900 at 2380.689 kb on + strand, within AO353_10900 at 2380.690 kb on - strand, within AO353_10900 at 2380.690 kb on - strand, within AO353_10900 at 2380.690 kb on - strand, within AO353_10900 at 2380.690 kb on - strand, within AO353_10900 at 2380.690 kb on - strand, within AO353_10900 at 2380.690 kb on - strand, within AO353_10900 at 2380.690 kb on - strand, within AO353_10900 at 2380.925 kb on + strand, within AO353_10900 at 2380.925 kb on + strand, within AO353_10900 at 2380.925 kb on + strand, within AO353_10900 at 2380.925 kb on + strand, within AO353_10900 at 2380.925 kb on + strand, within AO353_10900 at 2380.925 kb on + strand, within AO353_10900 at 2380.926 kb on - strand, within AO353_10900 at 2380.926 kb on - strand, within AO353_10900 at 2380.926 kb on - strand, within AO353_10900 at 2380.926 kb on - strand, within AO353_10900 at 2380.926 kb on - strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.963 kb on + strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.964 kb on - strand, within AO353_10900 at 2380.966 kb on + strand, within AO353_10900 at 2380.966 kb on + strand, within AO353_10900 at 2380.967 kb on - strand, within AO353_10900 at 2380.967 kb on - strand, within AO353_10900 at 2380.967 kb on - strand, within AO353_10900 at 2380.967 kb on - strand, within AO353_10900 at 2381.168 kb on + strand, within AO353_10900 at 2381.168 kb on + strand, within AO353_10900 at 2381.246 kb on + strand at 2381.246 kb on + strand at 2381.246 kb on + strand at 2381.246 kb on + strand at 2381.246 kb on + strand at 2381.246 kb on + strand at 2381.247 kb on - strand at 2381.247 kb on - strand at 2381.247 kb on - strand at 2381.247 kb on - strand at 2381.247 kb on - strand at 2381.361 kb on + strand, within AO353_10905 at 2381.361 kb on + strand, within AO353_10905 at 2381.361 kb on + strand, within AO353_10905 at 2381.362 kb on - strand, within AO353_10905 at 2381.362 kb on - strand, within AO353_10905 at 2381.362 kb on - strand, within AO353_10905 at 2381.362 kb on - strand, within AO353_10905 at 2381.560 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.562 kb on + strand, within AO353_10905 at 2381.563 kb on - strand, within AO353_10905 at 2381.563 kb on - strand, within AO353_10905 at 2381.563 kb on - strand, within AO353_10905 at 2381.563 kb on - strand, within AO353_10905 at 2381.651 kb on + strand, within AO353_10905 at 2381.654 kb on + strand, within AO353_10905 at 2381.654 kb on + strand, within AO353_10905 at 2381.654 kb on + strand, within AO353_10905 at 2381.654 kb on + strand, within AO353_10905 at 2381.654 kb on + strand, within AO353_10905 at 2381.654 kb on + strand, within AO353_10905 at 2381.655 kb on - strand, within AO353_10905 at 2381.655 kb on - strand, within AO353_10905 at 2381.655 kb on - strand, within AO353_10905 at 2381.655 kb on - strand, within AO353_10905 at 2381.753 kb on + strand, within AO353_10905 at 2381.753 kb on + strand, within AO353_10905 at 2381.753 kb on + strand, within AO353_10905 at 2381.753 kb on + strand, within AO353_10905 at 2381.753 kb on + strand, within AO353_10905 at 2381.754 kb on - strand, within AO353_10905 at 2381.754 kb on - strand, within AO353_10905 at 2381.754 kb on - strand, within AO353_10905 at 2381.827 kb on + strand, within AO353_10905 at 2381.827 kb on + strand, within AO353_10905 at 2381.827 kb on + strand, within AO353_10905 at 2381.827 kb on + strand, within AO353_10905 at 2381.827 kb on + strand, within AO353_10905 at 2381.827 kb on + strand, within AO353_10905 at 2381.828 kb on - strand, within AO353_10905 at 2381.828 kb on - strand, within AO353_10905 at 2381.828 kb on - strand, within AO353_10905 at 2381.829 kb on + strand, within AO353_10905 at 2381.829 kb on + strand, within AO353_10905 at 2381.829 kb on + strand, within AO353_10905 at 2381.829 kb on + strand, within AO353_10905 at 2381.830 kb on - strand, within AO353_10905 at 2381.830 kb on - strand, within AO353_10905 at 2381.830 kb on - strand, within AO353_10905 at 2381.830 kb on - strand, within AO353_10905 at 2381.830 kb on - strand, within AO353_10905 at 2381.984 kb on + strand at 2382.029 kb on + strand at 2382.029 kb on + strand at 2382.029 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 2,379,486 + +0.6 2,379,487 - -1.1 2,379,493 + -0.1 2,379,519 + -0.1 2,379,519 + -0.3 2,379,520 - -0.3 2,379,520 - +0.1 2,379,576 + -0.7 2,379,576 + -0.4 2,379,576 + +0.7 2,379,577 - -0.6 2,379,577 - -0.9 2,379,577 - +0.9 2,379,577 - +0.3 2,379,577 - -1.6 2,379,577 - -0.7 2,379,589 + +0.6 2,379,589 + -0.2 2,379,590 - -0.5 2,379,590 - +1.9 2,379,590 - -0.0 2,379,599 + +0.8 2,379,599 + +1.3 2,379,599 + -1.1 2,379,607 - +1.2 2,379,635 + +1.2 2,379,635 + +0.1 2,379,636 - +0.6 2,379,660 + -1.2 2,379,661 - -0.5 2,379,661 - +0.3 2,379,694 + +0.5 2,379,694 + +1.9 2,379,694 + +1.1 2,379,694 + +0.4 2,379,694 + +0.5 2,379,694 + +0.5 2,379,694 + -0.8 2,379,694 + -0.2 2,379,694 + +0.2 2,379,694 + -0.0 2,379,694 + -0.1 2,379,694 + +1.1 2,379,695 - +0.1 2,379,695 - -0.5 2,379,695 - -0.2 2,379,695 - -0.3 2,379,695 - +0.8 2,379,695 - -0.4 2,379,727 + -0.9 2,379,727 + +0.3 2,379,728 - -0.1 2,379,728 - +0.3 2,379,728 - -1.7 2,379,728 - -2.2 2,379,728 - -1.7 2,379,853 + AO353_10895 0.18 +0.9 2,379,854 - AO353_10895 0.18 +0.9 2,379,896 - AO353_10895 0.24 +0.7 2,379,896 - AO353_10895 0.24 +0.7 2,379,896 - AO353_10895 0.24 -0.5 2,379,896 - AO353_10895 0.24 +0.1 2,380,198 + AO353_10895 0.66 +0.4 2,380,198 + AO353_10895 0.66 -0.5 2,380,198 + AO353_10895 0.66 +2.9 2,380,198 + AO353_10895 0.66 -0.3 2,380,198 + AO353_10895 0.66 +0.1 2,380,199 - AO353_10895 0.66 -0.7 2,380,199 - AO353_10895 0.66 -1.2 2,380,199 - AO353_10895 0.66 -0.4 2,380,199 - AO353_10895 0.66 -0.8 2,380,199 - AO353_10895 0.66 -0.6 2,380,199 - AO353_10895 0.66 +0.7 2,380,222 + AO353_10895 0.69 -1.2 2,380,222 + AO353_10895 0.69 -0.0 2,380,222 + AO353_10895 0.69 -0.2 2,380,223 - AO353_10895 0.70 -0.7 2,380,223 - AO353_10895 0.70 +1.1 2,380,390 - -0.3 2,380,600 + AO353_10900 0.16 +0.6 2,380,601 - AO353_10900 0.16 -1.6 2,380,601 - AO353_10900 0.16 -2.1 2,380,603 - AO353_10900 0.16 -0.7 2,380,603 - AO353_10900 0.16 -0.7 2,380,689 + AO353_10900 0.27 +0.2 2,380,689 + AO353_10900 0.27 -0.3 2,380,689 + AO353_10900 0.27 -1.2 2,380,689 + AO353_10900 0.27 -0.6 2,380,690 - AO353_10900 0.27 -0.7 2,380,690 - AO353_10900 0.27 +0.2 2,380,690 - AO353_10900 0.27 -0.1 2,380,690 - AO353_10900 0.27 -0.8 2,380,690 - AO353_10900 0.27 -1.7 2,380,690 - AO353_10900 0.27 -2.3 2,380,690 - AO353_10900 0.27 -1.4 2,380,925 + AO353_10900 0.57 -2.4 2,380,925 + AO353_10900 0.57 -1.8 2,380,925 + AO353_10900 0.57 -0.6 2,380,925 + AO353_10900 0.57 -0.9 2,380,925 + AO353_10900 0.57 -1.6 2,380,925 + AO353_10900 0.57 -1.0 2,380,926 - AO353_10900 0.57 -1.7 2,380,926 - AO353_10900 0.57 -0.7 2,380,926 - AO353_10900 0.57 -0.4 2,380,926 - AO353_10900 0.57 -3.0 2,380,926 - AO353_10900 0.57 -0.7 2,380,963 + AO353_10900 0.62 -1.9 2,380,963 + AO353_10900 0.62 -1.3 2,380,963 + AO353_10900 0.62 +0.6 2,380,963 + AO353_10900 0.62 +0.1 2,380,963 + AO353_10900 0.62 -0.7 2,380,963 + AO353_10900 0.62 -0.0 2,380,963 + AO353_10900 0.62 -1.1 2,380,963 + AO353_10900 0.62 -1.4 2,380,963 + AO353_10900 0.62 -0.9 2,380,963 + AO353_10900 0.62 -0.3 2,380,963 + AO353_10900 0.62 -0.5 2,380,963 + AO353_10900 0.62 -2.3 2,380,963 + AO353_10900 0.62 -2.0 2,380,963 + AO353_10900 0.62 +0.2 2,380,963 + AO353_10900 0.62 +0.9 2,380,963 + AO353_10900 0.62 -0.9 2,380,963 + AO353_10900 0.62 +0.1 2,380,963 + AO353_10900 0.62 -1.1 2,380,964 - AO353_10900 0.62 -1.3 2,380,964 - AO353_10900 0.62 -1.0 2,380,964 - AO353_10900 0.62 -1.4 2,380,964 - AO353_10900 0.62 -1.0 2,380,964 - AO353_10900 0.62 -1.6 2,380,964 - AO353_10900 0.62 -0.4 2,380,964 - AO353_10900 0.62 +0.5 2,380,964 - AO353_10900 0.62 -1.1 2,380,964 - AO353_10900 0.62 -0.7 2,380,964 - AO353_10900 0.62 -2.2 2,380,964 - AO353_10900 0.62 +1.1 2,380,964 - AO353_10900 0.62 -1.6 2,380,964 - AO353_10900 0.62 -0.1 2,380,964 - AO353_10900 0.62 -1.7 2,380,964 - AO353_10900 0.62 -2.5 2,380,964 - AO353_10900 0.62 -0.2 2,380,966 + AO353_10900 0.62 -1.3 2,380,966 + AO353_10900 0.62 -1.1 2,380,967 - AO353_10900 0.62 -1.9 2,380,967 - AO353_10900 0.62 -1.4 2,380,967 - AO353_10900 0.62 -0.1 2,380,967 - AO353_10900 0.62 -0.9 2,381,168 + AO353_10900 0.88 +0.3 2,381,168 + AO353_10900 0.88 -0.1 2,381,246 + -2.3 2,381,246 + -1.4 2,381,246 + -0.1 2,381,246 + -1.4 2,381,246 + +0.3 2,381,246 + -0.4 2,381,247 - -2.0 2,381,247 - -0.6 2,381,247 - -1.1 2,381,247 - -1.5 2,381,247 - -1.4 2,381,361 + AO353_10905 0.13 -1.4 2,381,361 + AO353_10905 0.13 -0.9 2,381,361 + AO353_10905 0.13 -0.8 2,381,362 - AO353_10905 0.13 +0.9 2,381,362 - AO353_10905 0.13 -1.3 2,381,362 - AO353_10905 0.13 -0.7 2,381,362 - AO353_10905 0.13 -0.1 2,381,560 + AO353_10905 0.38 -1.4 2,381,562 + AO353_10905 0.39 -1.2 2,381,562 + AO353_10905 0.39 -1.3 2,381,562 + AO353_10905 0.39 +0.2 2,381,562 + AO353_10905 0.39 -0.9 2,381,562 + AO353_10905 0.39 -2.5 2,381,562 + AO353_10905 0.39 -0.8 2,381,562 + AO353_10905 0.39 +0.3 2,381,562 + AO353_10905 0.39 -0.9 2,381,562 + AO353_10905 0.39 -0.7 2,381,562 + AO353_10905 0.39 -1.6 2,381,562 + AO353_10905 0.39 +1.9 2,381,562 + AO353_10905 0.39 -2.0 2,381,563 - AO353_10905 0.39 +0.3 2,381,563 - AO353_10905 0.39 -2.8 2,381,563 - AO353_10905 0.39 -2.6 2,381,563 - AO353_10905 0.39 +0.5 2,381,651 + AO353_10905 0.50 -2.5 2,381,654 + AO353_10905 0.50 -0.4 2,381,654 + AO353_10905 0.50 -0.9 2,381,654 + AO353_10905 0.50 -1.7 2,381,654 + AO353_10905 0.50 +0.1 2,381,654 + AO353_10905 0.50 -2.9 2,381,654 + AO353_10905 0.50 -1.1 2,381,655 - AO353_10905 0.51 -1.5 2,381,655 - AO353_10905 0.51 +1.9 2,381,655 - AO353_10905 0.51 -1.1 2,381,655 - AO353_10905 0.51 -1.5 2,381,753 + AO353_10905 0.63 -0.3 2,381,753 + AO353_10905 0.63 -1.2 2,381,753 + AO353_10905 0.63 -1.7 2,381,753 + AO353_10905 0.63 -2.5 2,381,753 + AO353_10905 0.63 -1.3 2,381,754 - AO353_10905 0.63 -1.1 2,381,754 - AO353_10905 0.63 -0.7 2,381,754 - AO353_10905 0.63 +0.9 2,381,827 + AO353_10905 0.72 -1.1 2,381,827 + AO353_10905 0.72 -1.5 2,381,827 + AO353_10905 0.72 -1.1 2,381,827 + AO353_10905 0.72 -1.8 2,381,827 + AO353_10905 0.72 -1.2 2,381,827 + AO353_10905 0.72 -1.0 2,381,828 - AO353_10905 0.73 -2.5 2,381,828 - AO353_10905 0.73 -1.0 2,381,828 - AO353_10905 0.73 -0.2 2,381,829 + AO353_10905 0.73 -1.2 2,381,829 + AO353_10905 0.73 -2.1 2,381,829 + AO353_10905 0.73 -1.6 2,381,829 + AO353_10905 0.73 +0.3 2,381,830 - AO353_10905 0.73 -0.2 2,381,830 - AO353_10905 0.73 +0.3 2,381,830 - AO353_10905 0.73 -1.1 2,381,830 - AO353_10905 0.73 +0.3 2,381,830 - AO353_10905 0.73 -0.1 2,381,984 + -0.4 2,382,029 + -0.2 2,382,029 + -1.6 2,382,029 + -1.8
Or see this region's nucleotide sequence