Experiment: L-Arginine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00495 and AO353_00500 are separated by 114 nucleotides AO353_00500 and AO353_00505 are separated by 100 nucleotides AO353_00505 and AO353_00510 are separated by 30 nucleotides
AO353_00495: AO353_00495 - DNA topoisomerase I, at 98,826 to 101,447
_00495
AO353_00500: AO353_00500 - TonB box-like protein, at 101,562 to 101,798
_00500
AO353_00505: AO353_00505 - 3-ketoacyl-CoA thiolase, at 101,899 to 103,074
_00505
AO353_00510: AO353_00510 - multifunctional fatty acid oxidation complex subunit alpha, at 103,105 to 105,252
_00510
Position (kb) 101
102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 101.471 kb on - strand at 101.471 kb on - strand at 101.509 kb on - strand at 101.509 kb on - strand at 101.509 kb on - strand at 101.509 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.511 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.513 kb on - strand at 101.514 kb on + strand at 101.514 kb on + strand at 101.515 kb on - strand at 101.515 kb on - strand at 101.515 kb on - strand at 101.515 kb on - strand at 101.515 kb on - strand at 101.686 kb on + strand, within AO353_00500 at 101.686 kb on + strand, within AO353_00500 at 101.686 kb on + strand, within AO353_00500 at 101.698 kb on + strand, within AO353_00500 at 101.698 kb on + strand, within AO353_00500 at 101.698 kb on + strand, within AO353_00500 at 101.698 kb on + strand at 101.698 kb on + strand, within AO353_00500 at 101.699 kb on - strand, within AO353_00500 at 101.745 kb on + strand, within AO353_00500 at 101.745 kb on + strand, within AO353_00500 at 101.746 kb on - strand, within AO353_00500 at 101.752 kb on + strand, within AO353_00500 at 101.752 kb on + strand, within AO353_00500 at 101.767 kb on + strand, within AO353_00500 at 101.767 kb on + strand, within AO353_00500 at 101.767 kb on + strand, within AO353_00500 at 101.768 kb on - strand, within AO353_00500 at 101.768 kb on - strand, within AO353_00500 at 101.768 kb on - strand, within AO353_00500 at 101.776 kb on + strand at 101.776 kb on + strand at 101.790 kb on + strand at 101.790 kb on + strand at 101.828 kb on + strand at 101.900 kb on + strand at 101.956 kb on + strand at 101.956 kb on + strand at 101.956 kb on + strand at 101.957 kb on - strand at 101.986 kb on + strand at 101.986 kb on + strand at 101.986 kb on + strand at 101.986 kb on + strand at 101.986 kb on + strand at 101.986 kb on + strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 101.987 kb on - strand at 102.009 kb on + strand at 102.009 kb on + strand at 102.009 kb on + strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.010 kb on - strand at 102.420 kb on + strand, within AO353_00505 at 102.421 kb on - strand, within AO353_00505 at 102.421 kb on - strand, within AO353_00505 at 102.421 kb on - strand, within AO353_00505 at 102.531 kb on + strand, within AO353_00505 at 102.531 kb on + strand, within AO353_00505 at 102.531 kb on + strand, within AO353_00505 at 102.532 kb on - strand, within AO353_00505 at 102.648 kb on - strand, within AO353_00505 at 102.703 kb on - strand, within AO353_00505 at 102.703 kb on - strand, within AO353_00505 at 102.703 kb on - strand, within AO353_00505 at 103.060 kb on - strand at 103.060 kb on - strand at 103.060 kb on - strand at 103.074 kb on + strand at 103.075 kb on - strand at 103.075 kb on - strand at 103.075 kb on - strand at 103.075 kb on - strand at 103.075 kb on - strand at 103.076 kb on + strand at 103.076 kb on + strand at 103.076 kb on + strand at 103.077 kb on - strand at 103.077 kb on - strand at 103.094 kb on - strand at 103.094 kb on - strand at 103.164 kb on - strand at 103.184 kb on + strand at 103.233 kb on - strand at 103.233 kb on - strand at 103.274 kb on + strand at 103.274 kb on + strand at 103.274 kb on + strand at 103.275 kb on - strand at 103.275 kb on - strand at 103.275 kb on - strand at 103.444 kb on + strand, within AO353_00510 at 103.479 kb on - strand, within AO353_00510 at 103.484 kb on + strand, within AO353_00510 at 103.484 kb on + strand, within AO353_00510 at 103.484 kb on + strand, within AO353_00510 at 103.484 kb on + strand, within AO353_00510 at 103.485 kb on - strand, within AO353_00510 at 103.485 kb on - strand, within AO353_00510 at 103.526 kb on + strand, within AO353_00510 at 103.527 kb on - strand, within AO353_00510 at 103.527 kb on - strand, within AO353_00510 at 103.527 kb on - strand, within AO353_00510 at 104.037 kb on + strand, within AO353_00510 at 104.038 kb on - strand, within AO353_00510
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (C) remove 101,471 - +0.2 101,471 - -2.6 101,509 - -0.1 101,509 - +1.2 101,509 - -1.5 101,509 - +1.2 101,511 - -0.1 101,511 - -0.6 101,511 - +0.4 101,511 - -0.6 101,511 - -0.1 101,511 - +0.5 101,511 - +0.9 101,511 - +1.0 101,511 - +0.0 101,511 - -0.6 101,511 - +1.6 101,511 - -1.9 101,511 - -0.2 101,511 - -0.4 101,511 - -0.0 101,511 - +0.5 101,511 - +1.2 101,511 - +0.2 101,511 - +1.5 101,511 - +0.0 101,511 - +0.3 101,513 - +0.8 101,513 - +2.0 101,513 - -0.0 101,513 - +0.1 101,513 - -0.6 101,513 - +1.6 101,513 - +0.5 101,513 - +0.8 101,513 - +1.2 101,513 - -0.4 101,513 - -0.8 101,513 - +1.6 101,513 - +1.0 101,513 - +0.4 101,513 - +0.4 101,513 - +0.1 101,513 - +2.6 101,513 - -0.1 101,513 - +1.2 101,513 - -0.0 101,513 - -1.6 101,513 - +0.7 101,513 - -1.1 101,513 - +1.6 101,513 - -0.4 101,513 - +1.4 101,513 - +3.0 101,513 - +0.2 101,513 - -0.8 101,513 - -1.1 101,513 - -0.9 101,513 - +0.2 101,513 - +0.6 101,514 + -0.8 101,514 + -0.4 101,515 - -0.3 101,515 - +0.4 101,515 - +0.5 101,515 - -0.4 101,515 - +0.6 101,686 + AO353_00500 0.52 -0.9 101,686 + AO353_00500 0.52 +0.8 101,686 + AO353_00500 0.52 +0.2 101,698 + AO353_00500 0.57 -0.1 101,698 + AO353_00500 0.57 -0.5 101,698 + AO353_00500 0.57 -0.4 101,698 + +1.2 101,698 + AO353_00500 0.57 +0.2 101,699 - AO353_00500 0.58 +1.6 101,745 + AO353_00500 0.77 -1.2 101,745 + AO353_00500 0.77 -0.6 101,746 - AO353_00500 0.78 -1.1 101,752 + AO353_00500 0.80 -1.1 101,752 + AO353_00500 0.80 -1.1 101,767 + AO353_00500 0.86 -1.4 101,767 + AO353_00500 0.86 -1.7 101,767 + AO353_00500 0.86 -1.9 101,768 - AO353_00500 0.87 +0.9 101,768 - AO353_00500 0.87 -1.4 101,768 - AO353_00500 0.87 -0.1 101,776 + -1.6 101,776 + -0.8 101,790 + -1.8 101,790 + +0.8 101,828 + -1.5 101,900 + -0.1 101,956 + -0.8 101,956 + -0.6 101,956 + +0.9 101,957 - -1.2 101,986 + -2.9 101,986 + -0.8 101,986 + -2.5 101,986 + -0.4 101,986 + -0.4 101,986 + -1.4 101,987 - -0.5 101,987 - +0.2 101,987 - -0.3 101,987 - -2.5 101,987 - -2.1 101,987 - -1.5 101,987 - -0.1 101,987 - +0.4 101,987 - +0.5 101,987 - -2.1 102,009 + -0.5 102,009 + -2.8 102,009 + -1.9 102,010 - +0.1 102,010 - -1.9 102,010 - -0.7 102,010 - -2.9 102,010 - -0.7 102,010 - -1.0 102,010 - -1.2 102,010 - +2.2 102,010 - -0.8 102,010 - -1.4 102,010 - +0.2 102,420 + AO353_00505 0.44 -0.4 102,421 - AO353_00505 0.44 +0.9 102,421 - AO353_00505 0.44 -1.0 102,421 - AO353_00505 0.44 +0.1 102,531 + AO353_00505 0.54 -0.4 102,531 + AO353_00505 0.54 -1.9 102,531 + AO353_00505 0.54 -0.4 102,532 - AO353_00505 0.54 -2.5 102,648 - AO353_00505 0.64 -1.2 102,703 - AO353_00505 0.68 -1.3 102,703 - AO353_00505 0.68 +0.2 102,703 - AO353_00505 0.68 +0.2 103,060 - -0.9 103,060 - +0.1 103,060 - -2.2 103,074 + -2.8 103,075 - +0.2 103,075 - -1.8 103,075 - +0.9 103,075 - -1.5 103,075 - -0.4 103,076 + -1.1 103,076 + +0.0 103,076 + -1.6 103,077 - -1.9 103,077 - +1.2 103,094 - +2.2 103,094 - -0.1 103,164 - -0.8 103,184 + +0.2 103,233 - -1.1 103,233 - -1.6 103,274 + -1.6 103,274 + -1.4 103,274 + -1.2 103,275 - -1.8 103,275 - -0.2 103,275 - -1.4 103,444 + AO353_00510 0.16 -2.4 103,479 - AO353_00510 0.17 -2.6 103,484 + AO353_00510 0.18 +0.2 103,484 + AO353_00510 0.18 -0.4 103,484 + AO353_00510 0.18 -0.6 103,484 + AO353_00510 0.18 -0.8 103,485 - AO353_00510 0.18 +0.6 103,485 - AO353_00510 0.18 -0.6 103,526 + AO353_00510 0.20 -1.1 103,527 - AO353_00510 0.20 -1.6 103,527 - AO353_00510 0.20 -1.9 103,527 - AO353_00510 0.20 -2.6 104,037 + AO353_00510 0.43 -0.8 104,038 - AO353_00510 0.43 -3.0
Or see this region's nucleotide sequence