Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03030 and AO353_03035 are separated by 33 nucleotides AO353_03035 and AO353_03040 are separated by 112 nucleotides AO353_03040 and AO353_03045 are separated by 36 nucleotides
AO353_03030: AO353_03030 - hypothetical protein, at 643,279 to 647,994
_03030
AO353_03035: AO353_03035 - AraC family transcriptional regulator, at 648,028 to 649,008
_03035
AO353_03040: AO353_03040 - ABC transporter for L-Arginine and L-Citrulline, ATPase component <small>(from data)</small>, at 649,121 to 649,885
_03040
AO353_03045: AO353_03045 - ABC transporter for L-Arginine and L-Citrulline, permease component 1 <small>(from data)</small>, at 649,922 to 650,620
_03045
Position (kb) 648
649
650 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 647.083 kb on + strand, within AO353_03030 at 647.083 kb on + strand, within AO353_03030 at 647.083 kb on + strand, within AO353_03030 at 647.083 kb on + strand, within AO353_03030 at 647.316 kb on + strand, within AO353_03030 at 647.317 kb on - strand, within AO353_03030 at 647.317 kb on - strand, within AO353_03030 at 647.420 kb on + strand, within AO353_03030 at 647.420 kb on + strand, within AO353_03030 at 647.421 kb on - strand, within AO353_03030 at 647.438 kb on + strand, within AO353_03030 at 647.598 kb on - strand at 647.629 kb on + strand at 647.630 kb on - strand at 647.630 kb on - strand at 647.810 kb on + strand at 647.810 kb on + strand at 647.810 kb on + strand at 647.810 kb on + strand at 647.810 kb on + strand at 647.811 kb on - strand at 647.811 kb on - strand at 647.811 kb on - strand at 647.811 kb on - strand at 647.811 kb on - strand at 647.883 kb on - strand at 647.927 kb on + strand at 647.927 kb on + strand at 647.927 kb on + strand at 647.927 kb on + strand at 647.928 kb on - strand at 647.993 kb on - strand at 648.087 kb on + strand at 648.239 kb on + strand, within AO353_03035 at 648.239 kb on + strand, within AO353_03035 at 648.240 kb on - strand, within AO353_03035 at 648.242 kb on + strand, within AO353_03035 at 648.243 kb on - strand, within AO353_03035 at 648.243 kb on - strand, within AO353_03035 at 648.243 kb on - strand, within AO353_03035 at 648.266 kb on + strand, within AO353_03035 at 648.266 kb on + strand, within AO353_03035 at 648.266 kb on + strand, within AO353_03035 at 648.266 kb on + strand, within AO353_03035 at 648.267 kb on - strand, within AO353_03035 at 648.267 kb on - strand, within AO353_03035 at 648.267 kb on - strand, within AO353_03035 at 648.966 kb on + strand at 649.037 kb on + strand at 649.064 kb on + strand at 649.065 kb on - strand at 649.065 kb on - strand at 649.097 kb on + strand at 649.098 kb on - strand at 649.098 kb on - strand at 649.098 kb on - strand at 649.122 kb on + strand at 649.122 kb on + strand at 649.122 kb on + strand at 649.122 kb on + strand at 649.122 kb on + strand at 649.123 kb on - strand at 649.123 kb on - strand at 649.123 kb on - strand at 649.438 kb on + strand, within AO353_03040 at 649.438 kb on + strand, within AO353_03040 at 649.438 kb on + strand, within AO353_03040 at 649.438 kb on + strand, within AO353_03040 at 649.438 kb on + strand, within AO353_03040 at 649.438 kb on + strand, within AO353_03040 at 649.438 kb on + strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.439 kb on - strand, within AO353_03040 at 649.449 kb on + strand, within AO353_03040 at 649.450 kb on - strand, within AO353_03040 at 649.450 kb on - strand, within AO353_03040 at 649.459 kb on + strand, within AO353_03040 at 649.459 kb on + strand, within AO353_03040 at 649.488 kb on + strand, within AO353_03040 at 649.488 kb on + strand, within AO353_03040 at 649.488 kb on + strand, within AO353_03040 at 649.488 kb on + strand, within AO353_03040 at 649.488 kb on + strand, within AO353_03040 at 649.489 kb on - strand, within AO353_03040 at 649.489 kb on - strand, within AO353_03040 at 649.489 kb on - strand, within AO353_03040 at 649.756 kb on + strand, within AO353_03040 at 649.756 kb on + strand, within AO353_03040 at 649.757 kb on - strand, within AO353_03040 at 649.757 kb on - strand, within AO353_03040 at 649.757 kb on - strand, within AO353_03040 at 649.848 kb on + strand at 649.848 kb on + strand at 649.855 kb on + strand at 649.856 kb on - strand at 649.856 kb on - strand at 649.881 kb on + strand at 649.881 kb on + strand at 649.881 kb on + strand at 649.881 kb on + strand at 649.882 kb on - strand at 649.882 kb on - strand at 649.882 kb on - strand at 649.882 kb on - strand at 649.944 kb on + strand at 649.944 kb on + strand at 650.007 kb on + strand, within AO353_03045 at 650.007 kb on + strand, within AO353_03045 at 650.007 kb on + strand, within AO353_03045 at 650.007 kb on + strand, within AO353_03045 at 650.007 kb on + strand, within AO353_03045 at 650.007 kb on + strand, within AO353_03045 at 650.008 kb on - strand, within AO353_03045 at 650.008 kb on - strand, within AO353_03045 at 650.008 kb on - strand, within AO353_03045 at 650.008 kb on - strand, within AO353_03045
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 647,083 + AO353_03030 0.81 -0.7 647,083 + AO353_03030 0.81 +0.9 647,083 + AO353_03030 0.81 -1.2 647,083 + AO353_03030 0.81 -1.1 647,316 + AO353_03030 0.86 -1.0 647,317 - AO353_03030 0.86 +0.1 647,317 - AO353_03030 0.86 -1.1 647,420 + AO353_03030 0.88 -2.2 647,420 + AO353_03030 0.88 -1.1 647,421 - AO353_03030 0.88 +0.9 647,438 + AO353_03030 0.88 -1.9 647,598 - -1.0 647,629 + -0.1 647,630 - -1.1 647,630 - +0.2 647,810 + -1.3 647,810 + -0.9 647,810 + -0.7 647,810 + -1.3 647,810 + -2.6 647,811 - +1.2 647,811 - -0.5 647,811 - -0.1 647,811 - +0.4 647,811 - +0.1 647,883 - -0.6 647,927 + -2.1 647,927 + -0.8 647,927 + +0.4 647,927 + -2.1 647,928 - +1.4 647,993 - -0.7 648,087 + -0.1 648,239 + AO353_03035 0.22 -0.6 648,239 + AO353_03035 0.22 -2.5 648,240 - AO353_03035 0.22 -2.6 648,242 + AO353_03035 0.22 -3.8 648,243 - AO353_03035 0.22 -1.6 648,243 - AO353_03035 0.22 -0.9 648,243 - AO353_03035 0.22 -2.4 648,266 + AO353_03035 0.24 -1.9 648,266 + AO353_03035 0.24 -1.9 648,266 + AO353_03035 0.24 -0.6 648,266 + AO353_03035 0.24 -2.4 648,267 - AO353_03035 0.24 -2.0 648,267 - AO353_03035 0.24 -2.4 648,267 - AO353_03035 0.24 -3.3 648,966 + -1.1 649,037 + -2.0 649,064 + -2.7 649,065 - +0.7 649,065 - +1.3 649,097 + -1.3 649,098 - -1.4 649,098 - +0.9 649,098 - +0.6 649,122 + -2.3 649,122 + -1.1 649,122 + -2.5 649,122 + -3.6 649,122 + -1.6 649,123 - +1.0 649,123 - +0.4 649,123 - +0.4 649,438 + AO353_03040 0.41 -3.3 649,438 + AO353_03040 0.41 -3.6 649,438 + AO353_03040 0.41 -0.1 649,438 + AO353_03040 0.41 -3.6 649,438 + AO353_03040 0.41 -1.4 649,438 + AO353_03040 0.41 -0.4 649,438 + AO353_03040 0.41 -1.5 649,439 - AO353_03040 0.42 -2.3 649,439 - AO353_03040 0.42 -3.1 649,439 - AO353_03040 0.42 -3.0 649,439 - AO353_03040 0.42 -0.6 649,439 - AO353_03040 0.42 -1.9 649,439 - AO353_03040 0.42 -2.9 649,439 - AO353_03040 0.42 -0.7 649,439 - AO353_03040 0.42 -0.9 649,449 + AO353_03040 0.43 -3.7 649,450 - AO353_03040 0.43 -1.7 649,450 - AO353_03040 0.43 -2.1 649,459 + AO353_03040 0.44 -1.4 649,459 + AO353_03040 0.44 -2.6 649,488 + AO353_03040 0.48 -1.4 649,488 + AO353_03040 0.48 -2.6 649,488 + AO353_03040 0.48 -1.3 649,488 + AO353_03040 0.48 -2.6 649,488 + AO353_03040 0.48 -2.6 649,489 - AO353_03040 0.48 -2.4 649,489 - AO353_03040 0.48 -1.8 649,489 - AO353_03040 0.48 -0.6 649,756 + AO353_03040 0.83 -1.7 649,756 + AO353_03040 0.83 -1.4 649,757 - AO353_03040 0.83 -3.5 649,757 - AO353_03040 0.83 -2.6 649,757 - AO353_03040 0.83 -0.4 649,848 + -1.1 649,848 + -3.1 649,855 + -2.0 649,856 - -0.6 649,856 - -0.1 649,881 + -2.1 649,881 + -2.5 649,881 + -3.0 649,881 + -2.0 649,882 - -0.6 649,882 - -1.1 649,882 - -2.4 649,882 - -3.0 649,944 + -1.1 649,944 + -0.9 650,007 + AO353_03045 0.12 -3.5 650,007 + AO353_03045 0.12 -0.1 650,007 + AO353_03045 0.12 -0.1 650,007 + AO353_03045 0.12 -1.4 650,007 + AO353_03045 0.12 -1.6 650,007 + AO353_03045 0.12 +0.9 650,008 - AO353_03045 0.12 -2.0 650,008 - AO353_03045 0.12 -0.7 650,008 - AO353_03045 0.12 -2.6 650,008 - AO353_03045 0.12 -2.5
Or see this region's nucleotide sequence