Experiment: 1,2-Propanediol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS07555 and ABZR87_RS07565 are separated by 356 nucleotides ABZR87_RS07565 and ABZR87_RS07570 are separated by 700 nucleotides
ABZR87_RS07555: ABZR87_RS07555 - DUF3025 domain-containing protein, at 1,604,805 to 1,605,605
_RS07555
ABZR87_RS07565: ABZR87_RS07565 - OsmC family protein, at 1,605,962 to 1,606,408
_RS07565
ABZR87_RS07570: ABZR87_RS07570 - 50S ribosomal protein L13, at 1,607,109 to 1,607,537
_RS07570
Position (kb)
1605
1606
1607 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1605.013 kb on - strand, within ABZR87_RS07555 at 1605.363 kb on + strand, within ABZR87_RS07555 at 1605.363 kb on + strand, within ABZR87_RS07555 at 1605.363 kb on + strand, within ABZR87_RS07555 at 1605.363 kb on + strand, within ABZR87_RS07555 at 1605.364 kb on - strand, within ABZR87_RS07555 at 1605.364 kb on - strand, within ABZR87_RS07555 at 1605.364 kb on - strand, within ABZR87_RS07555 at 1605.546 kb on + strand at 1605.546 kb on + strand at 1605.547 kb on - strand at 1605.547 kb on - strand at 1605.547 kb on - strand at 1605.547 kb on - strand at 1605.547 kb on - strand at 1605.590 kb on - strand at 1605.603 kb on + strand at 1605.603 kb on + strand at 1605.603 kb on + strand at 1605.603 kb on + strand at 1605.603 kb on + strand at 1605.603 kb on + strand at 1605.603 kb on + strand at 1605.604 kb on - strand at 1605.604 kb on - strand at 1605.964 kb on - strand at 1606.056 kb on + strand, within ABZR87_RS07565 at 1606.056 kb on + strand, within ABZR87_RS07565 at 1606.056 kb on + strand, within ABZR87_RS07565 at 1606.056 kb on + strand, within ABZR87_RS07565 at 1606.056 kb on + strand, within ABZR87_RS07565 at 1606.057 kb on - strand, within ABZR87_RS07565 at 1606.057 kb on - strand, within ABZR87_RS07565 at 1606.057 kb on - strand, within ABZR87_RS07565 at 1606.057 kb on - strand, within ABZR87_RS07565 at 1606.202 kb on + strand, within ABZR87_RS07565 at 1606.202 kb on + strand, within ABZR87_RS07565 at 1606.202 kb on + strand, within ABZR87_RS07565 at 1606.202 kb on + strand, within ABZR87_RS07565 at 1606.202 kb on + strand, within ABZR87_RS07565 at 1606.202 kb on + strand, within ABZR87_RS07565 at 1606.202 kb on + strand, within ABZR87_RS07565 at 1606.203 kb on - strand, within ABZR87_RS07565 at 1606.203 kb on - strand, within ABZR87_RS07565 at 1606.242 kb on + strand, within ABZR87_RS07565 at 1606.243 kb on - strand, within ABZR87_RS07565 at 1606.459 kb on + strand at 1606.460 kb on - strand at 1606.460 kb on - strand at 1606.460 kb on - strand at 1606.460 kb on - strand at 1606.490 kb on + strand at 1606.490 kb on + strand at 1606.491 kb on - strand at 1606.583 kb on + strand at 1606.624 kb on - strand at 1606.733 kb on + strand at 1606.733 kb on + strand at 1606.733 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1,2-Propanediol (C) remove 1,605,013 - ABZR87_RS07555 0.26 -0.2 1,605,363 + ABZR87_RS07555 0.70 +0.1 1,605,363 + ABZR87_RS07555 0.70 -0.3 1,605,363 + ABZR87_RS07555 0.70 +1.4 1,605,363 + ABZR87_RS07555 0.70 -0.3 1,605,364 - ABZR87_RS07555 0.70 +0.3 1,605,364 - ABZR87_RS07555 0.70 +0.1 1,605,364 - ABZR87_RS07555 0.70 +0.2 1,605,546 + -0.3 1,605,546 + -0.1 1,605,547 - -0.3 1,605,547 - +0.4 1,605,547 - +0.7 1,605,547 - -0.2 1,605,547 - +0.4 1,605,590 - +3.4 1,605,603 + +0.3 1,605,603 + -0.3 1,605,603 + +0.6 1,605,603 + +1.6 1,605,603 + -0.1 1,605,603 + -0.0 1,605,603 + +0.9 1,605,604 - -0.1 1,605,604 - -0.1 1,605,964 - +0.8 1,606,056 + ABZR87_RS07565 0.21 -0.1 1,606,056 + ABZR87_RS07565 0.21 -0.7 1,606,056 + ABZR87_RS07565 0.21 -0.7 1,606,056 + ABZR87_RS07565 0.21 -1.9 1,606,056 + ABZR87_RS07565 0.21 -0.9 1,606,057 - ABZR87_RS07565 0.21 -0.4 1,606,057 - ABZR87_RS07565 0.21 -1.4 1,606,057 - ABZR87_RS07565 0.21 -0.3 1,606,057 - ABZR87_RS07565 0.21 +0.1 1,606,202 + ABZR87_RS07565 0.54 -0.9 1,606,202 + ABZR87_RS07565 0.54 -0.2 1,606,202 + ABZR87_RS07565 0.54 -0.6 1,606,202 + ABZR87_RS07565 0.54 -1.3 1,606,202 + ABZR87_RS07565 0.54 -2.2 1,606,202 + ABZR87_RS07565 0.54 -0.4 1,606,202 + ABZR87_RS07565 0.54 -0.4 1,606,203 - ABZR87_RS07565 0.54 -0.5 1,606,203 - ABZR87_RS07565 0.54 -0.5 1,606,242 + ABZR87_RS07565 0.63 -2.0 1,606,243 - ABZR87_RS07565 0.63 -0.4 1,606,459 + -0.3 1,606,460 - +0.1 1,606,460 - -0.5 1,606,460 - +0.1 1,606,460 - +0.3 1,606,490 + +0.3 1,606,490 + +0.1 1,606,491 - -0.1 1,606,583 + +0.2 1,606,624 - +0.1 1,606,733 + +0.8 1,606,733 + +0.3 1,606,733 + -0.3
Or see this region's nucleotide sequence