Experiment: 1,2-Propanediol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS08050 and ABZR87_RS08055 overlap by 4 nucleotides ABZR87_RS08055 and ABZR87_RS08060 are separated by 2 nucleotides ABZR87_RS08060 and ABZR87_RS08065 are separated by 119 nucleotides
ABZR87_RS08050: ABZR87_RS08050 - AzlC family ABC transporter permease, at 1,709,192 to 1,709,986
_RS08050
ABZR87_RS08055: ABZR87_RS08055 - AzlD domain-containing protein, at 1,709,983 to 1,710,306
_RS08055
ABZR87_RS08060: ABZR87_RS08060 - EamA family transporter RarD, at 1,710,309 to 1,711,205
_RS08060
ABZR87_RS08065: ABZR87_RS08065 - phosphoglycerate kinase, at 1,711,325 to 1,712,536
_RS08065
Position (kb)
1710
1711
1712 Strain fitness (log2 ratio)
-1
0
1 at 1709.393 kb on + strand, within ABZR87_RS08050 at 1709.393 kb on + strand, within ABZR87_RS08050 at 1709.393 kb on + strand, within ABZR87_RS08050 at 1709.394 kb on - strand, within ABZR87_RS08050 at 1709.394 kb on - strand, within ABZR87_RS08050 at 1709.639 kb on + strand, within ABZR87_RS08050 at 1709.639 kb on + strand, within ABZR87_RS08050 at 1709.639 kb on + strand, within ABZR87_RS08050 at 1709.639 kb on + strand, within ABZR87_RS08050 at 1709.640 kb on - strand, within ABZR87_RS08050 at 1709.640 kb on - strand, within ABZR87_RS08050 at 1709.640 kb on - strand, within ABZR87_RS08050 at 1709.642 kb on + strand, within ABZR87_RS08050 at 1709.642 kb on + strand, within ABZR87_RS08050 at 1709.642 kb on + strand, within ABZR87_RS08050 at 1709.643 kb on - strand, within ABZR87_RS08050 at 1709.643 kb on - strand, within ABZR87_RS08050 at 1709.643 kb on - strand, within ABZR87_RS08050 at 1709.643 kb on - strand, within ABZR87_RS08050 at 1709.643 kb on - strand, within ABZR87_RS08050 at 1710.229 kb on + strand, within ABZR87_RS08055 at 1710.229 kb on + strand, within ABZR87_RS08055 at 1710.229 kb on + strand, within ABZR87_RS08055 at 1710.229 kb on + strand, within ABZR87_RS08055 at 1710.229 kb on + strand, within ABZR87_RS08055 at 1710.229 kb on + strand, within ABZR87_RS08055 at 1710.229 kb on + strand, within ABZR87_RS08055 at 1710.230 kb on - strand, within ABZR87_RS08055 at 1710.230 kb on - strand, within ABZR87_RS08055 at 1710.230 kb on - strand, within ABZR87_RS08055 at 1710.230 kb on - strand, within ABZR87_RS08055 at 1710.354 kb on + strand at 1710.354 kb on + strand at 1710.381 kb on + strand at 1710.381 kb on + strand at 1710.382 kb on - strand at 1710.382 kb on - strand at 1710.382 kb on - strand at 1710.531 kb on + strand, within ABZR87_RS08060 at 1710.531 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.573 kb on + strand, within ABZR87_RS08060 at 1710.574 kb on - strand, within ABZR87_RS08060 at 1710.574 kb on - strand, within ABZR87_RS08060 at 1710.574 kb on - strand, within ABZR87_RS08060 at 1710.574 kb on - strand, within ABZR87_RS08060 at 1710.795 kb on + strand, within ABZR87_RS08060 at 1710.795 kb on + strand, within ABZR87_RS08060 at 1710.796 kb on - strand, within ABZR87_RS08060 at 1710.796 kb on - strand, within ABZR87_RS08060 at 1710.882 kb on + strand, within ABZR87_RS08060 at 1710.882 kb on + strand, within ABZR87_RS08060 at 1710.882 kb on + strand, within ABZR87_RS08060 at 1710.883 kb on - strand, within ABZR87_RS08060 at 1711.013 kb on + strand, within ABZR87_RS08060 at 1711.013 kb on + strand, within ABZR87_RS08060 at 1711.044 kb on + strand, within ABZR87_RS08060 at 1711.044 kb on + strand, within ABZR87_RS08060 at 1711.044 kb on + strand, within ABZR87_RS08060 at 1711.044 kb on + strand, within ABZR87_RS08060 at 1711.044 kb on + strand, within ABZR87_RS08060 at 1711.045 kb on - strand, within ABZR87_RS08060 at 1711.045 kb on - strand, within ABZR87_RS08060 at 1711.045 kb on - strand, within ABZR87_RS08060 at 1711.045 kb on - strand, within ABZR87_RS08060 at 1711.045 kb on - strand, within ABZR87_RS08060 at 1711.086 kb on + strand, within ABZR87_RS08060 at 1711.086 kb on + strand, within ABZR87_RS08060 at 1711.086 kb on + strand, within ABZR87_RS08060 at 1711.086 kb on + strand, within ABZR87_RS08060 at 1711.087 kb on - strand, within ABZR87_RS08060 at 1711.087 kb on - strand, within ABZR87_RS08060 at 1711.089 kb on - strand, within ABZR87_RS08060 at 1711.089 kb on - strand, within ABZR87_RS08060 at 1711.122 kb on + strand at 1711.123 kb on - strand at 1711.123 kb on - strand at 1711.123 kb on - strand at 1711.153 kb on - strand at 1711.153 kb on - strand at 1711.204 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1,2-Propanediol (C) remove 1,709,393 + ABZR87_RS08050 0.25 +0.2 1,709,393 + ABZR87_RS08050 0.25 +0.6 1,709,393 + ABZR87_RS08050 0.25 -0.1 1,709,394 - ABZR87_RS08050 0.25 -0.0 1,709,394 - ABZR87_RS08050 0.25 +0.5 1,709,639 + ABZR87_RS08050 0.56 +0.7 1,709,639 + ABZR87_RS08050 0.56 -0.9 1,709,639 + ABZR87_RS08050 0.56 -0.7 1,709,639 + ABZR87_RS08050 0.56 +0.1 1,709,640 - ABZR87_RS08050 0.56 +0.2 1,709,640 - ABZR87_RS08050 0.56 +0.4 1,709,640 - ABZR87_RS08050 0.56 -0.4 1,709,642 + ABZR87_RS08050 0.57 -0.2 1,709,642 + ABZR87_RS08050 0.57 -0.2 1,709,642 + ABZR87_RS08050 0.57 -0.5 1,709,643 - ABZR87_RS08050 0.57 -0.6 1,709,643 - ABZR87_RS08050 0.57 -0.9 1,709,643 - ABZR87_RS08050 0.57 -0.1 1,709,643 - ABZR87_RS08050 0.57 +0.1 1,709,643 - ABZR87_RS08050 0.57 +0.4 1,710,229 + ABZR87_RS08055 0.76 +1.1 1,710,229 + ABZR87_RS08055 0.76 +0.0 1,710,229 + ABZR87_RS08055 0.76 -0.1 1,710,229 + ABZR87_RS08055 0.76 -1.1 1,710,229 + ABZR87_RS08055 0.76 +0.2 1,710,229 + ABZR87_RS08055 0.76 -0.5 1,710,229 + ABZR87_RS08055 0.76 -0.9 1,710,230 - ABZR87_RS08055 0.76 +0.5 1,710,230 - ABZR87_RS08055 0.76 +0.4 1,710,230 - ABZR87_RS08055 0.76 -0.7 1,710,230 - ABZR87_RS08055 0.76 +0.3 1,710,354 + +0.1 1,710,354 + +1.2 1,710,381 + +0.0 1,710,381 + +0.3 1,710,382 - -0.1 1,710,382 - +0.3 1,710,382 - +0.6 1,710,531 + ABZR87_RS08060 0.25 +0.5 1,710,531 + ABZR87_RS08060 0.25 -0.2 1,710,573 + ABZR87_RS08060 0.29 +1.1 1,710,573 + ABZR87_RS08060 0.29 -0.7 1,710,573 + ABZR87_RS08060 0.29 -0.0 1,710,573 + ABZR87_RS08060 0.29 +0.9 1,710,573 + ABZR87_RS08060 0.29 -0.2 1,710,573 + ABZR87_RS08060 0.29 -0.9 1,710,573 + ABZR87_RS08060 0.29 +0.5 1,710,573 + ABZR87_RS08060 0.29 -0.5 1,710,573 + ABZR87_RS08060 0.29 -0.3 1,710,573 + ABZR87_RS08060 0.29 -0.7 1,710,573 + ABZR87_RS08060 0.29 +0.0 1,710,574 - ABZR87_RS08060 0.30 -0.4 1,710,574 - ABZR87_RS08060 0.30 -0.6 1,710,574 - ABZR87_RS08060 0.30 -0.7 1,710,574 - ABZR87_RS08060 0.30 +0.4 1,710,795 + ABZR87_RS08060 0.54 -0.4 1,710,795 + ABZR87_RS08060 0.54 +0.0 1,710,796 - ABZR87_RS08060 0.54 -0.0 1,710,796 - ABZR87_RS08060 0.54 -0.5 1,710,882 + ABZR87_RS08060 0.64 +1.1 1,710,882 + ABZR87_RS08060 0.64 +0.4 1,710,882 + ABZR87_RS08060 0.64 +0.5 1,710,883 - ABZR87_RS08060 0.64 +0.7 1,711,013 + ABZR87_RS08060 0.78 -0.6 1,711,013 + ABZR87_RS08060 0.78 +0.5 1,711,044 + ABZR87_RS08060 0.82 -0.1 1,711,044 + ABZR87_RS08060 0.82 +0.5 1,711,044 + ABZR87_RS08060 0.82 +0.5 1,711,044 + ABZR87_RS08060 0.82 +0.3 1,711,044 + ABZR87_RS08060 0.82 -0.5 1,711,045 - ABZR87_RS08060 0.82 +0.3 1,711,045 - ABZR87_RS08060 0.82 -0.5 1,711,045 - ABZR87_RS08060 0.82 +0.7 1,711,045 - ABZR87_RS08060 0.82 +0.5 1,711,045 - ABZR87_RS08060 0.82 -0.8 1,711,086 + ABZR87_RS08060 0.87 -0.6 1,711,086 + ABZR87_RS08060 0.87 +0.6 1,711,086 + ABZR87_RS08060 0.87 -0.0 1,711,086 + ABZR87_RS08060 0.87 +0.5 1,711,087 - ABZR87_RS08060 0.87 -0.9 1,711,087 - ABZR87_RS08060 0.87 +1.1 1,711,089 - ABZR87_RS08060 0.87 +1.7 1,711,089 - ABZR87_RS08060 0.87 +0.3 1,711,122 + -0.5 1,711,123 - -0.3 1,711,123 - +0.2 1,711,123 - +0.6 1,711,153 - -0.1 1,711,153 - +0.7 1,711,204 - +0.2
Or see this region's nucleotide sequence