Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_01765

Experiment: L-Arginine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_01760 and AO353_01765 are separated by 274 nucleotidesAO353_01765 and AO353_01770 are separated by 62 nucleotides AO353_01760: AO353_01760 - 3-oxoacyl-ACP synthase, at 370,092 to 371,312 _01760 AO353_01765: AO353_01765 - peroxiredoxin, at 371,587 to 372,003 _01765 AO353_01770: AO353_01770 - pirin, at 372,066 to 372,953 _01770 Position (kb) 371 372 373Strain fitness (log2 ratio) -2 -1 0 1 2at 371.310 kb on + strandat 371.310 kb on + strandat 371.311 kb on - strandat 371.378 kb on + strandat 371.378 kb on + strandat 371.379 kb on - strandat 371.379 kb on - strandat 371.386 kb on + strandat 371.386 kb on + strandat 371.387 kb on - strandat 371.387 kb on - strandat 371.387 kb on - strandat 371.387 kb on - strandat 371.387 kb on - strandat 371.425 kb on - strandat 371.442 kb on + strandat 371.443 kb on - strandat 371.443 kb on - strandat 371.443 kb on - strandat 371.443 kb on - strandat 371.443 kb on - strandat 371.443 kb on - strandat 371.529 kb on + strandat 371.529 kb on + strandat 371.529 kb on + strandat 371.529 kb on + strandat 371.530 kb on - strandat 371.530 kb on - strandat 371.530 kb on - strandat 371.530 kb on - strandat 371.530 kb on - strandat 371.530 kb on - strandat 371.530 kb on - strandat 371.531 kb on + strandat 371.531 kb on + strandat 371.531 kb on + strandat 371.531 kb on + strandat 371.531 kb on + strandat 371.532 kb on - strandat 371.532 kb on - strandat 371.532 kb on - strandat 371.544 kb on + strandat 371.544 kb on + strandat 371.545 kb on - strandat 371.545 kb on - strandat 371.545 kb on - strandat 371.545 kb on - strandat 371.545 kb on - strandat 371.567 kb on + strandat 371.716 kb on + strand, within AO353_01765at 371.716 kb on + strand, within AO353_01765at 371.717 kb on - strand, within AO353_01765at 371.717 kb on - strand, within AO353_01765at 371.764 kb on + strand, within AO353_01765at 371.764 kb on + strand, within AO353_01765at 371.765 kb on - strand, within AO353_01765at 371.845 kb on + strand, within AO353_01765at 371.845 kb on + strand, within AO353_01765at 371.845 kb on + strand, within AO353_01765at 371.845 kb on + strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.846 kb on - strand, within AO353_01765at 371.880 kb on - strand, within AO353_01765at 372.028 kb on - strandat 372.049 kb on - strandat 372.049 kb on - strandat 372.261 kb on + strand, within AO353_01770at 372.261 kb on + strand, within AO353_01770at 372.261 kb on + strand, within AO353_01770at 372.262 kb on - strand, within AO353_01770at 372.262 kb on - strand, within AO353_01770at 372.262 kb on - strand, within AO353_01770at 372.262 kb on - strand, within AO353_01770at 372.468 kb on + strand, within AO353_01770at 372.469 kb on - strand, within AO353_01770at 372.588 kb on + strand, within AO353_01770at 372.657 kb on + strand, within AO353_01770at 372.658 kb on - strand, within AO353_01770at 372.658 kb on - strand, within AO353_01770at 372.658 kb on - strand, within AO353_01770at 372.658 kb on - strand, within AO353_01770at 372.715 kb on + strand, within AO353_01770at 372.715 kb on + strand, within AO353_01770at 372.716 kb on - strand, within AO353_01770at 372.716 kb on - strand, within AO353_01770at 372.716 kb on - strand, within AO353_01770at 372.923 kb on + strandat 372.923 kb on + strandat 372.924 kb on - strandat 372.924 kb on - strandat 372.951 kb on + strandat 372.952 kb on - strandat 372.952 kb on - strandat 372.952 kb on - strandat 372.952 kb on - strandat 372.952 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (C)
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371,310 + -1.7
371,310 + -0.7
371,311 - -0.7
371,378 + -0.3
371,378 + +0.2
371,379 - -1.1
371,379 - -0.6
371,386 + +0.2
371,386 + +0.2
371,387 - -0.7
371,387 - -1.3
371,387 - -1.1
371,387 - +0.1
371,387 - +0.9
371,425 - -1.8
371,442 + -0.6
371,443 - -0.0
371,443 - +2.1
371,443 - +2.3
371,443 - -0.0
371,443 - +0.2
371,443 - -0.0
371,529 + -0.3
371,529 + +0.7
371,529 + -0.4
371,529 + -0.5
371,530 - -0.4
371,530 - -1.1
371,530 - +0.2
371,530 - -0.1
371,530 - -1.0
371,530 - -1.0
371,530 - -0.3
371,531 + +0.1
371,531 + +1.3
371,531 + +0.3
371,531 + +1.3
371,531 + +0.1
371,532 - -1.5
371,532 - +1.1
371,532 - -0.0
371,544 + +0.3
371,544 + +0.3
371,545 - -0.6
371,545 - +0.9
371,545 - -0.2
371,545 - -0.3
371,545 - +0.1
371,567 + -2.4
371,716 + AO353_01765 0.31 +0.7
371,716 + AO353_01765 0.31 +0.4
371,717 - AO353_01765 0.31 -0.3
371,717 - AO353_01765 0.31 +0.6
371,764 + AO353_01765 0.42 +1.3
371,764 + AO353_01765 0.42 -0.3
371,765 - AO353_01765 0.43 -0.8
371,845 + AO353_01765 0.62 +0.9
371,845 + AO353_01765 0.62 -0.4
371,845 + AO353_01765 0.62 +1.3
371,845 + AO353_01765 0.62 -0.1
371,846 - AO353_01765 0.62 +0.2
371,846 - AO353_01765 0.62 +1.1
371,846 - AO353_01765 0.62 +0.5
371,846 - AO353_01765 0.62 -0.1
371,846 - AO353_01765 0.62 -0.4
371,846 - AO353_01765 0.62 +1.3
371,846 - AO353_01765 0.62 +0.1
371,846 - AO353_01765 0.62 +0.3
371,880 - AO353_01765 0.70 +1.0
372,028 - +0.3
372,049 - +0.2
372,049 - -0.7
372,261 + AO353_01770 0.22 -0.7
372,261 + AO353_01770 0.22 -0.5
372,261 + AO353_01770 0.22 -0.7
372,262 - AO353_01770 0.22 -0.6
372,262 - AO353_01770 0.22 +0.3
372,262 - AO353_01770 0.22 -0.8
372,262 - AO353_01770 0.22 -1.0
372,468 + AO353_01770 0.45 -1.7
372,469 - AO353_01770 0.45 -0.3
372,588 + AO353_01770 0.59 -0.0
372,657 + AO353_01770 0.67 +1.3
372,658 - AO353_01770 0.67 -0.4
372,658 - AO353_01770 0.67 +0.3
372,658 - AO353_01770 0.67 +1.1
372,658 - AO353_01770 0.67 -0.4
372,715 + AO353_01770 0.73 -0.0
372,715 + AO353_01770 0.73 -0.2
372,716 - AO353_01770 0.73 -1.0
372,716 - AO353_01770 0.73 -0.3
372,716 - AO353_01770 0.73 -0.7
372,923 + -0.7
372,923 + +0.9
372,924 - -1.6
372,924 - -0.9
372,951 + -0.1
372,952 - -0.2
372,952 - -0.4
372,952 - -0.1
372,952 - +0.9
372,952 - +0.7

Or see this region's nucleotide sequence