Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08055 and AO353_08060 are separated by 29 nucleotides AO353_08060 and AO353_08065 are separated by 27 nucleotides
AO353_08055: AO353_08055 - ABC transporter, at 1,776,110 to 1,777,012
_08055
AO353_08060: AO353_08060 - hypothetical protein, at 1,777,042 to 1,777,392
_08060
AO353_08065: AO353_08065 - amino acid dehydrogenase, at 1,777,420 to 1,778,661
_08065
Position (kb)
1777
1778 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1776.128 kb on + strand at 1776.128 kb on + strand at 1776.128 kb on + strand at 1776.190 kb on + strand at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.222 kb on + strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.223 kb on - strand, within AO353_08055 at 1776.249 kb on + strand, within AO353_08055 at 1776.249 kb on + strand, within AO353_08055 at 1776.249 kb on + strand, within AO353_08055 at 1776.249 kb on + strand, within AO353_08055 at 1776.250 kb on - strand, within AO353_08055 at 1776.318 kb on + strand, within AO353_08055 at 1776.319 kb on - strand, within AO353_08055 at 1776.319 kb on - strand, within AO353_08055 at 1776.319 kb on - strand, within AO353_08055 at 1776.347 kb on + strand, within AO353_08055 at 1776.347 kb on + strand, within AO353_08055 at 1776.347 kb on + strand, within AO353_08055 at 1776.347 kb on + strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.348 kb on - strand, within AO353_08055 at 1776.390 kb on + strand, within AO353_08055 at 1776.390 kb on + strand, within AO353_08055 at 1776.391 kb on - strand, within AO353_08055 at 1776.411 kb on + strand, within AO353_08055 at 1776.411 kb on + strand, within AO353_08055 at 1776.412 kb on - strand, within AO353_08055 at 1776.412 kb on - strand, within AO353_08055 at 1776.412 kb on - strand, within AO353_08055 at 1776.412 kb on - strand, within AO353_08055 at 1776.508 kb on - strand, within AO353_08055 at 1776.608 kb on + strand, within AO353_08055 at 1776.608 kb on + strand, within AO353_08055 at 1776.624 kb on + strand, within AO353_08055 at 1776.624 kb on + strand, within AO353_08055 at 1776.624 kb on + strand, within AO353_08055 at 1776.624 kb on + strand, within AO353_08055 at 1776.624 kb on + strand, within AO353_08055 at 1776.625 kb on - strand, within AO353_08055 at 1776.628 kb on + strand, within AO353_08055 at 1776.628 kb on + strand, within AO353_08055 at 1776.628 kb on + strand, within AO353_08055 at 1776.628 kb on + strand, within AO353_08055 at 1776.628 kb on + strand, within AO353_08055 at 1776.629 kb on - strand, within AO353_08055 at 1776.629 kb on - strand, within AO353_08055 at 1776.636 kb on + strand, within AO353_08055 at 1776.636 kb on + strand, within AO353_08055 at 1776.680 kb on - strand, within AO353_08055 at 1776.698 kb on + strand, within AO353_08055 at 1776.698 kb on + strand, within AO353_08055 at 1776.698 kb on + strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.699 kb on - strand, within AO353_08055 at 1776.750 kb on + strand, within AO353_08055 at 1776.750 kb on + strand, within AO353_08055 at 1776.750 kb on + strand, within AO353_08055 at 1776.750 kb on + strand, within AO353_08055 at 1776.750 kb on + strand, within AO353_08055 at 1776.750 kb on + strand, within AO353_08055 at 1776.750 kb on + strand, within AO353_08055 at 1776.751 kb on - strand, within AO353_08055 at 1776.751 kb on - strand, within AO353_08055 at 1776.751 kb on - strand, within AO353_08055 at 1776.751 kb on - strand, within AO353_08055 at 1776.751 kb on - strand, within AO353_08055 at 1776.751 kb on - strand, within AO353_08055 at 1776.790 kb on + strand, within AO353_08055 at 1776.790 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on + strand, within AO353_08055 at 1776.858 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1776.859 kb on - strand, within AO353_08055 at 1777.016 kb on + strand at 1777.016 kb on + strand at 1777.016 kb on + strand at 1777.016 kb on + strand at 1777.016 kb on + strand at 1777.016 kb on + strand at 1777.016 kb on + strand at 1777.017 kb on - strand at 1777.017 kb on - strand at 1777.017 kb on - strand at 1777.017 kb on - strand at 1777.039 kb on + strand at 1777.039 kb on + strand at 1777.039 kb on + strand at 1777.039 kb on + strand at 1777.039 kb on + strand at 1777.039 kb on + strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.040 kb on - strand at 1777.060 kb on - strand at 1777.196 kb on + strand, within AO353_08060 at 1777.196 kb on + strand, within AO353_08060 at 1777.196 kb on + strand, within AO353_08060 at 1777.196 kb on + strand, within AO353_08060 at 1777.197 kb on - strand, within AO353_08060 at 1777.197 kb on - strand, within AO353_08060 at 1777.357 kb on + strand, within AO353_08060 at 1777.377 kb on + strand at 1777.378 kb on - strand at 1777.378 kb on - strand at 1777.378 kb on - strand at 1777.437 kb on + strand at 1777.437 kb on + strand at 1777.437 kb on + strand at 1777.438 kb on - strand at 1777.438 kb on - strand at 1777.560 kb on - strand, within AO353_08065 at 1777.560 kb on - strand, within AO353_08065 at 1777.608 kb on + strand, within AO353_08065 at 1777.608 kb on + strand, within AO353_08065 at 1777.609 kb on - strand, within AO353_08065 at 1777.609 kb on - strand, within AO353_08065 at 1777.609 kb on - strand, within AO353_08065 at 1777.634 kb on + strand, within AO353_08065 at 1777.634 kb on + strand, within AO353_08065 at 1777.634 kb on + strand, within AO353_08065 at 1777.634 kb on + strand, within AO353_08065 at 1777.634 kb on + strand, within AO353_08065 at 1777.634 kb on + strand, within AO353_08065 at 1777.635 kb on - strand, within AO353_08065 at 1777.635 kb on - strand, within AO353_08065 at 1777.635 kb on - strand, within AO353_08065 at 1777.635 kb on - strand, within AO353_08065 at 1777.635 kb on - strand, within AO353_08065 at 1777.635 kb on - strand, within AO353_08065 at 1777.635 kb on - strand, within AO353_08065 at 1777.766 kb on + strand, within AO353_08065 at 1777.766 kb on + strand, within AO353_08065 at 1777.767 kb on - strand, within AO353_08065 at 1777.767 kb on - strand, within AO353_08065 at 1777.784 kb on + strand, within AO353_08065 at 1777.842 kb on + strand, within AO353_08065 at 1777.842 kb on + strand, within AO353_08065 at 1777.842 kb on + strand, within AO353_08065 at 1777.842 kb on + strand, within AO353_08065 at 1777.842 kb on + strand, within AO353_08065 at 1777.843 kb on - strand, within AO353_08065 at 1777.843 kb on - strand, within AO353_08065 at 1777.843 kb on - strand, within AO353_08065 at 1777.843 kb on - strand, within AO353_08065 at 1777.843 kb on - strand, within AO353_08065 at 1777.843 kb on - strand, within AO353_08065 at 1777.844 kb on + strand, within AO353_08065 at 1777.860 kb on - strand, within AO353_08065 at 1777.967 kb on - strand, within AO353_08065 at 1778.023 kb on + strand, within AO353_08065 at 1778.024 kb on - strand, within AO353_08065 at 1778.098 kb on - strand, within AO353_08065 at 1778.099 kb on + strand, within AO353_08065 at 1778.099 kb on + strand, within AO353_08065 at 1778.099 kb on + strand, within AO353_08065 at 1778.099 kb on + strand, within AO353_08065 at 1778.099 kb on + strand, within AO353_08065 at 1778.099 kb on + strand, within AO353_08065 at 1778.099 kb on + strand, within AO353_08065 at 1778.100 kb on - strand, within AO353_08065 at 1778.100 kb on - strand, within AO353_08065 at 1778.100 kb on - strand, within AO353_08065 at 1778.100 kb on - strand, within AO353_08065 at 1778.100 kb on - strand, within AO353_08065 at 1778.100 kb on - strand, within AO353_08065 at 1778.318 kb on - strand, within AO353_08065 at 1778.329 kb on + strand, within AO353_08065 at 1778.330 kb on - strand, within AO353_08065 at 1778.330 kb on - strand, within AO353_08065 at 1778.330 kb on - strand, within AO353_08065 at 1778.330 kb on - strand, within AO353_08065
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 1,776,128 + +0.8 1,776,128 + -1.4 1,776,128 + +0.8 1,776,190 + -0.3 1,776,222 + AO353_08055 0.12 -0.7 1,776,222 + AO353_08055 0.12 +0.2 1,776,222 + AO353_08055 0.12 +0.5 1,776,222 + AO353_08055 0.12 +3.8 1,776,222 + AO353_08055 0.12 +0.8 1,776,222 + AO353_08055 0.12 +0.2 1,776,222 + AO353_08055 0.12 -0.5 1,776,222 + AO353_08055 0.12 +1.2 1,776,222 + AO353_08055 0.12 +1.8 1,776,222 + AO353_08055 0.12 -0.1 1,776,223 - AO353_08055 0.13 +0.1 1,776,223 - AO353_08055 0.13 +0.8 1,776,223 - AO353_08055 0.13 +0.3 1,776,223 - AO353_08055 0.13 -1.5 1,776,223 - AO353_08055 0.13 +1.8 1,776,223 - AO353_08055 0.13 +0.5 1,776,223 - AO353_08055 0.13 -0.4 1,776,223 - AO353_08055 0.13 +1.0 1,776,223 - AO353_08055 0.13 -0.4 1,776,223 - AO353_08055 0.13 -0.8 1,776,249 + AO353_08055 0.15 -0.1 1,776,249 + AO353_08055 0.15 -1.5 1,776,249 + AO353_08055 0.15 +0.6 1,776,249 + AO353_08055 0.15 +0.5 1,776,250 - AO353_08055 0.16 +0.2 1,776,318 + AO353_08055 0.23 +0.2 1,776,319 - AO353_08055 0.23 -1.0 1,776,319 - AO353_08055 0.23 +1.5 1,776,319 - AO353_08055 0.23 +0.0 1,776,347 + AO353_08055 0.26 -0.2 1,776,347 + AO353_08055 0.26 -1.1 1,776,347 + AO353_08055 0.26 +2.8 1,776,347 + AO353_08055 0.26 -0.8 1,776,348 - AO353_08055 0.26 +0.9 1,776,348 - AO353_08055 0.26 -0.4 1,776,348 - AO353_08055 0.26 -0.1 1,776,348 - AO353_08055 0.26 -0.4 1,776,348 - AO353_08055 0.26 +0.4 1,776,348 - AO353_08055 0.26 -2.0 1,776,348 - AO353_08055 0.26 -0.2 1,776,348 - AO353_08055 0.26 +0.7 1,776,348 - AO353_08055 0.26 -1.2 1,776,390 + AO353_08055 0.31 -0.1 1,776,390 + AO353_08055 0.31 +0.5 1,776,391 - AO353_08055 0.31 +0.2 1,776,411 + AO353_08055 0.33 +0.2 1,776,411 + AO353_08055 0.33 +1.0 1,776,412 - AO353_08055 0.33 -0.2 1,776,412 - AO353_08055 0.33 +0.8 1,776,412 - AO353_08055 0.33 +0.5 1,776,412 - AO353_08055 0.33 +1.4 1,776,508 - AO353_08055 0.44 -0.1 1,776,608 + AO353_08055 0.55 +1.0 1,776,608 + AO353_08055 0.55 -0.2 1,776,624 + AO353_08055 0.57 -0.7 1,776,624 + AO353_08055 0.57 +0.8 1,776,624 + AO353_08055 0.57 -0.6 1,776,624 + AO353_08055 0.57 +0.2 1,776,624 + AO353_08055 0.57 +0.0 1,776,625 - AO353_08055 0.57 -0.2 1,776,628 + AO353_08055 0.57 -1.0 1,776,628 + AO353_08055 0.57 -0.5 1,776,628 + AO353_08055 0.57 -0.7 1,776,628 + AO353_08055 0.57 -0.2 1,776,628 + AO353_08055 0.57 -0.2 1,776,629 - AO353_08055 0.57 +1.1 1,776,629 - AO353_08055 0.57 -0.0 1,776,636 + AO353_08055 0.58 -0.4 1,776,636 + AO353_08055 0.58 +1.5 1,776,680 - AO353_08055 0.63 +1.0 1,776,698 + AO353_08055 0.65 -1.8 1,776,698 + AO353_08055 0.65 +1.2 1,776,698 + AO353_08055 0.65 +0.9 1,776,699 - AO353_08055 0.65 +1.4 1,776,699 - AO353_08055 0.65 -0.3 1,776,699 - AO353_08055 0.65 +0.2 1,776,699 - AO353_08055 0.65 +0.6 1,776,699 - AO353_08055 0.65 +0.6 1,776,699 - AO353_08055 0.65 +0.8 1,776,699 - AO353_08055 0.65 -0.1 1,776,699 - AO353_08055 0.65 +0.5 1,776,699 - AO353_08055 0.65 -0.7 1,776,699 - AO353_08055 0.65 +1.2 1,776,750 + AO353_08055 0.71 -1.9 1,776,750 + AO353_08055 0.71 -0.5 1,776,750 + AO353_08055 0.71 -0.4 1,776,750 + AO353_08055 0.71 -0.5 1,776,750 + AO353_08055 0.71 +0.3 1,776,750 + AO353_08055 0.71 -0.2 1,776,750 + AO353_08055 0.71 +0.5 1,776,751 - AO353_08055 0.71 -0.1 1,776,751 - AO353_08055 0.71 -0.7 1,776,751 - AO353_08055 0.71 -0.2 1,776,751 - AO353_08055 0.71 -0.5 1,776,751 - AO353_08055 0.71 +1.0 1,776,751 - AO353_08055 0.71 -0.1 1,776,790 + AO353_08055 0.75 -2.5 1,776,790 + AO353_08055 0.75 -0.3 1,776,858 + AO353_08055 0.83 +0.2 1,776,858 + AO353_08055 0.83 +0.2 1,776,858 + AO353_08055 0.83 -0.2 1,776,858 + AO353_08055 0.83 -0.7 1,776,858 + AO353_08055 0.83 -1.2 1,776,858 + AO353_08055 0.83 +0.2 1,776,858 + AO353_08055 0.83 +0.3 1,776,858 + AO353_08055 0.83 -0.7 1,776,858 + AO353_08055 0.83 -0.3 1,776,858 - AO353_08055 0.83 +0.5 1,776,859 - AO353_08055 0.83 +0.2 1,776,859 - AO353_08055 0.83 +0.3 1,776,859 - AO353_08055 0.83 +0.1 1,776,859 - AO353_08055 0.83 -0.2 1,776,859 - AO353_08055 0.83 +0.8 1,776,859 - AO353_08055 0.83 -0.3 1,776,859 - AO353_08055 0.83 -2.0 1,776,859 - AO353_08055 0.83 +1.2 1,776,859 - AO353_08055 0.83 +0.8 1,776,859 - AO353_08055 0.83 +0.2 1,776,859 - AO353_08055 0.83 -0.3 1,776,859 - AO353_08055 0.83 -1.7 1,776,859 - AO353_08055 0.83 +0.2 1,776,859 - AO353_08055 0.83 -0.2 1,777,016 + -1.5 1,777,016 + +0.1 1,777,016 + +0.3 1,777,016 + -1.0 1,777,016 + -1.2 1,777,016 + +0.2 1,777,016 + -2.3 1,777,017 - +1.0 1,777,017 - +1.4 1,777,017 - +0.6 1,777,017 - -1.2 1,777,039 + -1.1 1,777,039 + +0.0 1,777,039 + -0.7 1,777,039 + -0.2 1,777,039 + -0.5 1,777,039 + +0.8 1,777,040 - -0.2 1,777,040 - -0.8 1,777,040 - -0.5 1,777,040 - -1.0 1,777,040 - +1.0 1,777,040 - -0.9 1,777,040 - -0.2 1,777,040 - -0.9 1,777,040 - +0.5 1,777,060 - +0.6 1,777,196 + AO353_08060 0.44 -0.0 1,777,196 + AO353_08060 0.44 -0.0 1,777,196 + AO353_08060 0.44 +0.7 1,777,196 + AO353_08060 0.44 +1.8 1,777,197 - AO353_08060 0.44 +0.4 1,777,197 - AO353_08060 0.44 +0.0 1,777,357 + AO353_08060 0.90 +1.0 1,777,377 + -0.8 1,777,378 - -1.4 1,777,378 - -0.0 1,777,378 - -1.2 1,777,437 + +0.0 1,777,437 + +0.3 1,777,437 + +1.5 1,777,438 - +0.1 1,777,438 - -0.6 1,777,560 - AO353_08065 0.11 -1.8 1,777,560 - AO353_08065 0.11 -0.2 1,777,608 + AO353_08065 0.15 +0.4 1,777,608 + AO353_08065 0.15 -0.6 1,777,609 - AO353_08065 0.15 +1.2 1,777,609 - AO353_08065 0.15 +0.8 1,777,609 - AO353_08065 0.15 -1.4 1,777,634 + AO353_08065 0.17 +0.5 1,777,634 + AO353_08065 0.17 +0.6 1,777,634 + AO353_08065 0.17 -1.7 1,777,634 + AO353_08065 0.17 -0.8 1,777,634 + AO353_08065 0.17 -0.1 1,777,634 + AO353_08065 0.17 +0.2 1,777,635 - AO353_08065 0.17 +0.6 1,777,635 - AO353_08065 0.17 +0.1 1,777,635 - AO353_08065 0.17 -2.2 1,777,635 - AO353_08065 0.17 -0.2 1,777,635 - AO353_08065 0.17 -0.5 1,777,635 - AO353_08065 0.17 -0.5 1,777,635 - AO353_08065 0.17 -1.0 1,777,766 + AO353_08065 0.28 -0.8 1,777,766 + AO353_08065 0.28 +1.0 1,777,767 - AO353_08065 0.28 +0.2 1,777,767 - AO353_08065 0.28 -1.8 1,777,784 + AO353_08065 0.29 +0.3 1,777,842 + AO353_08065 0.34 -0.0 1,777,842 + AO353_08065 0.34 -0.6 1,777,842 + AO353_08065 0.34 -0.5 1,777,842 + AO353_08065 0.34 -1.8 1,777,842 + AO353_08065 0.34 +0.6 1,777,843 - AO353_08065 0.34 +0.8 1,777,843 - AO353_08065 0.34 -0.4 1,777,843 - AO353_08065 0.34 +0.2 1,777,843 - AO353_08065 0.34 +0.3 1,777,843 - AO353_08065 0.34 +0.0 1,777,843 - AO353_08065 0.34 +0.1 1,777,844 + AO353_08065 0.34 +0.6 1,777,860 - AO353_08065 0.35 +0.5 1,777,967 - AO353_08065 0.44 -0.2 1,778,023 + AO353_08065 0.49 -0.1 1,778,024 - AO353_08065 0.49 +1.3 1,778,098 - AO353_08065 0.55 -0.5 1,778,099 + AO353_08065 0.55 -0.5 1,778,099 + AO353_08065 0.55 +0.7 1,778,099 + AO353_08065 0.55 -0.4 1,778,099 + AO353_08065 0.55 +1.0 1,778,099 + AO353_08065 0.55 +0.2 1,778,099 + AO353_08065 0.55 -0.9 1,778,099 + AO353_08065 0.55 -0.3 1,778,100 - AO353_08065 0.55 -1.4 1,778,100 - AO353_08065 0.55 -1.5 1,778,100 - AO353_08065 0.55 +0.3 1,778,100 - AO353_08065 0.55 -0.5 1,778,100 - AO353_08065 0.55 -0.0 1,778,100 - AO353_08065 0.55 +0.5 1,778,318 - AO353_08065 0.72 -0.0 1,778,329 + AO353_08065 0.73 +0.7 1,778,330 - AO353_08065 0.73 +0.1 1,778,330 - AO353_08065 0.73 +1.3 1,778,330 - AO353_08065 0.73 -0.9 1,778,330 - AO353_08065 0.73 +0.2
Or see this region's nucleotide sequence