Experiment: 1,2-Propanediol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS10825 and ABZR87_RS10830 are separated by 89 nucleotides ABZR87_RS10830 and ABZR87_RS10835 are separated by 64 nucleotides ABZR87_RS10835 and ABZR87_RS10840 are separated by 23 nucleotides
ABZR87_RS10825: ABZR87_RS10825 - CaiB/BaiF CoA-transferase family protein, at 2,293,104 to 2,294,312
_RS10825
ABZR87_RS10830: ABZR87_RS10830 - ABC transporter substrate-binding protein, at 2,294,402 to 2,295,451
_RS10830
ABZR87_RS10835: ABZR87_RS10835 - ABC transporter ATP-binding protein, at 2,295,516 to 2,296,328
_RS10835
ABZR87_RS10840: ABZR87_RS10840 - ABC transporter permease, at 2,296,352 to 2,297,143
_RS10840
Position (kb)
2294
2295
2296 Strain fitness (log2 ratio)
-1
0
1
2 at 2293.555 kb on - strand, within ABZR87_RS10825 at 2293.555 kb on - strand, within ABZR87_RS10825 at 2293.656 kb on + strand, within ABZR87_RS10825 at 2293.656 kb on + strand, within ABZR87_RS10825 at 2293.656 kb on + strand, within ABZR87_RS10825 at 2293.657 kb on - strand, within ABZR87_RS10825 at 2293.657 kb on - strand, within ABZR87_RS10825 at 2293.657 kb on - strand, within ABZR87_RS10825 at 2293.657 kb on - strand, within ABZR87_RS10825 at 2293.657 kb on - strand, within ABZR87_RS10825 at 2293.657 kb on - strand, within ABZR87_RS10825 at 2293.707 kb on + strand, within ABZR87_RS10825 at 2293.707 kb on + strand, within ABZR87_RS10825 at 2293.708 kb on - strand, within ABZR87_RS10825 at 2293.708 kb on - strand, within ABZR87_RS10825 at 2293.708 kb on - strand, within ABZR87_RS10825 at 2293.708 kb on - strand, within ABZR87_RS10825 at 2293.708 kb on - strand, within ABZR87_RS10825 at 2293.839 kb on + strand, within ABZR87_RS10825 at 2293.839 kb on + strand, within ABZR87_RS10825 at 2293.840 kb on - strand, within ABZR87_RS10825 at 2294.058 kb on + strand, within ABZR87_RS10825 at 2294.058 kb on + strand, within ABZR87_RS10825 at 2294.058 kb on + strand, within ABZR87_RS10825 at 2294.059 kb on - strand, within ABZR87_RS10825 at 2294.059 kb on - strand, within ABZR87_RS10825 at 2294.092 kb on - strand, within ABZR87_RS10825 at 2294.310 kb on + strand at 2294.311 kb on - strand at 2294.359 kb on + strand at 2294.359 kb on + strand at 2294.553 kb on - strand, within ABZR87_RS10830 at 2294.553 kb on - strand, within ABZR87_RS10830 at 2294.694 kb on - strand, within ABZR87_RS10830 at 2294.732 kb on + strand, within ABZR87_RS10830 at 2294.732 kb on + strand, within ABZR87_RS10830 at 2294.732 kb on + strand, within ABZR87_RS10830 at 2294.732 kb on + strand, within ABZR87_RS10830 at 2294.732 kb on + strand, within ABZR87_RS10830 at 2294.733 kb on - strand, within ABZR87_RS10830 at 2294.788 kb on + strand, within ABZR87_RS10830 at 2294.789 kb on - strand, within ABZR87_RS10830 at 2294.789 kb on - strand, within ABZR87_RS10830 at 2294.789 kb on - strand, within ABZR87_RS10830 at 2294.882 kb on + strand, within ABZR87_RS10830 at 2294.882 kb on + strand, within ABZR87_RS10830 at 2294.882 kb on + strand, within ABZR87_RS10830 at 2294.883 kb on - strand, within ABZR87_RS10830 at 2294.883 kb on - strand, within ABZR87_RS10830 at 2294.883 kb on - strand, within ABZR87_RS10830 at 2294.883 kb on - strand, within ABZR87_RS10830 at 2294.964 kb on + strand, within ABZR87_RS10830 at 2294.964 kb on + strand, within ABZR87_RS10830 at 2294.965 kb on - strand, within ABZR87_RS10830 at 2294.965 kb on - strand, within ABZR87_RS10830 at 2294.965 kb on - strand, within ABZR87_RS10830 at 2295.113 kb on + strand, within ABZR87_RS10830 at 2295.114 kb on - strand, within ABZR87_RS10830 at 2295.242 kb on + strand, within ABZR87_RS10830 at 2295.243 kb on - strand, within ABZR87_RS10830 at 2295.243 kb on - strand, within ABZR87_RS10830 at 2295.266 kb on + strand, within ABZR87_RS10830 at 2295.267 kb on - strand, within ABZR87_RS10830 at 2295.412 kb on + strand at 2295.412 kb on + strand at 2295.413 kb on - strand at 2295.413 kb on - strand at 2295.416 kb on - strand at 2295.416 kb on - strand at 2295.416 kb on - strand at 2295.443 kb on + strand at 2295.449 kb on + strand at 2295.449 kb on + strand at 2295.449 kb on + strand at 2295.450 kb on - strand at 2295.450 kb on - strand at 2295.450 kb on - strand at 2295.450 kb on - strand at 2295.450 kb on - strand at 2295.450 kb on - strand at 2295.588 kb on + strand at 2295.589 kb on - strand at 2295.769 kb on - strand, within ABZR87_RS10835 at 2295.769 kb on - strand, within ABZR87_RS10835 at 2295.769 kb on - strand, within ABZR87_RS10835 at 2295.769 kb on - strand, within ABZR87_RS10835 at 2295.921 kb on + strand, within ABZR87_RS10835 at 2296.302 kb on + strand at 2296.303 kb on - strand at 2296.303 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1,2-Propanediol (C) remove 2,293,555 - ABZR87_RS10825 0.37 +0.2 2,293,555 - ABZR87_RS10825 0.37 +0.2 2,293,656 + ABZR87_RS10825 0.46 -0.0 2,293,656 + ABZR87_RS10825 0.46 +0.3 2,293,656 + ABZR87_RS10825 0.46 +0.7 2,293,657 - ABZR87_RS10825 0.46 -1.1 2,293,657 - ABZR87_RS10825 0.46 +0.0 2,293,657 - ABZR87_RS10825 0.46 +0.3 2,293,657 - ABZR87_RS10825 0.46 +0.1 2,293,657 - ABZR87_RS10825 0.46 +0.2 2,293,657 - ABZR87_RS10825 0.46 +0.4 2,293,707 + ABZR87_RS10825 0.50 +0.0 2,293,707 + ABZR87_RS10825 0.50 +0.7 2,293,708 - ABZR87_RS10825 0.50 -0.7 2,293,708 - ABZR87_RS10825 0.50 -0.4 2,293,708 - ABZR87_RS10825 0.50 -0.7 2,293,708 - ABZR87_RS10825 0.50 -0.5 2,293,708 - ABZR87_RS10825 0.50 +0.0 2,293,839 + ABZR87_RS10825 0.61 -0.1 2,293,839 + ABZR87_RS10825 0.61 +0.1 2,293,840 - ABZR87_RS10825 0.61 -0.1 2,294,058 + ABZR87_RS10825 0.79 +0.2 2,294,058 + ABZR87_RS10825 0.79 -0.3 2,294,058 + ABZR87_RS10825 0.79 -0.4 2,294,059 - ABZR87_RS10825 0.79 +0.4 2,294,059 - ABZR87_RS10825 0.79 +0.1 2,294,092 - ABZR87_RS10825 0.82 -0.1 2,294,310 + -0.1 2,294,311 - +1.3 2,294,359 + -0.1 2,294,359 + +0.1 2,294,553 - ABZR87_RS10830 0.14 +0.3 2,294,553 - ABZR87_RS10830 0.14 -0.3 2,294,694 - ABZR87_RS10830 0.28 -0.4 2,294,732 + ABZR87_RS10830 0.31 -1.0 2,294,732 + ABZR87_RS10830 0.31 -0.1 2,294,732 + ABZR87_RS10830 0.31 +0.0 2,294,732 + ABZR87_RS10830 0.31 -0.9 2,294,732 + ABZR87_RS10830 0.31 -0.6 2,294,733 - ABZR87_RS10830 0.32 -0.3 2,294,788 + ABZR87_RS10830 0.37 +0.2 2,294,789 - ABZR87_RS10830 0.37 -1.5 2,294,789 - ABZR87_RS10830 0.37 -0.1 2,294,789 - ABZR87_RS10830 0.37 +0.4 2,294,882 + ABZR87_RS10830 0.46 -0.1 2,294,882 + ABZR87_RS10830 0.46 +0.5 2,294,882 + ABZR87_RS10830 0.46 +0.6 2,294,883 - ABZR87_RS10830 0.46 -0.7 2,294,883 - ABZR87_RS10830 0.46 -0.5 2,294,883 - ABZR87_RS10830 0.46 +0.6 2,294,883 - ABZR87_RS10830 0.46 +0.3 2,294,964 + ABZR87_RS10830 0.54 +2.0 2,294,964 + ABZR87_RS10830 0.54 +0.5 2,294,965 - ABZR87_RS10830 0.54 +0.3 2,294,965 - ABZR87_RS10830 0.54 +0.2 2,294,965 - ABZR87_RS10830 0.54 +1.4 2,295,113 + ABZR87_RS10830 0.68 -0.7 2,295,114 - ABZR87_RS10830 0.68 +0.2 2,295,242 + ABZR87_RS10830 0.80 -0.5 2,295,243 - ABZR87_RS10830 0.80 +0.3 2,295,243 - ABZR87_RS10830 0.80 +0.1 2,295,266 + ABZR87_RS10830 0.82 -0.4 2,295,267 - ABZR87_RS10830 0.82 -0.5 2,295,412 + +0.7 2,295,412 + -0.3 2,295,413 - +0.3 2,295,413 - +0.1 2,295,416 - -0.2 2,295,416 - +0.1 2,295,416 - +0.3 2,295,443 + +0.3 2,295,449 + +0.1 2,295,449 + +0.2 2,295,449 + -0.6 2,295,450 - +0.8 2,295,450 - +0.5 2,295,450 - +0.1 2,295,450 - -0.9 2,295,450 - +0.5 2,295,450 - +0.3 2,295,588 + -0.6 2,295,589 - +0.5 2,295,769 - ABZR87_RS10835 0.31 -0.2 2,295,769 - ABZR87_RS10835 0.31 -0.6 2,295,769 - ABZR87_RS10835 0.31 -1.3 2,295,769 - ABZR87_RS10835 0.31 +0.6 2,295,921 + ABZR87_RS10835 0.50 -0.4 2,296,302 + -0.9 2,296,303 - -0.4 2,296,303 - -0.7
Or see this region's nucleotide sequence