Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00950 and AO353_00955 are separated by 256 nucleotides AO353_00955 and AO353_00960 overlap by 20 nucleotides AO353_00960 and AO353_00965 are separated by 131 nucleotides
AO353_00950: AO353_00950 - HAD family hydrolase, at 215,677 to 216,369
_00950
AO353_00955: AO353_00955 - cytotoxic translational repressor of toxin-antitoxin stability system, at 216,626 to 216,880
_00955
AO353_00960: AO353_00960 - DNA-binding protein, at 216,861 to 217,187
_00960
AO353_00965: AO353_00965 - bacteriocin, at 217,319 to 217,663
_00965
Position (kb) 216
217 Strain fitness (log2 ratio) -2
-1
0
1
2 at 215.705 kb on + strand at 215.705 kb on + strand at 215.705 kb on + strand at 215.705 kb on + strand at 215.705 kb on + strand at 215.706 kb on - strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.733 kb on + strand at 215.734 kb on - strand at 215.734 kb on - strand at 215.759 kb on + strand, within AO353_00950 at 215.760 kb on - strand, within AO353_00950 at 215.904 kb on + strand at 216.045 kb on + strand, within AO353_00950 at 216.045 kb on + strand, within AO353_00950 at 216.045 kb on + strand, within AO353_00950 at 216.045 kb on + strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.046 kb on - strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.185 kb on + strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.186 kb on - strand, within AO353_00950 at 216.255 kb on - strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.287 kb on + strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.288 kb on - strand, within AO353_00950 at 216.291 kb on + strand, within AO353_00950 at 216.291 kb on + strand, within AO353_00950 at 216.291 kb on + strand, within AO353_00950 at 216.292 kb on - strand, within AO353_00950 at 216.292 kb on - strand, within AO353_00950 at 216.417 kb on - strand at 216.417 kb on - strand at 216.531 kb on - strand at 216.531 kb on - strand at 216.531 kb on - strand at 216.540 kb on - strand at 216.575 kb on - strand at 216.639 kb on - strand at 216.639 kb on - strand at 216.675 kb on + strand, within AO353_00955 at 216.676 kb on - strand, within AO353_00955 at 216.797 kb on + strand, within AO353_00955 at 216.798 kb on - strand, within AO353_00955 at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.875 kb on + strand at 216.876 kb on - strand at 216.876 kb on - strand at 216.876 kb on - strand at 216.883 kb on + strand at 216.883 kb on + strand at 216.883 kb on + strand at 216.883 kb on + strand at 216.883 kb on + strand at 216.883 kb on + strand at 216.883 kb on + strand at 216.883 kb on + strand at 216.884 kb on - strand at 216.884 kb on - strand at 216.884 kb on - strand at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.942 kb on + strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand at 216.943 kb on - strand at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.943 kb on - strand, within AO353_00960 at 216.995 kb on + strand, within AO353_00960 at 216.995 kb on + strand, within AO353_00960 at 216.995 kb on + strand, within AO353_00960 at 216.995 kb on + strand, within AO353_00960 at 216.995 kb on + strand, within AO353_00960 at 216.995 kb on + strand, within AO353_00960 at 216.996 kb on - strand, within AO353_00960 at 216.996 kb on - strand, within AO353_00960 at 217.227 kb on + strand at 217.227 kb on + strand at 217.228 kb on - strand at 217.299 kb on + strand at 217.320 kb on + strand at 217.320 kb on + strand at 217.320 kb on + strand at 217.320 kb on + strand at 217.320 kb on + strand at 217.320 kb on + strand at 217.321 kb on - strand at 217.321 kb on - strand at 217.321 kb on - strand at 217.321 kb on - strand at 217.321 kb on - strand at 217.321 kb on - strand at 217.427 kb on + strand, within AO353_00965 at 217.655 kb on + strand at 217.691 kb on + strand at 217.691 kb on + strand at 217.691 kb on + strand at 217.692 kb on - strand at 217.692 kb on - strand at 217.692 kb on - strand at 217.692 kb on - strand at 217.709 kb on + strand at 217.709 kb on + strand at 217.709 kb on + strand at 217.709 kb on + strand at 217.709 kb on + strand at 217.710 kb on - strand at 217.710 kb on - strand at 217.775 kb on + strand at 217.775 kb on + strand at 217.775 kb on + strand at 217.775 kb on + strand at 217.776 kb on - strand at 217.776 kb on - strand at 217.776 kb on - strand at 217.776 kb on - strand at 217.777 kb on + strand at 217.777 kb on + strand at 217.777 kb on + strand at 217.777 kb on + strand at 217.777 kb on + strand at 217.778 kb on - strand at 217.778 kb on - strand at 217.778 kb on - strand at 217.778 kb on - strand at 217.778 kb on - strand at 217.870 kb on - strand at 217.870 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 215,705 + +0.5 215,705 + +0.6 215,705 + -0.2 215,705 + -0.1 215,705 + -0.5 215,706 - -1.0 215,733 + +1.7 215,733 + +0.2 215,733 + -0.6 215,733 + -1.3 215,733 + +0.4 215,734 - +0.1 215,734 - -1.4 215,759 + AO353_00950 0.12 -0.6 215,760 - AO353_00950 0.12 +1.1 215,904 + +0.2 216,045 + AO353_00950 0.53 -0.2 216,045 + AO353_00950 0.53 +1.2 216,045 + AO353_00950 0.53 -1.3 216,045 + AO353_00950 0.53 +0.3 216,046 - AO353_00950 0.53 +2.6 216,046 - AO353_00950 0.53 +0.2 216,046 - AO353_00950 0.53 +1.1 216,046 - AO353_00950 0.53 -1.8 216,185 + AO353_00950 0.73 +0.6 216,185 + AO353_00950 0.73 +0.1 216,185 + AO353_00950 0.73 +1.2 216,185 + AO353_00950 0.73 -0.9 216,186 - AO353_00950 0.73 +0.2 216,186 - AO353_00950 0.73 +0.2 216,186 - AO353_00950 0.73 -0.6 216,186 - AO353_00950 0.73 +0.2 216,255 - AO353_00950 0.83 -1.4 216,287 + AO353_00950 0.88 -0.2 216,287 + AO353_00950 0.88 +1.0 216,287 + AO353_00950 0.88 +0.9 216,287 + AO353_00950 0.88 +0.7 216,287 + AO353_00950 0.88 -0.3 216,287 + AO353_00950 0.88 -0.4 216,287 + AO353_00950 0.88 +0.1 216,288 - AO353_00950 0.88 -0.8 216,288 - AO353_00950 0.88 -0.6 216,288 - AO353_00950 0.88 -0.3 216,288 - AO353_00950 0.88 -1.3 216,288 - AO353_00950 0.88 -0.1 216,288 - AO353_00950 0.88 -1.6 216,288 - AO353_00950 0.88 -1.6 216,288 - AO353_00950 0.88 -0.4 216,288 - AO353_00950 0.88 -0.8 216,291 + AO353_00950 0.89 +0.2 216,291 + AO353_00950 0.89 -0.3 216,291 + AO353_00950 0.89 -0.3 216,292 - AO353_00950 0.89 +0.9 216,292 - AO353_00950 0.89 +0.1 216,417 - +0.1 216,417 - -0.5 216,531 - -0.5 216,531 - -0.9 216,531 - +0.0 216,540 - +0.5 216,575 - +1.2 216,639 - +0.0 216,639 - +0.8 216,675 + AO353_00955 0.19 +0.2 216,676 - AO353_00955 0.20 +0.4 216,797 + AO353_00955 0.67 +1.1 216,798 - AO353_00955 0.67 -0.0 216,875 + -0.3 216,875 + -0.5 216,875 + -0.8 216,875 + -0.0 216,875 + -1.0 216,875 + -0.1 216,875 + +0.0 216,875 + +0.1 216,875 + +0.2 216,875 + +0.2 216,875 + -0.9 216,876 - -0.0 216,876 - -0.8 216,876 - +1.2 216,883 + +1.4 216,883 + +1.2 216,883 + +1.2 216,883 + +1.6 216,883 + -0.6 216,883 + -1.1 216,883 + -0.6 216,883 + +0.1 216,884 - +0.1 216,884 - +0.2 216,884 - -1.1 216,942 + AO353_00960 0.25 -0.1 216,942 + AO353_00960 0.25 -0.5 216,942 + AO353_00960 0.25 +0.0 216,942 + AO353_00960 0.25 +0.5 216,942 + AO353_00960 0.25 -1.1 216,942 + AO353_00960 0.25 -1.5 216,942 + AO353_00960 0.25 -0.8 216,942 + AO353_00960 0.25 -1.8 216,942 + AO353_00960 0.25 -0.3 216,942 + AO353_00960 0.25 +0.0 216,942 + AO353_00960 0.25 -1.3 216,942 + AO353_00960 0.25 +0.8 216,942 + AO353_00960 0.25 +0.2 216,943 - AO353_00960 0.25 +0.5 216,943 - AO353_00960 0.25 -0.2 216,943 - +0.2 216,943 - AO353_00960 0.25 +0.4 216,943 - AO353_00960 0.25 -0.1 216,943 - AO353_00960 0.25 +0.5 216,943 - AO353_00960 0.25 +0.6 216,943 - +0.4 216,943 - +2.2 216,943 - AO353_00960 0.25 -0.7 216,943 - AO353_00960 0.25 +0.7 216,943 - AO353_00960 0.25 +1.2 216,943 - AO353_00960 0.25 -0.3 216,943 - AO353_00960 0.25 +0.5 216,995 + AO353_00960 0.41 -0.3 216,995 + AO353_00960 0.41 -1.5 216,995 + AO353_00960 0.41 -0.6 216,995 + AO353_00960 0.41 +0.2 216,995 + AO353_00960 0.41 +0.3 216,995 + AO353_00960 0.41 +0.4 216,996 - AO353_00960 0.41 +2.0 216,996 - AO353_00960 0.41 +0.6 217,227 + -2.2 217,227 + -0.3 217,228 - -0.7 217,299 + +0.2 217,320 + -2.5 217,320 + +0.6 217,320 + -0.5 217,320 + +0.8 217,320 + +0.1 217,320 + -2.5 217,321 - -0.0 217,321 - +0.1 217,321 - -0.3 217,321 - +0.8 217,321 - +0.7 217,321 - -0.3 217,427 + AO353_00965 0.31 -0.3 217,655 + -0.3 217,691 + +0.3 217,691 + -0.1 217,691 + +0.2 217,692 - +0.5 217,692 - +0.5 217,692 - +0.0 217,692 - +0.5 217,709 + -0.5 217,709 + -1.6 217,709 + +0.2 217,709 + -0.0 217,709 + -0.1 217,710 - +0.3 217,710 - -0.6 217,775 + -0.2 217,775 + -0.1 217,775 + +1.8 217,775 + -0.3 217,776 - +0.2 217,776 - +0.0 217,776 - -1.1 217,776 - +1.0 217,777 + -0.8 217,777 + -1.8 217,777 + -0.9 217,777 + +0.2 217,777 + -0.5 217,778 - -0.6 217,778 - -1.3 217,778 - +0.9 217,778 - -0.6 217,778 - +1.1 217,870 - -0.0 217,870 - +1.2
Or see this region's nucleotide sequence