Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01910 and AO353_01915 are separated by 103 nucleotides AO353_01915 and AO353_01920 are separated by 267 nucleotides
AO353_01910: AO353_01910 - hypothetical protein, at 403,223 to 404,290
_01910
AO353_01915: AO353_01915 - GlcG protein, at 404,394 to 404,834
_01915
AO353_01920: AO353_01920 - glyoxylate carboligase, at 405,102 to 406,877
_01920
Position (kb) 404
405 Strain fitness (log2 ratio) -2
-1
0
1
2 at 403.401 kb on - strand, within AO353_01910 at 403.401 kb on - strand, within AO353_01910 at 403.401 kb on - strand, within AO353_01910 at 403.404 kb on + strand, within AO353_01910 at 403.404 kb on + strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.405 kb on - strand, within AO353_01910 at 403.436 kb on - strand, within AO353_01910 at 403.482 kb on + strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.483 kb on - strand, within AO353_01910 at 403.548 kb on + strand, within AO353_01910 at 403.548 kb on + strand, within AO353_01910 at 403.604 kb on + strand, within AO353_01910 at 403.605 kb on - strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.612 kb on + strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.613 kb on - strand, within AO353_01910 at 403.615 kb on - strand, within AO353_01910 at 403.722 kb on + strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.723 kb on - strand, within AO353_01910 at 403.767 kb on - strand, within AO353_01910 at 403.767 kb on - strand, within AO353_01910 at 403.801 kb on + strand, within AO353_01910 at 403.801 kb on + strand, within AO353_01910 at 403.801 kb on + strand, within AO353_01910 at 404.021 kb on + strand, within AO353_01910 at 404.021 kb on + strand, within AO353_01910 at 404.021 kb on + strand, within AO353_01910 at 404.022 kb on - strand, within AO353_01910 at 404.037 kb on + strand, within AO353_01910 at 404.048 kb on + strand, within AO353_01910 at 404.049 kb on - strand, within AO353_01910 at 404.049 kb on - strand, within AO353_01910 at 404.138 kb on + strand, within AO353_01910 at 404.138 kb on + strand, within AO353_01910 at 404.139 kb on - strand, within AO353_01910 at 404.187 kb on - strand at 404.246 kb on + strand at 404.246 kb on + strand at 404.272 kb on + strand at 404.273 kb on - strand at 404.332 kb on + strand at 404.332 kb on + strand at 404.332 kb on + strand at 404.332 kb on + strand at 404.332 kb on + strand at 404.332 kb on + strand at 404.332 kb on + strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.333 kb on - strand at 404.334 kb on + strand at 404.334 kb on + strand at 404.334 kb on + strand at 404.334 kb on + strand at 404.334 kb on + strand at 404.335 kb on - strand at 404.385 kb on + strand at 404.386 kb on - strand at 404.386 kb on - strand at 404.585 kb on + strand, within AO353_01915 at 404.739 kb on + strand, within AO353_01915 at 404.740 kb on - strand, within AO353_01915 at 404.823 kb on + strand at 404.847 kb on + strand at 404.847 kb on + strand at 404.847 kb on + strand at 404.847 kb on + strand at 404.848 kb on - strand at 404.848 kb on - strand at 404.848 kb on - strand at 404.905 kb on - strand at 404.949 kb on - strand at 404.975 kb on + strand at 404.975 kb on + strand at 404.975 kb on + strand at 404.975 kb on + strand at 404.975 kb on + strand at 404.976 kb on - strand at 404.976 kb on - strand at 404.976 kb on - strand at 404.979 kb on + strand at 404.979 kb on + strand at 404.979 kb on + strand at 404.979 kb on + strand at 404.980 kb on - strand at 404.980 kb on - strand at 404.980 kb on - strand at 404.980 kb on - strand at 404.980 kb on - strand at 404.980 kb on - strand at 404.980 kb on - strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.045 kb on + strand at 405.046 kb on - strand at 405.046 kb on - strand at 405.046 kb on - strand at 405.046 kb on - strand at 405.046 kb on - strand at 405.046 kb on - strand at 405.046 kb on - strand at 405.046 kb on - strand at 405.202 kb on - strand at 405.202 kb on - strand at 405.202 kb on - strand at 405.282 kb on + strand, within AO353_01920 at 405.363 kb on + strand, within AO353_01920 at 405.363 kb on + strand, within AO353_01920 at 405.363 kb on + strand, within AO353_01920 at 405.523 kb on - strand, within AO353_01920 at 405.523 kb on - strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.543 kb on + strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.544 kb on - strand, within AO353_01920 at 405.633 kb on + strand, within AO353_01920 at 405.633 kb on + strand, within AO353_01920 at 405.633 kb on + strand, within AO353_01920 at 405.634 kb on - strand, within AO353_01920 at 405.634 kb on - strand, within AO353_01920 at 405.634 kb on - strand, within AO353_01920 at 405.634 kb on - strand, within AO353_01920
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 403,401 - AO353_01910 0.17 -0.8 403,401 - AO353_01910 0.17 +1.6 403,401 - AO353_01910 0.17 -1.3 403,404 + AO353_01910 0.17 +0.8 403,404 + AO353_01910 0.17 +0.6 403,405 - AO353_01910 0.17 +0.3 403,405 - AO353_01910 0.17 +0.1 403,405 - AO353_01910 0.17 -0.7 403,405 - AO353_01910 0.17 +0.8 403,436 - AO353_01910 0.20 -1.0 403,482 + AO353_01910 0.24 -2.0 403,483 - AO353_01910 0.24 +1.0 403,483 - AO353_01910 0.24 -1.5 403,483 - AO353_01910 0.24 +0.6 403,483 - AO353_01910 0.24 -0.4 403,483 - AO353_01910 0.24 +0.5 403,548 + AO353_01910 0.30 -0.3 403,548 + AO353_01910 0.30 -0.7 403,604 + AO353_01910 0.36 +0.6 403,605 - AO353_01910 0.36 +0.0 403,612 + AO353_01910 0.36 -1.0 403,612 + AO353_01910 0.36 +0.2 403,612 + AO353_01910 0.36 +1.1 403,612 + AO353_01910 0.36 +0.2 403,612 + AO353_01910 0.36 -0.4 403,612 + AO353_01910 0.36 +0.1 403,612 + AO353_01910 0.36 +0.3 403,613 - AO353_01910 0.37 -0.1 403,613 - AO353_01910 0.37 -0.7 403,613 - AO353_01910 0.37 +0.6 403,613 - AO353_01910 0.37 -1.1 403,613 - AO353_01910 0.37 +0.1 403,613 - AO353_01910 0.37 +0.9 403,613 - AO353_01910 0.37 -1.8 403,613 - AO353_01910 0.37 +0.0 403,613 - AO353_01910 0.37 +0.7 403,613 - AO353_01910 0.37 -0.2 403,613 - AO353_01910 0.37 -0.1 403,613 - AO353_01910 0.37 -1.7 403,615 - AO353_01910 0.37 -0.5 403,722 + AO353_01910 0.47 +0.3 403,723 - AO353_01910 0.47 +0.3 403,723 - AO353_01910 0.47 -0.1 403,723 - AO353_01910 0.47 +1.3 403,723 - AO353_01910 0.47 -0.7 403,723 - AO353_01910 0.47 +1.3 403,723 - AO353_01910 0.47 -0.3 403,767 - AO353_01910 0.51 +1.3 403,767 - AO353_01910 0.51 +0.3 403,801 + AO353_01910 0.54 +1.0 403,801 + AO353_01910 0.54 -1.3 403,801 + AO353_01910 0.54 +0.3 404,021 + AO353_01910 0.75 -1.7 404,021 + AO353_01910 0.75 -1.1 404,021 + AO353_01910 0.75 -0.8 404,022 - AO353_01910 0.75 -2.0 404,037 + AO353_01910 0.76 +1.0 404,048 + AO353_01910 0.77 -0.1 404,049 - AO353_01910 0.77 +0.0 404,049 - AO353_01910 0.77 +0.0 404,138 + AO353_01910 0.86 +0.4 404,138 + AO353_01910 0.86 -0.5 404,139 - AO353_01910 0.86 +0.7 404,187 - -0.5 404,246 + +0.1 404,246 + +0.1 404,272 + +0.3 404,273 - +1.3 404,332 + +0.1 404,332 + +0.0 404,332 + +0.5 404,332 + -1.3 404,332 + -1.5 404,332 + +0.6 404,332 + -1.1 404,333 - +1.3 404,333 - -0.3 404,333 - -0.1 404,333 - +0.9 404,333 - -1.3 404,333 - -0.5 404,333 - -2.0 404,333 - -2.2 404,333 - -1.1 404,333 - -1.0 404,333 - -1.4 404,333 - -1.0 404,334 + +0.0 404,334 + +0.7 404,334 + +0.3 404,334 + -1.0 404,334 + +1.3 404,335 - -1.4 404,385 + -1.1 404,386 - +1.0 404,386 - +0.2 404,585 + AO353_01915 0.43 -2.5 404,739 + AO353_01915 0.78 -1.0 404,740 - AO353_01915 0.78 -0.4 404,823 + +1.0 404,847 + +0.3 404,847 + +0.3 404,847 + -1.8 404,847 + -0.3 404,848 - -0.7 404,848 - -0.5 404,848 - -0.3 404,905 - +0.1 404,949 - -0.5 404,975 + -0.1 404,975 + -0.3 404,975 + +0.7 404,975 + +0.0 404,975 + +0.8 404,976 - -0.3 404,976 - -1.7 404,976 - +0.6 404,979 + -1.4 404,979 + -1.1 404,979 + +0.7 404,979 + +1.3 404,980 - +0.0 404,980 - +1.3 404,980 - +0.3 404,980 - -0.3 404,980 - +0.0 404,980 - -0.1 404,980 - +0.1 405,045 + -1.1 405,045 + -0.5 405,045 + -1.0 405,045 + -2.6 405,045 + -0.3 405,045 + -0.7 405,045 + +1.7 405,045 + -1.0 405,045 + +0.9 405,045 + +0.3 405,046 - +0.0 405,046 - -1.1 405,046 - -0.7 405,046 - -0.4 405,046 - -0.4 405,046 - -0.8 405,046 - -0.4 405,046 - +1.0 405,202 - +0.7 405,202 - -1.2 405,202 - +1.9 405,282 + AO353_01920 0.10 -0.5 405,363 + AO353_01920 0.15 -1.1 405,363 + AO353_01920 0.15 +0.3 405,363 + AO353_01920 0.15 +1.1 405,523 - AO353_01920 0.24 +0.9 405,523 - AO353_01920 0.24 -0.0 405,543 + AO353_01920 0.25 +0.2 405,543 + AO353_01920 0.25 -0.3 405,543 + AO353_01920 0.25 -0.4 405,543 + AO353_01920 0.25 +0.8 405,543 + AO353_01920 0.25 -0.4 405,543 + AO353_01920 0.25 +1.9 405,543 + AO353_01920 0.25 -1.0 405,543 + AO353_01920 0.25 +0.0 405,543 + AO353_01920 0.25 -1.1 405,543 + AO353_01920 0.25 -0.5 405,543 + AO353_01920 0.25 +0.0 405,544 - AO353_01920 0.25 -1.7 405,544 - AO353_01920 0.25 -1.6 405,544 - AO353_01920 0.25 +1.1 405,544 - AO353_01920 0.25 +1.3 405,544 - AO353_01920 0.25 -0.1 405,544 - AO353_01920 0.25 +1.5 405,544 - AO353_01920 0.25 +0.3 405,544 - AO353_01920 0.25 -0.3 405,633 + AO353_01920 0.30 +0.8 405,633 + AO353_01920 0.30 -1.2 405,633 + AO353_01920 0.30 -1.0 405,634 - AO353_01920 0.30 -0.7 405,634 - AO353_01920 0.30 +0.6 405,634 - AO353_01920 0.30 +1.7 405,634 - AO353_01920 0.30 -0.2
Or see this region's nucleotide sequence