Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10565 and AO353_10570 are separated by 180 nucleotides AO353_10570 and AO353_10575 are separated by 438 nucleotides
AO353_10565: AO353_10565 - transcriptional regulator, at 2,317,098 to 2,317,820
_10565
AO353_10570: AO353_10570 - hypothetical protein, at 2,318,001 to 2,318,291
_10570
AO353_10575: AO353_10575 - hypothetical protein, at 2,318,730 to 2,319,722
_10575
Position (kb)
2318
2319 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2317.019 kb on + strand at 2317.019 kb on + strand at 2317.020 kb on - strand at 2317.077 kb on + strand at 2317.077 kb on + strand at 2317.077 kb on + strand at 2317.077 kb on + strand at 2317.078 kb on - strand at 2317.078 kb on - strand at 2317.078 kb on - strand at 2317.117 kb on - strand at 2317.117 kb on - strand at 2317.147 kb on + strand at 2317.147 kb on + strand at 2317.147 kb on + strand at 2317.147 kb on + strand at 2317.148 kb on - strand at 2317.148 kb on - strand at 2317.207 kb on + strand, within AO353_10565 at 2317.207 kb on + strand, within AO353_10565 at 2317.208 kb on - strand, within AO353_10565 at 2317.208 kb on - strand, within AO353_10565 at 2317.208 kb on - strand, within AO353_10565 at 2317.217 kb on + strand, within AO353_10565 at 2317.267 kb on + strand, within AO353_10565 at 2317.267 kb on + strand, within AO353_10565 at 2317.268 kb on - strand, within AO353_10565 at 2317.268 kb on - strand, within AO353_10565 at 2317.268 kb on - strand, within AO353_10565 at 2317.273 kb on + strand, within AO353_10565 at 2317.273 kb on + strand, within AO353_10565 at 2317.273 kb on + strand, within AO353_10565 at 2317.274 kb on - strand, within AO353_10565 at 2317.274 kb on - strand, within AO353_10565 at 2317.274 kb on - strand, within AO353_10565 at 2317.274 kb on - strand, within AO353_10565 at 2317.274 kb on - strand, within AO353_10565 at 2317.274 kb on - strand, within AO353_10565 at 2317.327 kb on + strand, within AO353_10565 at 2317.507 kb on + strand, within AO353_10565 at 2317.507 kb on + strand, within AO353_10565 at 2317.507 kb on + strand, within AO353_10565 at 2317.507 kb on + strand, within AO353_10565 at 2317.507 kb on + strand, within AO353_10565 at 2317.508 kb on - strand, within AO353_10565 at 2317.508 kb on - strand, within AO353_10565 at 2317.508 kb on - strand, within AO353_10565 at 2317.508 kb on - strand, within AO353_10565 at 2317.508 kb on - strand, within AO353_10565 at 2317.508 kb on - strand, within AO353_10565 at 2317.508 kb on - strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.595 kb on + strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.596 kb on - strand, within AO353_10565 at 2317.624 kb on - strand, within AO353_10565 at 2317.656 kb on + strand, within AO353_10565 at 2317.657 kb on - strand, within AO353_10565 at 2317.692 kb on + strand, within AO353_10565 at 2317.692 kb on + strand, within AO353_10565 at 2317.692 kb on + strand, within AO353_10565 at 2317.692 kb on + strand, within AO353_10565 at 2317.693 kb on - strand, within AO353_10565 at 2317.783 kb on - strand at 2317.783 kb on - strand at 2317.806 kb on + strand at 2317.806 kb on + strand at 2317.806 kb on + strand at 2317.807 kb on - strand at 2317.807 kb on - strand at 2317.807 kb on - strand at 2317.842 kb on + strand at 2317.842 kb on + strand at 2317.842 kb on + strand at 2317.842 kb on + strand at 2317.843 kb on - strand at 2317.843 kb on - strand at 2317.843 kb on - strand at 2317.878 kb on + strand at 2317.878 kb on + strand at 2317.879 kb on - strand at 2317.972 kb on + strand at 2317.972 kb on + strand at 2317.972 kb on + strand at 2317.972 kb on + strand at 2317.972 kb on + strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2317.973 kb on - strand at 2318.024 kb on + strand at 2318.024 kb on + strand at 2318.025 kb on - strand at 2318.025 kb on - strand at 2318.025 kb on - strand at 2318.025 kb on - strand at 2318.091 kb on + strand, within AO353_10570 at 2318.091 kb on + strand, within AO353_10570 at 2318.091 kb on + strand, within AO353_10570 at 2318.091 kb on + strand, within AO353_10570 at 2318.091 kb on + strand, within AO353_10570 at 2318.091 kb on + strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.092 kb on - strand, within AO353_10570 at 2318.160 kb on + strand, within AO353_10570 at 2318.161 kb on - strand, within AO353_10570 at 2318.161 kb on - strand, within AO353_10570 at 2318.161 kb on - strand, within AO353_10570 at 2318.161 kb on - strand, within AO353_10570 at 2318.289 kb on + strand at 2318.289 kb on + strand at 2318.290 kb on - strand at 2318.290 kb on - strand at 2318.352 kb on + strand at 2318.353 kb on - strand at 2318.497 kb on + strand at 2318.498 kb on - strand at 2318.498 kb on - strand at 2318.512 kb on - strand at 2318.512 kb on - strand at 2318.572 kb on + strand at 2318.573 kb on - strand at 2318.573 kb on - strand at 2318.573 kb on - strand at 2318.596 kb on + strand at 2318.596 kb on + strand at 2318.596 kb on + strand at 2318.597 kb on - strand at 2318.597 kb on - strand at 2318.597 kb on - strand at 2318.597 kb on - strand at 2318.613 kb on - strand at 2318.618 kb on + strand at 2318.618 kb on + strand at 2318.618 kb on + strand at 2318.618 kb on + strand at 2318.618 kb on + strand at 2318.618 kb on + strand at 2318.618 kb on + strand at 2318.618 kb on + strand at 2318.619 kb on - strand at 2318.619 kb on - strand at 2318.619 kb on - strand at 2318.619 kb on - strand at 2318.619 kb on - strand at 2318.619 kb on - strand at 2318.619 kb on - strand at 2318.629 kb on + strand at 2318.630 kb on - strand at 2318.630 kb on - strand at 2318.630 kb on - strand at 2318.663 kb on - strand at 2318.695 kb on + strand at 2318.695 kb on + strand at 2318.696 kb on - strand at 2318.698 kb on + strand at 2318.698 kb on + strand at 2318.698 kb on + strand at 2318.698 kb on + strand at 2318.699 kb on - strand at 2318.699 kb on - strand at 2318.699 kb on - strand at 2318.699 kb on - strand at 2318.699 kb on - strand at 2318.770 kb on + strand at 2318.770 kb on + strand at 2318.844 kb on + strand, within AO353_10575 at 2318.844 kb on + strand, within AO353_10575 at 2318.844 kb on + strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2318.845 kb on - strand, within AO353_10575 at 2319.038 kb on + strand, within AO353_10575 at 2319.038 kb on + strand, within AO353_10575 at 2319.038 kb on + strand, within AO353_10575 at 2319.039 kb on - strand, within AO353_10575 at 2319.039 kb on - strand, within AO353_10575 at 2319.039 kb on - strand, within AO353_10575 at 2319.039 kb on - strand, within AO353_10575 at 2319.039 kb on - strand, within AO353_10575 at 2319.076 kb on + strand, within AO353_10575 at 2319.076 kb on + strand, within AO353_10575 at 2319.076 kb on + strand, within AO353_10575 at 2319.077 kb on - strand, within AO353_10575 at 2319.077 kb on - strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.132 kb on + strand, within AO353_10575 at 2319.133 kb on - strand, within AO353_10575 at 2319.133 kb on - strand, within AO353_10575 at 2319.133 kb on - strand, within AO353_10575 at 2319.133 kb on - strand, within AO353_10575 at 2319.133 kb on - strand, within AO353_10575 at 2319.156 kb on + strand, within AO353_10575 at 2319.156 kb on + strand, within AO353_10575 at 2319.156 kb on + strand at 2319.156 kb on + strand, within AO353_10575 at 2319.157 kb on - strand, within AO353_10575 at 2319.157 kb on - strand, within AO353_10575 at 2319.157 kb on - strand, within AO353_10575
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 2,317,019 + +0.9 2,317,019 + -1.4 2,317,020 - -0.7 2,317,077 + -0.3 2,317,077 + +1.2 2,317,077 + -0.1 2,317,077 + -2.0 2,317,078 - +0.5 2,317,078 - -0.1 2,317,078 - +0.0 2,317,117 - +0.7 2,317,117 - +1.2 2,317,147 + -0.1 2,317,147 + -0.9 2,317,147 + +0.9 2,317,147 + +0.2 2,317,148 - -0.4 2,317,148 - +0.5 2,317,207 + AO353_10565 0.15 -1.0 2,317,207 + AO353_10565 0.15 -0.5 2,317,208 - AO353_10565 0.15 -0.7 2,317,208 - AO353_10565 0.15 +0.1 2,317,208 - AO353_10565 0.15 +0.1 2,317,217 + AO353_10565 0.16 +1.1 2,317,267 + AO353_10565 0.23 -0.9 2,317,267 + AO353_10565 0.23 -1.3 2,317,268 - AO353_10565 0.24 -1.4 2,317,268 - AO353_10565 0.24 +0.0 2,317,268 - AO353_10565 0.24 -1.1 2,317,273 + AO353_10565 0.24 -0.8 2,317,273 + AO353_10565 0.24 +1.9 2,317,273 + AO353_10565 0.24 -2.0 2,317,274 - AO353_10565 0.24 +0.4 2,317,274 - AO353_10565 0.24 +0.7 2,317,274 - AO353_10565 0.24 +0.3 2,317,274 - AO353_10565 0.24 -0.4 2,317,274 - AO353_10565 0.24 +0.9 2,317,274 - AO353_10565 0.24 +0.2 2,317,327 + AO353_10565 0.32 +0.3 2,317,507 + AO353_10565 0.57 -0.2 2,317,507 + AO353_10565 0.57 +0.3 2,317,507 + AO353_10565 0.57 -0.2 2,317,507 + AO353_10565 0.57 +1.5 2,317,507 + AO353_10565 0.57 +0.9 2,317,508 - AO353_10565 0.57 +0.4 2,317,508 - AO353_10565 0.57 -0.2 2,317,508 - AO353_10565 0.57 +0.3 2,317,508 - AO353_10565 0.57 +0.9 2,317,508 - AO353_10565 0.57 -0.3 2,317,508 - AO353_10565 0.57 +1.1 2,317,508 - AO353_10565 0.57 -0.3 2,317,595 + AO353_10565 0.69 +0.1 2,317,595 + AO353_10565 0.69 +0.3 2,317,595 + AO353_10565 0.69 +0.2 2,317,595 + AO353_10565 0.69 -0.3 2,317,595 + AO353_10565 0.69 -0.3 2,317,595 + AO353_10565 0.69 +0.3 2,317,595 + AO353_10565 0.69 +0.8 2,317,595 + AO353_10565 0.69 -0.3 2,317,596 - AO353_10565 0.69 +0.3 2,317,596 - AO353_10565 0.69 -0.8 2,317,596 - AO353_10565 0.69 +0.1 2,317,596 - AO353_10565 0.69 +1.6 2,317,596 - AO353_10565 0.69 +0.1 2,317,596 - AO353_10565 0.69 -1.6 2,317,596 - AO353_10565 0.69 -0.7 2,317,596 - AO353_10565 0.69 +0.9 2,317,596 - AO353_10565 0.69 +1.2 2,317,596 - AO353_10565 0.69 -0.3 2,317,596 - AO353_10565 0.69 +0.3 2,317,596 - AO353_10565 0.69 +0.2 2,317,596 - AO353_10565 0.69 -0.3 2,317,596 - AO353_10565 0.69 +0.9 2,317,596 - AO353_10565 0.69 +1.5 2,317,596 - AO353_10565 0.69 +0.4 2,317,596 - AO353_10565 0.69 -0.9 2,317,596 - AO353_10565 0.69 -0.5 2,317,596 - AO353_10565 0.69 +1.2 2,317,596 - AO353_10565 0.69 +0.3 2,317,596 - AO353_10565 0.69 -0.6 2,317,624 - AO353_10565 0.73 -0.9 2,317,656 + AO353_10565 0.77 +0.9 2,317,657 - AO353_10565 0.77 +1.2 2,317,692 + AO353_10565 0.82 -0.1 2,317,692 + AO353_10565 0.82 -0.9 2,317,692 + AO353_10565 0.82 -0.2 2,317,692 + AO353_10565 0.82 +1.3 2,317,693 - AO353_10565 0.82 -0.3 2,317,783 - -0.1 2,317,783 - +0.9 2,317,806 + -1.7 2,317,806 + -1.1 2,317,806 + -0.4 2,317,807 - +0.0 2,317,807 - -0.4 2,317,807 - -2.2 2,317,842 + -1.0 2,317,842 + +0.2 2,317,842 + +0.1 2,317,842 + -0.1 2,317,843 - -1.1 2,317,843 - -0.0 2,317,843 - -0.3 2,317,878 + +0.8 2,317,878 + -1.3 2,317,879 - +0.3 2,317,972 + +0.1 2,317,972 + -0.3 2,317,972 + +0.5 2,317,972 + -0.5 2,317,972 + -0.2 2,317,973 - +0.3 2,317,973 - +0.1 2,317,973 - +0.5 2,317,973 - -0.9 2,317,973 - +1.6 2,317,973 - +0.3 2,317,973 - -0.3 2,317,973 - -0.3 2,317,973 - -1.3 2,318,024 + -1.7 2,318,024 + +0.1 2,318,025 - -1.3 2,318,025 - -0.7 2,318,025 - -0.1 2,318,025 - -0.5 2,318,091 + AO353_10570 0.31 -2.3 2,318,091 + AO353_10570 0.31 -2.0 2,318,091 + AO353_10570 0.31 +0.8 2,318,091 + AO353_10570 0.31 -0.3 2,318,091 + AO353_10570 0.31 +0.3 2,318,091 + AO353_10570 0.31 +0.2 2,318,092 - AO353_10570 0.31 -0.1 2,318,092 - AO353_10570 0.31 +0.2 2,318,092 - AO353_10570 0.31 +0.4 2,318,092 - AO353_10570 0.31 +1.5 2,318,092 - AO353_10570 0.31 +1.1 2,318,092 - AO353_10570 0.31 +0.5 2,318,092 - AO353_10570 0.31 +1.3 2,318,092 - AO353_10570 0.31 -0.7 2,318,092 - AO353_10570 0.31 +1.3 2,318,092 - AO353_10570 0.31 -0.0 2,318,092 - AO353_10570 0.31 +1.1 2,318,092 - AO353_10570 0.31 -0.2 2,318,160 + AO353_10570 0.55 +0.7 2,318,161 - AO353_10570 0.55 +0.3 2,318,161 - AO353_10570 0.55 +0.0 2,318,161 - AO353_10570 0.55 +0.5 2,318,161 - AO353_10570 0.55 +0.3 2,318,289 + -0.9 2,318,289 + -0.3 2,318,290 - -0.4 2,318,290 - +0.5 2,318,352 + +0.2 2,318,353 - +0.8 2,318,497 + -0.5 2,318,498 - +1.9 2,318,498 - +1.2 2,318,512 - -0.1 2,318,512 - +1.9 2,318,572 + +1.3 2,318,573 - +0.4 2,318,573 - -1.0 2,318,573 - +1.4 2,318,596 + +0.2 2,318,596 + +1.0 2,318,596 + +1.2 2,318,597 - -0.2 2,318,597 - -1.7 2,318,597 - -0.0 2,318,597 - +0.6 2,318,613 - -0.4 2,318,618 + +0.3 2,318,618 + -0.1 2,318,618 + -0.9 2,318,618 + +1.6 2,318,618 + +0.2 2,318,618 + -0.4 2,318,618 + -0.1 2,318,618 + -2.2 2,318,619 - +0.4 2,318,619 - +0.1 2,318,619 - -0.9 2,318,619 - -0.0 2,318,619 - +1.3 2,318,619 - -0.9 2,318,619 - -1.0 2,318,629 + -1.2 2,318,630 - +0.6 2,318,630 - +1.2 2,318,630 - -0.7 2,318,663 - -2.3 2,318,695 + -0.2 2,318,695 + -0.7 2,318,696 - -0.7 2,318,698 + -0.3 2,318,698 + -0.3 2,318,698 + -2.5 2,318,698 + +0.4 2,318,699 - -0.7 2,318,699 - +0.0 2,318,699 - -0.1 2,318,699 - -0.8 2,318,699 - +0.7 2,318,770 + -1.4 2,318,770 + -0.7 2,318,844 + AO353_10575 0.11 -0.3 2,318,844 + AO353_10575 0.11 +0.2 2,318,844 + AO353_10575 0.11 -0.6 2,318,845 - AO353_10575 0.12 +2.1 2,318,845 - AO353_10575 0.12 +0.7 2,318,845 - AO353_10575 0.12 -0.3 2,318,845 - AO353_10575 0.12 +0.2 2,318,845 - AO353_10575 0.12 -0.1 2,318,845 - AO353_10575 0.12 -0.1 2,318,845 - AO353_10575 0.12 +0.7 2,318,845 - AO353_10575 0.12 -0.9 2,318,845 - AO353_10575 0.12 +0.5 2,318,845 - AO353_10575 0.12 +0.3 2,319,038 + AO353_10575 0.31 +1.5 2,319,038 + AO353_10575 0.31 -0.0 2,319,038 + AO353_10575 0.31 +0.2 2,319,039 - AO353_10575 0.31 -0.1 2,319,039 - AO353_10575 0.31 -0.7 2,319,039 - AO353_10575 0.31 -0.1 2,319,039 - AO353_10575 0.31 -1.7 2,319,039 - AO353_10575 0.31 +0.4 2,319,076 + AO353_10575 0.35 -0.1 2,319,076 + AO353_10575 0.35 -1.9 2,319,076 + AO353_10575 0.35 -2.2 2,319,077 - AO353_10575 0.35 +0.1 2,319,077 - AO353_10575 0.35 +2.3 2,319,132 + AO353_10575 0.40 +0.7 2,319,132 + AO353_10575 0.40 -0.9 2,319,132 + AO353_10575 0.40 -0.5 2,319,132 + AO353_10575 0.40 -0.0 2,319,132 + AO353_10575 0.40 +1.1 2,319,132 + AO353_10575 0.40 -0.6 2,319,132 + AO353_10575 0.40 -0.3 2,319,132 + AO353_10575 0.40 +0.5 2,319,132 + AO353_10575 0.40 -0.9 2,319,133 - AO353_10575 0.41 -0.1 2,319,133 - AO353_10575 0.41 -0.5 2,319,133 - AO353_10575 0.41 -0.4 2,319,133 - AO353_10575 0.41 -0.7 2,319,133 - AO353_10575 0.41 -0.7 2,319,156 + AO353_10575 0.43 -2.9 2,319,156 + AO353_10575 0.43 -1.5 2,319,156 + +1.9 2,319,156 + AO353_10575 0.43 -0.2 2,319,157 - AO353_10575 0.43 +0.3 2,319,157 - AO353_10575 0.43 +1.5 2,319,157 - AO353_10575 0.43 -1.2
Or see this region's nucleotide sequence