Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10570

Experiment: L-Arginine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntAO353_10565 and AO353_10570 are separated by 180 nucleotidesAO353_10570 and AO353_10575 are separated by 438 nucleotides AO353_10565: AO353_10565 - transcriptional regulator, at 2,317,098 to 2,317,820 _10565 AO353_10570: AO353_10570 - hypothetical protein, at 2,318,001 to 2,318,291 _10570 AO353_10575: AO353_10575 - hypothetical protein, at 2,318,730 to 2,319,722 _10575 Position (kb) 2318 2319Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2317.019 kb on + strandat 2317.019 kb on + strandat 2317.020 kb on - strandat 2317.077 kb on + strandat 2317.077 kb on + strandat 2317.077 kb on + strandat 2317.077 kb on + strandat 2317.078 kb on - strandat 2317.078 kb on - strandat 2317.078 kb on - strandat 2317.117 kb on - strandat 2317.117 kb on - strandat 2317.147 kb on + strandat 2317.147 kb on + strandat 2317.147 kb on + strandat 2317.147 kb on + strandat 2317.148 kb on - strandat 2317.148 kb on - strandat 2317.207 kb on + strand, within AO353_10565at 2317.207 kb on + strand, within AO353_10565at 2317.208 kb on - strand, within AO353_10565at 2317.208 kb on - strand, within AO353_10565at 2317.208 kb on - strand, within AO353_10565at 2317.217 kb on + strand, within AO353_10565at 2317.267 kb on + strand, within AO353_10565at 2317.267 kb on + strand, within AO353_10565at 2317.268 kb on - strand, within AO353_10565at 2317.268 kb on - strand, within AO353_10565at 2317.268 kb on - strand, within AO353_10565at 2317.273 kb on + strand, within AO353_10565at 2317.273 kb on + strand, within AO353_10565at 2317.273 kb on + strand, within AO353_10565at 2317.274 kb on - strand, within AO353_10565at 2317.274 kb on - strand, within AO353_10565at 2317.274 kb on - strand, within AO353_10565at 2317.274 kb on - strand, within AO353_10565at 2317.274 kb on - strand, within AO353_10565at 2317.274 kb on - strand, within AO353_10565at 2317.327 kb on + strand, within AO353_10565at 2317.507 kb on + strand, within AO353_10565at 2317.507 kb on + strand, within AO353_10565at 2317.507 kb on + strand, within AO353_10565at 2317.507 kb on + strand, within AO353_10565at 2317.507 kb on + strand, within AO353_10565at 2317.508 kb on - strand, within AO353_10565at 2317.508 kb on - strand, within AO353_10565at 2317.508 kb on - strand, within AO353_10565at 2317.508 kb on - strand, within AO353_10565at 2317.508 kb on - strand, within AO353_10565at 2317.508 kb on - strand, within AO353_10565at 2317.508 kb on - strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.595 kb on + strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.596 kb on - strand, within AO353_10565at 2317.624 kb on - strand, within AO353_10565at 2317.656 kb on + strand, within AO353_10565at 2317.657 kb on - strand, within AO353_10565at 2317.692 kb on + strand, within AO353_10565at 2317.692 kb on + strand, within AO353_10565at 2317.692 kb on + strand, within AO353_10565at 2317.692 kb on + strand, within AO353_10565at 2317.693 kb on - strand, within AO353_10565at 2317.783 kb on - strandat 2317.783 kb on - strandat 2317.806 kb on + strandat 2317.806 kb on + strandat 2317.806 kb on + strandat 2317.807 kb on - strandat 2317.807 kb on - strandat 2317.807 kb on - strandat 2317.842 kb on + strandat 2317.842 kb on + strandat 2317.842 kb on + strandat 2317.842 kb on + strandat 2317.843 kb on - strandat 2317.843 kb on - strandat 2317.843 kb on - strandat 2317.878 kb on + strandat 2317.878 kb on + strandat 2317.879 kb on - strandat 2317.972 kb on + strandat 2317.972 kb on + strandat 2317.972 kb on + strandat 2317.972 kb on + strandat 2317.972 kb on + strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2317.973 kb on - strandat 2318.024 kb on + strandat 2318.024 kb on + strandat 2318.025 kb on - strandat 2318.025 kb on - strandat 2318.025 kb on - strandat 2318.025 kb on - strandat 2318.091 kb on + strand, within AO353_10570at 2318.091 kb on + strand, within AO353_10570at 2318.091 kb on + strand, within AO353_10570at 2318.091 kb on + strand, within AO353_10570at 2318.091 kb on + strand, within AO353_10570at 2318.091 kb on + strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.092 kb on - strand, within AO353_10570at 2318.160 kb on + strand, within AO353_10570at 2318.161 kb on - strand, within AO353_10570at 2318.161 kb on - strand, within AO353_10570at 2318.161 kb on - strand, within AO353_10570at 2318.161 kb on - strand, within AO353_10570at 2318.289 kb on + strandat 2318.289 kb on + strandat 2318.290 kb on - strandat 2318.290 kb on - strandat 2318.352 kb on + strandat 2318.353 kb on - strandat 2318.497 kb on + strandat 2318.498 kb on - strandat 2318.498 kb on - strandat 2318.512 kb on - strandat 2318.512 kb on - strandat 2318.572 kb on + strandat 2318.573 kb on - strandat 2318.573 kb on - strandat 2318.573 kb on - strandat 2318.596 kb on + strandat 2318.596 kb on + strandat 2318.596 kb on + strandat 2318.597 kb on - strandat 2318.597 kb on - strandat 2318.597 kb on - strandat 2318.597 kb on - strandat 2318.613 kb on - strandat 2318.618 kb on + strandat 2318.618 kb on + strandat 2318.618 kb on + strandat 2318.618 kb on + strandat 2318.618 kb on + strandat 2318.618 kb on + strandat 2318.618 kb on + strandat 2318.618 kb on + strandat 2318.619 kb on - strandat 2318.619 kb on - strandat 2318.619 kb on - strandat 2318.619 kb on - strandat 2318.619 kb on - strandat 2318.619 kb on - strandat 2318.619 kb on - strandat 2318.629 kb on + strandat 2318.630 kb on - strandat 2318.630 kb on - strandat 2318.630 kb on - strandat 2318.663 kb on - strandat 2318.695 kb on + strandat 2318.695 kb on + strandat 2318.696 kb on - strandat 2318.698 kb on + strandat 2318.698 kb on + strandat 2318.698 kb on + strandat 2318.698 kb on + strandat 2318.699 kb on - strandat 2318.699 kb on - strandat 2318.699 kb on - strandat 2318.699 kb on - strandat 2318.699 kb on - strandat 2318.770 kb on + strandat 2318.770 kb on + strandat 2318.844 kb on + strand, within AO353_10575at 2318.844 kb on + strand, within AO353_10575at 2318.844 kb on + strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2318.845 kb on - strand, within AO353_10575at 2319.038 kb on + strand, within AO353_10575at 2319.038 kb on + strand, within AO353_10575at 2319.038 kb on + strand, within AO353_10575at 2319.039 kb on - strand, within AO353_10575at 2319.039 kb on - strand, within AO353_10575at 2319.039 kb on - strand, within AO353_10575at 2319.039 kb on - strand, within AO353_10575at 2319.039 kb on - strand, within AO353_10575at 2319.076 kb on + strand, within AO353_10575at 2319.076 kb on + strand, within AO353_10575at 2319.076 kb on + strand, within AO353_10575at 2319.077 kb on - strand, within AO353_10575at 2319.077 kb on - strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.132 kb on + strand, within AO353_10575at 2319.133 kb on - strand, within AO353_10575at 2319.133 kb on - strand, within AO353_10575at 2319.133 kb on - strand, within AO353_10575at 2319.133 kb on - strand, within AO353_10575at 2319.133 kb on - strand, within AO353_10575at 2319.156 kb on + strand, within AO353_10575at 2319.156 kb on + strand, within AO353_10575at 2319.156 kb on + strandat 2319.156 kb on + strand, within AO353_10575at 2319.157 kb on - strand, within AO353_10575at 2319.157 kb on - strand, within AO353_10575at 2319.157 kb on - strand, within AO353_10575

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
remove
2,317,019 + +0.9
2,317,019 + -1.4
2,317,020 - -0.7
2,317,077 + -0.3
2,317,077 + +1.2
2,317,077 + -0.1
2,317,077 + -2.0
2,317,078 - +0.5
2,317,078 - -0.1
2,317,078 - +0.0
2,317,117 - +0.7
2,317,117 - +1.2
2,317,147 + -0.1
2,317,147 + -0.9
2,317,147 + +0.9
2,317,147 + +0.2
2,317,148 - -0.4
2,317,148 - +0.5
2,317,207 + AO353_10565 0.15 -1.0
2,317,207 + AO353_10565 0.15 -0.5
2,317,208 - AO353_10565 0.15 -0.7
2,317,208 - AO353_10565 0.15 +0.1
2,317,208 - AO353_10565 0.15 +0.1
2,317,217 + AO353_10565 0.16 +1.1
2,317,267 + AO353_10565 0.23 -0.9
2,317,267 + AO353_10565 0.23 -1.3
2,317,268 - AO353_10565 0.24 -1.4
2,317,268 - AO353_10565 0.24 +0.0
2,317,268 - AO353_10565 0.24 -1.1
2,317,273 + AO353_10565 0.24 -0.8
2,317,273 + AO353_10565 0.24 +1.9
2,317,273 + AO353_10565 0.24 -2.0
2,317,274 - AO353_10565 0.24 +0.4
2,317,274 - AO353_10565 0.24 +0.7
2,317,274 - AO353_10565 0.24 +0.3
2,317,274 - AO353_10565 0.24 -0.4
2,317,274 - AO353_10565 0.24 +0.9
2,317,274 - AO353_10565 0.24 +0.2
2,317,327 + AO353_10565 0.32 +0.3
2,317,507 + AO353_10565 0.57 -0.2
2,317,507 + AO353_10565 0.57 +0.3
2,317,507 + AO353_10565 0.57 -0.2
2,317,507 + AO353_10565 0.57 +1.5
2,317,507 + AO353_10565 0.57 +0.9
2,317,508 - AO353_10565 0.57 +0.4
2,317,508 - AO353_10565 0.57 -0.2
2,317,508 - AO353_10565 0.57 +0.3
2,317,508 - AO353_10565 0.57 +0.9
2,317,508 - AO353_10565 0.57 -0.3
2,317,508 - AO353_10565 0.57 +1.1
2,317,508 - AO353_10565 0.57 -0.3
2,317,595 + AO353_10565 0.69 +0.1
2,317,595 + AO353_10565 0.69 +0.3
2,317,595 + AO353_10565 0.69 +0.2
2,317,595 + AO353_10565 0.69 -0.3
2,317,595 + AO353_10565 0.69 -0.3
2,317,595 + AO353_10565 0.69 +0.3
2,317,595 + AO353_10565 0.69 +0.8
2,317,595 + AO353_10565 0.69 -0.3
2,317,596 - AO353_10565 0.69 +0.3
2,317,596 - AO353_10565 0.69 -0.8
2,317,596 - AO353_10565 0.69 +0.1
2,317,596 - AO353_10565 0.69 +1.6
2,317,596 - AO353_10565 0.69 +0.1
2,317,596 - AO353_10565 0.69 -1.6
2,317,596 - AO353_10565 0.69 -0.7
2,317,596 - AO353_10565 0.69 +0.9
2,317,596 - AO353_10565 0.69 +1.2
2,317,596 - AO353_10565 0.69 -0.3
2,317,596 - AO353_10565 0.69 +0.3
2,317,596 - AO353_10565 0.69 +0.2
2,317,596 - AO353_10565 0.69 -0.3
2,317,596 - AO353_10565 0.69 +0.9
2,317,596 - AO353_10565 0.69 +1.5
2,317,596 - AO353_10565 0.69 +0.4
2,317,596 - AO353_10565 0.69 -0.9
2,317,596 - AO353_10565 0.69 -0.5
2,317,596 - AO353_10565 0.69 +1.2
2,317,596 - AO353_10565 0.69 +0.3
2,317,596 - AO353_10565 0.69 -0.6
2,317,624 - AO353_10565 0.73 -0.9
2,317,656 + AO353_10565 0.77 +0.9
2,317,657 - AO353_10565 0.77 +1.2
2,317,692 + AO353_10565 0.82 -0.1
2,317,692 + AO353_10565 0.82 -0.9
2,317,692 + AO353_10565 0.82 -0.2
2,317,692 + AO353_10565 0.82 +1.3
2,317,693 - AO353_10565 0.82 -0.3
2,317,783 - -0.1
2,317,783 - +0.9
2,317,806 + -1.7
2,317,806 + -1.1
2,317,806 + -0.4
2,317,807 - +0.0
2,317,807 - -0.4
2,317,807 - -2.2
2,317,842 + -1.0
2,317,842 + +0.2
2,317,842 + +0.1
2,317,842 + -0.1
2,317,843 - -1.1
2,317,843 - -0.0
2,317,843 - -0.3
2,317,878 + +0.8
2,317,878 + -1.3
2,317,879 - +0.3
2,317,972 + +0.1
2,317,972 + -0.3
2,317,972 + +0.5
2,317,972 + -0.5
2,317,972 + -0.2
2,317,973 - +0.3
2,317,973 - +0.1
2,317,973 - +0.5
2,317,973 - -0.9
2,317,973 - +1.6
2,317,973 - +0.3
2,317,973 - -0.3
2,317,973 - -0.3
2,317,973 - -1.3
2,318,024 + -1.7
2,318,024 + +0.1
2,318,025 - -1.3
2,318,025 - -0.7
2,318,025 - -0.1
2,318,025 - -0.5
2,318,091 + AO353_10570 0.31 -2.3
2,318,091 + AO353_10570 0.31 -2.0
2,318,091 + AO353_10570 0.31 +0.8
2,318,091 + AO353_10570 0.31 -0.3
2,318,091 + AO353_10570 0.31 +0.3
2,318,091 + AO353_10570 0.31 +0.2
2,318,092 - AO353_10570 0.31 -0.1
2,318,092 - AO353_10570 0.31 +0.2
2,318,092 - AO353_10570 0.31 +0.4
2,318,092 - AO353_10570 0.31 +1.5
2,318,092 - AO353_10570 0.31 +1.1
2,318,092 - AO353_10570 0.31 +0.5
2,318,092 - AO353_10570 0.31 +1.3
2,318,092 - AO353_10570 0.31 -0.7
2,318,092 - AO353_10570 0.31 +1.3
2,318,092 - AO353_10570 0.31 -0.0
2,318,092 - AO353_10570 0.31 +1.1
2,318,092 - AO353_10570 0.31 -0.2
2,318,160 + AO353_10570 0.55 +0.7
2,318,161 - AO353_10570 0.55 +0.3
2,318,161 - AO353_10570 0.55 +0.0
2,318,161 - AO353_10570 0.55 +0.5
2,318,161 - AO353_10570 0.55 +0.3
2,318,289 + -0.9
2,318,289 + -0.3
2,318,290 - -0.4
2,318,290 - +0.5
2,318,352 + +0.2
2,318,353 - +0.8
2,318,497 + -0.5
2,318,498 - +1.9
2,318,498 - +1.2
2,318,512 - -0.1
2,318,512 - +1.9
2,318,572 + +1.3
2,318,573 - +0.4
2,318,573 - -1.0
2,318,573 - +1.4
2,318,596 + +0.2
2,318,596 + +1.0
2,318,596 + +1.2
2,318,597 - -0.2
2,318,597 - -1.7
2,318,597 - -0.0
2,318,597 - +0.6
2,318,613 - -0.4
2,318,618 + +0.3
2,318,618 + -0.1
2,318,618 + -0.9
2,318,618 + +1.6
2,318,618 + +0.2
2,318,618 + -0.4
2,318,618 + -0.1
2,318,618 + -2.2
2,318,619 - +0.4
2,318,619 - +0.1
2,318,619 - -0.9
2,318,619 - -0.0
2,318,619 - +1.3
2,318,619 - -0.9
2,318,619 - -1.0
2,318,629 + -1.2
2,318,630 - +0.6
2,318,630 - +1.2
2,318,630 - -0.7
2,318,663 - -2.3
2,318,695 + -0.2
2,318,695 + -0.7
2,318,696 - -0.7
2,318,698 + -0.3
2,318,698 + -0.3
2,318,698 + -2.5
2,318,698 + +0.4
2,318,699 - -0.7
2,318,699 - +0.0
2,318,699 - -0.1
2,318,699 - -0.8
2,318,699 - +0.7
2,318,770 + -1.4
2,318,770 + -0.7
2,318,844 + AO353_10575 0.11 -0.3
2,318,844 + AO353_10575 0.11 +0.2
2,318,844 + AO353_10575 0.11 -0.6
2,318,845 - AO353_10575 0.12 +2.1
2,318,845 - AO353_10575 0.12 +0.7
2,318,845 - AO353_10575 0.12 -0.3
2,318,845 - AO353_10575 0.12 +0.2
2,318,845 - AO353_10575 0.12 -0.1
2,318,845 - AO353_10575 0.12 -0.1
2,318,845 - AO353_10575 0.12 +0.7
2,318,845 - AO353_10575 0.12 -0.9
2,318,845 - AO353_10575 0.12 +0.5
2,318,845 - AO353_10575 0.12 +0.3
2,319,038 + AO353_10575 0.31 +1.5
2,319,038 + AO353_10575 0.31 -0.0
2,319,038 + AO353_10575 0.31 +0.2
2,319,039 - AO353_10575 0.31 -0.1
2,319,039 - AO353_10575 0.31 -0.7
2,319,039 - AO353_10575 0.31 -0.1
2,319,039 - AO353_10575 0.31 -1.7
2,319,039 - AO353_10575 0.31 +0.4
2,319,076 + AO353_10575 0.35 -0.1
2,319,076 + AO353_10575 0.35 -1.9
2,319,076 + AO353_10575 0.35 -2.2
2,319,077 - AO353_10575 0.35 +0.1
2,319,077 - AO353_10575 0.35 +2.3
2,319,132 + AO353_10575 0.40 +0.7
2,319,132 + AO353_10575 0.40 -0.9
2,319,132 + AO353_10575 0.40 -0.5
2,319,132 + AO353_10575 0.40 -0.0
2,319,132 + AO353_10575 0.40 +1.1
2,319,132 + AO353_10575 0.40 -0.6
2,319,132 + AO353_10575 0.40 -0.3
2,319,132 + AO353_10575 0.40 +0.5
2,319,132 + AO353_10575 0.40 -0.9
2,319,133 - AO353_10575 0.41 -0.1
2,319,133 - AO353_10575 0.41 -0.5
2,319,133 - AO353_10575 0.41 -0.4
2,319,133 - AO353_10575 0.41 -0.7
2,319,133 - AO353_10575 0.41 -0.7
2,319,156 + AO353_10575 0.43 -2.9
2,319,156 + AO353_10575 0.43 -1.5
2,319,156 + +1.9
2,319,156 + AO353_10575 0.43 -0.2
2,319,157 - AO353_10575 0.43 +0.3
2,319,157 - AO353_10575 0.43 +1.5
2,319,157 - AO353_10575 0.43 -1.2

Or see this region's nucleotide sequence