Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04650 and AO353_04655 are separated by 3 nucleotides AO353_04655 and AO353_04660 overlap by 4 nucleotides AO353_04660 and AO353_04665 are separated by 152 nucleotides AO353_04665 and AO353_04670 are separated by 349 nucleotides
AO353_04650: AO353_04650 - molybdenum cofactor biosynthesis protein MoaE, at 1,003,927 to 1,004,379
_04650
AO353_04655: AO353_04655 - molybdenum cofactor biosynthesis protein MoaD, at 1,004,383 to 1,004,625
_04655
AO353_04660: AO353_04660 - molybdenum cofactor biosynthesis protein MoaC, at 1,004,622 to 1,005,095
_04660
AO353_04665: AO353_04665 - ATPase, at 1,005,248 to 1,006,639
_04665
AO353_04670: AO353_04670 - polysaccharide deacetylase, at 1,006,989 to 1,008,113
_04670
Position (kb)
1005
1006
1007 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1004.276 kb on + strand, within AO353_04650 at 1004.277 kb on - strand, within AO353_04650 at 1004.464 kb on - strand, within AO353_04655 at 1004.725 kb on + strand, within AO353_04660 at 1004.725 kb on + strand, within AO353_04660 at 1004.725 kb on + strand, within AO353_04660 at 1004.725 kb on + strand, within AO353_04660 at 1004.725 kb on + strand, within AO353_04660 at 1004.725 kb on + strand, within AO353_04660 at 1004.726 kb on - strand, within AO353_04660 at 1004.726 kb on - strand, within AO353_04660 at 1004.726 kb on - strand, within AO353_04660 at 1004.996 kb on + strand, within AO353_04660 at 1004.996 kb on + strand, within AO353_04660 at 1004.996 kb on + strand, within AO353_04660 at 1004.996 kb on + strand, within AO353_04660 at 1004.997 kb on - strand, within AO353_04660 at 1004.997 kb on - strand, within AO353_04660 at 1004.997 kb on - strand, within AO353_04660 at 1004.997 kb on - strand, within AO353_04660 at 1005.059 kb on + strand at 1005.059 kb on + strand at 1005.060 kb on - strand at 1005.060 kb on - strand at 1005.060 kb on - strand at 1005.101 kb on + strand at 1005.101 kb on + strand at 1005.102 kb on - strand at 1005.102 kb on - strand at 1005.126 kb on + strand at 1005.126 kb on + strand at 1005.180 kb on + strand at 1005.180 kb on + strand at 1005.181 kb on - strand at 1005.203 kb on + strand at 1005.203 kb on + strand at 1005.249 kb on + strand at 1005.249 kb on + strand at 1005.249 kb on + strand at 1005.249 kb on + strand at 1005.249 kb on + strand at 1005.250 kb on - strand at 1005.250 kb on - strand at 1005.250 kb on - strand at 1005.250 kb on - strand at 1005.250 kb on - strand at 1005.250 kb on - strand at 1005.250 kb on - strand at 1005.268 kb on - strand at 1005.348 kb on + strand at 1005.348 kb on + strand at 1005.349 kb on - strand at 1005.349 kb on - strand at 1005.349 kb on - strand at 1005.349 kb on - strand at 1005.379 kb on - strand at 1005.379 kb on - strand at 1005.528 kb on + strand, within AO353_04665 at 1005.528 kb on + strand, within AO353_04665 at 1005.528 kb on + strand, within AO353_04665 at 1005.528 kb on + strand, within AO353_04665 at 1005.528 kb on + strand, within AO353_04665 at 1005.528 kb on + strand, within AO353_04665 at 1005.528 kb on + strand, within AO353_04665 at 1005.529 kb on + strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.529 kb on - strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.570 kb on + strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.571 kb on - strand, within AO353_04665 at 1005.589 kb on + strand, within AO353_04665 at 1005.589 kb on + strand, within AO353_04665 at 1005.589 kb on + strand, within AO353_04665 at 1005.589 kb on + strand, within AO353_04665 at 1005.589 kb on + strand, within AO353_04665 at 1005.589 kb on + strand, within AO353_04665 at 1005.590 kb on - strand, within AO353_04665 at 1005.590 kb on - strand, within AO353_04665 at 1005.846 kb on + strand, within AO353_04665 at 1005.846 kb on + strand, within AO353_04665 at 1005.846 kb on + strand, within AO353_04665 at 1005.846 kb on + strand, within AO353_04665 at 1005.847 kb on - strand, within AO353_04665 at 1005.847 kb on - strand, within AO353_04665 at 1005.847 kb on - strand, within AO353_04665 at 1005.864 kb on + strand, within AO353_04665 at 1005.864 kb on + strand, within AO353_04665 at 1005.864 kb on + strand, within AO353_04665 at 1005.864 kb on + strand, within AO353_04665 at 1005.864 kb on + strand, within AO353_04665 at 1005.864 kb on + strand, within AO353_04665 at 1005.865 kb on - strand, within AO353_04665 at 1005.865 kb on - strand, within AO353_04665 at 1005.865 kb on - strand, within AO353_04665 at 1005.865 kb on - strand, within AO353_04665 at 1005.865 kb on - strand, within AO353_04665 at 1006.003 kb on + strand, within AO353_04665 at 1006.003 kb on + strand, within AO353_04665 at 1006.003 kb on + strand, within AO353_04665 at 1006.003 kb on + strand, within AO353_04665 at 1006.004 kb on - strand, within AO353_04665 at 1006.004 kb on - strand, within AO353_04665 at 1006.004 kb on - strand, within AO353_04665 at 1006.164 kb on + strand, within AO353_04665 at 1006.164 kb on + strand, within AO353_04665 at 1006.164 kb on + strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.165 kb on - strand, within AO353_04665 at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.577 kb on + strand at 1006.578 kb on - strand at 1006.578 kb on - strand at 1006.578 kb on - strand at 1006.578 kb on - strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.592 kb on + strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.593 kb on - strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.596 kb on + strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.597 kb on - strand at 1006.621 kb on + strand at 1006.621 kb on + strand at 1006.622 kb on - strand at 1006.622 kb on - strand at 1006.622 kb on - strand at 1006.639 kb on + strand at 1006.640 kb on - strand at 1006.640 kb on - strand at 1006.674 kb on + strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.675 kb on - strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.813 kb on + strand at 1006.814 kb on - strand at 1006.814 kb on - strand at 1006.816 kb on + strand at 1006.816 kb on + strand at 1006.817 kb on - strand at 1006.817 kb on - strand at 1006.867 kb on - strand at 1006.914 kb on + strand at 1006.938 kb on + strand at 1006.938 kb on + strand at 1006.938 kb on + strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.939 kb on - strand at 1006.974 kb on - strand at 1007.333 kb on - strand, within AO353_04670 at 1007.333 kb on - strand, within AO353_04670 at 1007.333 kb on - strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.401 kb on + strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.402 kb on - strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.500 kb on + strand, within AO353_04670 at 1007.501 kb on - strand, within AO353_04670 at 1007.600 kb on - strand, within AO353_04670 at 1007.600 kb on - strand, within AO353_04670
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 1,004,276 + AO353_04650 0.77 +1.3 1,004,277 - AO353_04650 0.77 -0.8 1,004,464 - AO353_04655 0.33 +1.3 1,004,725 + AO353_04660 0.22 -0.9 1,004,725 + AO353_04660 0.22 -0.3 1,004,725 + AO353_04660 0.22 +0.9 1,004,725 + AO353_04660 0.22 +1.0 1,004,725 + AO353_04660 0.22 +0.1 1,004,725 + AO353_04660 0.22 -0.1 1,004,726 - AO353_04660 0.22 +0.8 1,004,726 - AO353_04660 0.22 -2.0 1,004,726 - AO353_04660 0.22 +0.5 1,004,996 + AO353_04660 0.79 -0.5 1,004,996 + AO353_04660 0.79 -0.3 1,004,996 + AO353_04660 0.79 +0.0 1,004,996 + AO353_04660 0.79 -0.4 1,004,997 - AO353_04660 0.79 -1.6 1,004,997 - AO353_04660 0.79 +0.5 1,004,997 - AO353_04660 0.79 -0.8 1,004,997 - AO353_04660 0.79 -0.3 1,005,059 + -0.5 1,005,059 + -0.8 1,005,060 - +0.5 1,005,060 - -0.8 1,005,060 - +0.3 1,005,101 + -0.0 1,005,101 + -0.1 1,005,102 - -0.3 1,005,102 - -0.3 1,005,126 + -0.6 1,005,126 + -1.0 1,005,180 + -1.0 1,005,180 + -0.7 1,005,181 - -0.9 1,005,203 + +1.5 1,005,203 + -0.8 1,005,249 + -0.5 1,005,249 + -0.0 1,005,249 + +0.2 1,005,249 + +0.3 1,005,249 + -0.5 1,005,250 - -1.3 1,005,250 - +0.1 1,005,250 - +0.5 1,005,250 - +0.6 1,005,250 - -2.6 1,005,250 - -0.1 1,005,250 - -0.8 1,005,268 - -0.5 1,005,348 + -0.8 1,005,348 + +0.5 1,005,349 - -2.0 1,005,349 - -1.8 1,005,349 - +0.1 1,005,349 - -1.6 1,005,379 - -0.6 1,005,379 - -2.7 1,005,528 + AO353_04665 0.20 -2.7 1,005,528 + AO353_04665 0.20 -0.8 1,005,528 + AO353_04665 0.20 +1.3 1,005,528 + AO353_04665 0.20 -0.5 1,005,528 + AO353_04665 0.20 -0.3 1,005,528 + AO353_04665 0.20 +1.0 1,005,528 + AO353_04665 0.20 -1.6 1,005,529 + AO353_04665 0.20 +0.4 1,005,529 - AO353_04665 0.20 -0.7 1,005,529 - AO353_04665 0.20 +1.0 1,005,529 - AO353_04665 0.20 -2.6 1,005,529 - AO353_04665 0.20 -1.0 1,005,529 - AO353_04665 0.20 -1.6 1,005,529 - AO353_04665 0.20 +0.2 1,005,529 - AO353_04665 0.20 -0.8 1,005,529 - AO353_04665 0.20 -1.2 1,005,529 - AO353_04665 0.20 -0.8 1,005,529 - AO353_04665 0.20 -1.8 1,005,529 - AO353_04665 0.20 +0.8 1,005,529 - AO353_04665 0.20 -2.5 1,005,570 + AO353_04665 0.23 -1.7 1,005,570 + AO353_04665 0.23 -2.3 1,005,570 + AO353_04665 0.23 -2.1 1,005,570 + AO353_04665 0.23 -0.8 1,005,570 + AO353_04665 0.23 +0.1 1,005,570 + AO353_04665 0.23 -1.8 1,005,570 + AO353_04665 0.23 +1.2 1,005,570 + AO353_04665 0.23 -0.2 1,005,570 + AO353_04665 0.23 +0.5 1,005,570 + AO353_04665 0.23 -0.8 1,005,570 + AO353_04665 0.23 +0.8 1,005,571 - AO353_04665 0.23 -2.4 1,005,571 - AO353_04665 0.23 +0.2 1,005,571 - AO353_04665 0.23 -0.6 1,005,571 - AO353_04665 0.23 -0.3 1,005,571 - AO353_04665 0.23 -0.3 1,005,571 - AO353_04665 0.23 -0.5 1,005,571 - AO353_04665 0.23 +0.2 1,005,571 - AO353_04665 0.23 +0.2 1,005,571 - AO353_04665 0.23 -0.0 1,005,571 - AO353_04665 0.23 +0.2 1,005,571 - AO353_04665 0.23 -0.9 1,005,589 + AO353_04665 0.24 -1.8 1,005,589 + AO353_04665 0.24 -2.0 1,005,589 + AO353_04665 0.24 -2.0 1,005,589 + AO353_04665 0.24 -0.2 1,005,589 + AO353_04665 0.24 -0.6 1,005,589 + AO353_04665 0.24 -1.4 1,005,590 - AO353_04665 0.25 -1.6 1,005,590 - AO353_04665 0.25 +0.5 1,005,846 + AO353_04665 0.43 -2.0 1,005,846 + AO353_04665 0.43 -0.3 1,005,846 + AO353_04665 0.43 -0.0 1,005,846 + AO353_04665 0.43 -1.0 1,005,847 - AO353_04665 0.43 -0.5 1,005,847 - AO353_04665 0.43 -0.0 1,005,847 - AO353_04665 0.43 -1.9 1,005,864 + AO353_04665 0.44 +0.1 1,005,864 + AO353_04665 0.44 -0.9 1,005,864 + AO353_04665 0.44 +0.3 1,005,864 + AO353_04665 0.44 -2.0 1,005,864 + AO353_04665 0.44 -0.5 1,005,864 + AO353_04665 0.44 -1.5 1,005,865 - AO353_04665 0.44 -1.8 1,005,865 - AO353_04665 0.44 -2.4 1,005,865 - AO353_04665 0.44 -1.3 1,005,865 - AO353_04665 0.44 -1.9 1,005,865 - AO353_04665 0.44 -0.3 1,006,003 + AO353_04665 0.54 -0.8 1,006,003 + AO353_04665 0.54 -2.4 1,006,003 + AO353_04665 0.54 +0.1 1,006,003 + AO353_04665 0.54 -1.0 1,006,004 - AO353_04665 0.54 -1.2 1,006,004 - AO353_04665 0.54 -2.4 1,006,004 - AO353_04665 0.54 -1.5 1,006,164 + AO353_04665 0.66 +0.2 1,006,164 + AO353_04665 0.66 -1.5 1,006,164 + AO353_04665 0.66 -1.4 1,006,165 - AO353_04665 0.66 +1.0 1,006,165 - AO353_04665 0.66 +0.2 1,006,165 - AO353_04665 0.66 -0.5 1,006,165 - AO353_04665 0.66 -0.5 1,006,165 - AO353_04665 0.66 -2.2 1,006,577 + -1.5 1,006,577 + -0.7 1,006,577 + -1.2 1,006,577 + -0.2 1,006,577 + +2.1 1,006,577 + -0.3 1,006,577 + -0.6 1,006,577 + -1.8 1,006,577 + -0.9 1,006,577 + -0.5 1,006,577 + -1.6 1,006,577 + -0.3 1,006,577 + -1.5 1,006,578 - -1.9 1,006,578 - -0.5 1,006,578 - -1.4 1,006,578 - -1.3 1,006,592 + +0.1 1,006,592 + -0.8 1,006,592 + -0.6 1,006,592 + -0.8 1,006,592 + -0.8 1,006,593 - -0.3 1,006,593 - -0.9 1,006,593 - -0.5 1,006,593 - -0.3 1,006,593 - -2.7 1,006,596 + -2.1 1,006,596 + +0.5 1,006,596 + -1.5 1,006,596 + -1.0 1,006,596 + -2.3 1,006,597 - -0.6 1,006,597 - -1.2 1,006,597 - -0.6 1,006,597 - -0.4 1,006,597 - +1.1 1,006,597 - -1.0 1,006,597 - +0.3 1,006,597 - -1.6 1,006,597 - -0.6 1,006,597 - +0.1 1,006,597 - -0.5 1,006,597 - -1.0 1,006,597 - +0.1 1,006,621 + +1.1 1,006,621 + -2.5 1,006,622 - -0.6 1,006,622 - -0.3 1,006,622 - -2.4 1,006,639 + -0.7 1,006,640 - -1.2 1,006,640 - -2.2 1,006,674 + -1.2 1,006,675 - -1.9 1,006,675 - -0.8 1,006,675 - +0.4 1,006,675 - +1.5 1,006,675 - -0.8 1,006,813 + -3.2 1,006,813 + -1.8 1,006,813 + -0.9 1,006,813 + -0.5 1,006,813 + -0.8 1,006,814 - -0.9 1,006,814 - +1.1 1,006,816 + +0.2 1,006,816 + -1.8 1,006,817 - -0.8 1,006,817 - -1.6 1,006,867 - -1.0 1,006,914 + -0.9 1,006,938 + +0.2 1,006,938 + -0.0 1,006,938 + +0.0 1,006,939 - -1.0 1,006,939 - -0.7 1,006,939 - -0.5 1,006,939 - -0.8 1,006,939 - +1.0 1,006,939 - -2.2 1,006,939 - -1.3 1,006,974 - -1.5 1,007,333 - AO353_04670 0.31 -0.5 1,007,333 - AO353_04670 0.31 -0.0 1,007,333 - AO353_04670 0.31 +1.1 1,007,401 + AO353_04670 0.37 +0.0 1,007,401 + AO353_04670 0.37 -0.1 1,007,401 + AO353_04670 0.37 +2.1 1,007,401 + AO353_04670 0.37 -1.1 1,007,402 - AO353_04670 0.37 -0.2 1,007,402 - AO353_04670 0.37 -0.8 1,007,402 - AO353_04670 0.37 +0.1 1,007,402 - AO353_04670 0.37 +0.4 1,007,500 + AO353_04670 0.45 +0.9 1,007,500 + AO353_04670 0.45 +0.5 1,007,500 + AO353_04670 0.45 +0.8 1,007,500 + AO353_04670 0.45 +0.3 1,007,501 - AO353_04670 0.46 -0.2 1,007,600 - AO353_04670 0.54 -0.9 1,007,600 - AO353_04670 0.54 -0.5
Or see this region's nucleotide sequence