Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04035 and AO353_04040 are separated by 66 nucleotides AO353_04040 and AO353_04045 are separated by 166 nucleotides AO353_04045 and AO353_04050 are separated by 188 nucleotides
AO353_04035: AO353_04035 - exclusion suppressor FxsA, at 868,176 to 868,652
_04035
AO353_04040: AO353_04040 - heme iron utilization protein, at 868,719 to 869,450
_04040
AO353_04045: AO353_04045 - 3-ketoacyl-ACP reductase, at 869,617 to 870,375
_04045
AO353_04050: AO353_04050 - ATP-binding protein, at 870,564 to 871,658
_04050
Position (kb) 869
870
871 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 868.687 kb on + strand at 868.687 kb on + strand at 868.687 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.694 kb on + strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.695 kb on - strand at 868.785 kb on + strand at 868.785 kb on + strand at 868.785 kb on + strand at 868.786 kb on - strand at 868.786 kb on - strand at 868.799 kb on + strand, within AO353_04040 at 868.800 kb on - strand, within AO353_04040 at 868.800 kb on - strand, within AO353_04040 at 868.802 kb on + strand, within AO353_04040 at 868.802 kb on + strand, within AO353_04040 at 868.802 kb on + strand, within AO353_04040 at 868.803 kb on - strand, within AO353_04040 at 868.803 kb on - strand, within AO353_04040 at 868.803 kb on - strand, within AO353_04040 at 868.803 kb on - strand, within AO353_04040 at 868.803 kb on - strand, within AO353_04040 at 868.921 kb on + strand, within AO353_04040 at 868.921 kb on + strand, within AO353_04040 at 868.921 kb on + strand, within AO353_04040 at 868.922 kb on - strand, within AO353_04040 at 868.922 kb on - strand, within AO353_04040 at 869.047 kb on + strand, within AO353_04040 at 869.047 kb on + strand, within AO353_04040 at 869.047 kb on + strand, within AO353_04040 at 869.047 kb on + strand, within AO353_04040 at 869.101 kb on + strand, within AO353_04040 at 869.101 kb on + strand, within AO353_04040 at 869.101 kb on + strand, within AO353_04040 at 869.101 kb on + strand, within AO353_04040 at 869.101 kb on + strand, within AO353_04040 at 869.102 kb on - strand, within AO353_04040 at 869.102 kb on - strand, within AO353_04040 at 869.122 kb on + strand, within AO353_04040 at 869.122 kb on + strand, within AO353_04040 at 869.123 kb on - strand, within AO353_04040 at 869.129 kb on - strand, within AO353_04040 at 869.131 kb on + strand, within AO353_04040 at 869.131 kb on + strand, within AO353_04040 at 869.132 kb on - strand, within AO353_04040 at 869.191 kb on + strand, within AO353_04040 at 869.192 kb on - strand, within AO353_04040 at 869.214 kb on + strand, within AO353_04040 at 869.214 kb on + strand, within AO353_04040 at 869.214 kb on + strand, within AO353_04040 at 869.215 kb on - strand, within AO353_04040 at 869.215 kb on - strand, within AO353_04040 at 869.453 kb on + strand at 869.453 kb on + strand at 869.463 kb on + strand at 869.463 kb on + strand at 869.463 kb on + strand at 869.463 kb on + strand at 869.463 kb on + strand at 869.463 kb on + strand at 869.464 kb on - strand at 869.464 kb on - strand at 869.464 kb on - strand at 869.465 kb on + strand at 869.466 kb on - strand at 869.466 kb on - strand at 869.467 kb on + strand at 869.467 kb on + strand at 869.467 kb on + strand at 869.467 kb on + strand at 869.467 kb on + strand at 869.467 kb on + strand at 869.468 kb on - strand at 869.468 kb on - strand at 869.468 kb on - strand at 869.468 kb on - strand at 869.577 kb on + strand at 869.577 kb on + strand at 869.577 kb on + strand at 869.577 kb on + strand at 869.578 kb on - strand at 869.636 kb on + strand at 869.636 kb on + strand at 869.644 kb on - strand at 869.687 kb on - strand at 869.742 kb on - strand, within AO353_04045 at 869.742 kb on - strand, within AO353_04045 at 869.791 kb on + strand, within AO353_04045 at 869.791 kb on + strand, within AO353_04045 at 869.792 kb on - strand, within AO353_04045 at 869.792 kb on - strand, within AO353_04045 at 869.792 kb on - strand, within AO353_04045 at 869.792 kb on - strand, within AO353_04045 at 869.792 kb on - strand, within AO353_04045 at 870.100 kb on + strand, within AO353_04045 at 870.100 kb on + strand, within AO353_04045 at 870.100 kb on + strand, within AO353_04045 at 870.100 kb on + strand, within AO353_04045 at 870.101 kb on - strand, within AO353_04045 at 870.101 kb on - strand, within AO353_04045 at 870.101 kb on - strand, within AO353_04045 at 870.101 kb on - strand, within AO353_04045 at 870.101 kb on - strand, within AO353_04045 at 870.101 kb on - strand, within AO353_04045 at 870.310 kb on + strand at 870.310 kb on + strand at 870.310 kb on + strand at 870.310 kb on + strand at 870.310 kb on + strand at 870.310 kb on + strand at 870.310 kb on + strand at 870.310 kb on + strand at 870.310 kb on + strand at 870.311 kb on - strand at 870.311 kb on - strand at 870.311 kb on - strand at 870.311 kb on - strand at 870.328 kb on + strand at 870.328 kb on + strand at 870.328 kb on + strand at 870.329 kb on - strand at 870.329 kb on - strand at 870.331 kb on + strand at 870.331 kb on + strand at 870.331 kb on + strand at 870.331 kb on + strand at 870.331 kb on + strand at 870.331 kb on + strand at 870.331 kb on + strand at 870.331 kb on + strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.332 kb on - strand at 870.373 kb on + strand at 870.374 kb on - strand at 870.450 kb on + strand at 870.450 kb on + strand at 870.470 kb on + strand at 870.470 kb on + strand at 870.470 kb on + strand at 870.493 kb on + strand at 870.557 kb on + strand at 870.557 kb on + strand at 870.558 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 868,687 + +0.0 868,687 + +1.5 868,687 + -0.1 868,694 + -0.5 868,694 + -1.0 868,694 + -1.1 868,694 + -1.5 868,694 + -0.1 868,694 + +0.2 868,694 + -0.3 868,694 + -0.6 868,694 + +0.5 868,694 + +1.0 868,694 + -0.5 868,695 - -0.7 868,695 - -1.0 868,695 - +0.5 868,695 - +0.3 868,695 - -0.5 868,695 - -0.1 868,695 - -0.1 868,695 - +1.2 868,695 - -1.9 868,785 + +1.5 868,785 + +0.7 868,785 + +0.1 868,786 - +0.5 868,786 - -0.7 868,799 + AO353_04040 0.11 +1.0 868,800 - AO353_04040 0.11 -1.0 868,800 - AO353_04040 0.11 -1.8 868,802 + AO353_04040 0.11 -0.2 868,802 + AO353_04040 0.11 -0.5 868,802 + AO353_04040 0.11 -0.1 868,803 - AO353_04040 0.11 +1.0 868,803 - AO353_04040 0.11 +1.9 868,803 - AO353_04040 0.11 +3.1 868,803 - AO353_04040 0.11 +0.4 868,803 - AO353_04040 0.11 +0.6 868,921 + AO353_04040 0.28 -0.8 868,921 + AO353_04040 0.28 +0.5 868,921 + AO353_04040 0.28 +0.1 868,922 - AO353_04040 0.28 +0.7 868,922 - AO353_04040 0.28 -0.1 869,047 + AO353_04040 0.45 +0.2 869,047 + AO353_04040 0.45 -0.8 869,047 + AO353_04040 0.45 +0.5 869,047 + AO353_04040 0.45 +2.0 869,101 + AO353_04040 0.52 -0.9 869,101 + AO353_04040 0.52 -0.4 869,101 + AO353_04040 0.52 +1.9 869,101 + AO353_04040 0.52 -0.5 869,101 + AO353_04040 0.52 -0.1 869,102 - AO353_04040 0.52 -0.5 869,102 - AO353_04040 0.52 -0.2 869,122 + AO353_04040 0.55 -0.5 869,122 + AO353_04040 0.55 +0.7 869,123 - AO353_04040 0.55 +0.7 869,129 - AO353_04040 0.56 +2.7 869,131 + AO353_04040 0.56 -0.1 869,131 + AO353_04040 0.56 +1.1 869,132 - AO353_04040 0.56 -0.4 869,191 + AO353_04040 0.64 -0.7 869,192 - AO353_04040 0.65 -0.2 869,214 + AO353_04040 0.68 +0.2 869,214 + AO353_04040 0.68 +0.8 869,214 + AO353_04040 0.68 -0.1 869,215 - AO353_04040 0.68 -0.7 869,215 - AO353_04040 0.68 +0.5 869,453 + -0.3 869,453 + +0.7 869,463 + -0.9 869,463 + +0.5 869,463 + +0.2 869,463 + -1.4 869,463 + +0.5 869,463 + -0.7 869,464 - -0.5 869,464 - -0.2 869,464 - +0.8 869,465 + -1.0 869,466 - +0.4 869,466 - -1.1 869,467 + -0.3 869,467 + +0.2 869,467 + -0.1 869,467 + -1.4 869,467 + -0.4 869,467 + -0.5 869,468 - -0.4 869,468 - +0.2 869,468 - -0.8 869,468 - -0.5 869,577 + -2.4 869,577 + -0.2 869,577 + -0.3 869,577 + -0.2 869,578 - -0.5 869,636 + -0.3 869,636 + -0.4 869,644 - -1.1 869,687 - -1.5 869,742 - AO353_04045 0.16 +0.3 869,742 - AO353_04045 0.16 -0.3 869,791 + AO353_04045 0.23 -0.1 869,791 + AO353_04045 0.23 +0.2 869,792 - AO353_04045 0.23 +0.7 869,792 - AO353_04045 0.23 +1.5 869,792 - AO353_04045 0.23 -1.0 869,792 - AO353_04045 0.23 +0.8 869,792 - AO353_04045 0.23 -0.1 870,100 + AO353_04045 0.64 +1.0 870,100 + AO353_04045 0.64 -0.5 870,100 + AO353_04045 0.64 +1.3 870,100 + AO353_04045 0.64 -0.2 870,101 - AO353_04045 0.64 +0.5 870,101 - AO353_04045 0.64 +0.7 870,101 - AO353_04045 0.64 +0.7 870,101 - AO353_04045 0.64 -0.7 870,101 - AO353_04045 0.64 -0.2 870,101 - AO353_04045 0.64 +0.5 870,310 + +0.3 870,310 + -0.1 870,310 + +0.1 870,310 + -0.1 870,310 + +0.2 870,310 + -0.2 870,310 + -0.5 870,310 + -0.1 870,310 + +0.8 870,311 - -0.1 870,311 - +0.1 870,311 - +0.2 870,311 - +0.4 870,328 + -0.4 870,328 + -0.7 870,328 + +0.2 870,329 - +0.2 870,329 - +1.8 870,331 + -1.8 870,331 + +0.9 870,331 + +0.7 870,331 + +0.5 870,331 + +0.5 870,331 + +0.2 870,331 + -0.2 870,331 + -0.8 870,332 - +0.1 870,332 - +0.5 870,332 - -1.7 870,332 - +0.5 870,332 - +0.0 870,332 - +1.0 870,332 - +0.0 870,332 - +0.3 870,332 - -0.8 870,332 - -0.7 870,373 + +1.5 870,374 - +0.3 870,450 + +1.5 870,450 + +0.2 870,470 + +1.0 870,470 + +0.5 870,470 + -0.1 870,493 + -0.1 870,557 + +1.1 870,557 + +1.5 870,558 - -1.5
Or see this region's nucleotide sequence