Experiment: 1,2-Propanediol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00270 and ABZR87_RS00275 are separated by 1 nucleotides ABZR87_RS00275 and ABZR87_RS00280 are separated by 79 nucleotides
ABZR87_RS00270: ABZR87_RS00270 - sensor domain-containing diguanylate cyclase, at 54,328 to 55,992
_RS00270
ABZR87_RS00275: ABZR87_RS00275 - NAD-dependent epimerase/dehydratase family protein, at 55,994 to 56,995
_RS00275
ABZR87_RS00280: ABZR87_RS00280 - CDP-6-deoxy-delta-3,4-glucoseen reductase, at 57,075 to 58,124
_RS00280
Position (kb) 55
56
57 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 55.090 kb on - strand, within ABZR87_RS00270 at 55.090 kb on - strand, within ABZR87_RS00270 at 55.090 kb on - strand, within ABZR87_RS00270 at 55.152 kb on - strand, within ABZR87_RS00270 at 55.181 kb on + strand, within ABZR87_RS00270 at 55.190 kb on + strand, within ABZR87_RS00270 at 55.190 kb on + strand, within ABZR87_RS00270 at 55.190 kb on + strand, within ABZR87_RS00270 at 55.190 kb on + strand, within ABZR87_RS00270 at 55.367 kb on + strand, within ABZR87_RS00270 at 55.383 kb on - strand, within ABZR87_RS00270 at 55.383 kb on - strand, within ABZR87_RS00270 at 55.383 kb on - strand, within ABZR87_RS00270 at 55.383 kb on - strand, within ABZR87_RS00270 at 55.473 kb on + strand, within ABZR87_RS00270 at 55.473 kb on + strand, within ABZR87_RS00270 at 55.473 kb on + strand, within ABZR87_RS00270 at 55.474 kb on - strand, within ABZR87_RS00270 at 55.474 kb on - strand, within ABZR87_RS00270 at 55.475 kb on + strand, within ABZR87_RS00270 at 55.475 kb on + strand, within ABZR87_RS00270 at 55.475 kb on + strand, within ABZR87_RS00270 at 55.475 kb on + strand, within ABZR87_RS00270 at 55.475 kb on + strand, within ABZR87_RS00270 at 55.476 kb on - strand, within ABZR87_RS00270 at 55.476 kb on - strand, within ABZR87_RS00270 at 55.476 kb on - strand, within ABZR87_RS00270 at 55.544 kb on + strand, within ABZR87_RS00270 at 55.544 kb on + strand, within ABZR87_RS00270 at 55.544 kb on + strand, within ABZR87_RS00270 at 55.544 kb on + strand, within ABZR87_RS00270 at 55.544 kb on + strand, within ABZR87_RS00270 at 55.545 kb on - strand, within ABZR87_RS00270 at 55.545 kb on - strand, within ABZR87_RS00270 at 55.571 kb on + strand, within ABZR87_RS00270 at 55.571 kb on + strand, within ABZR87_RS00270 at 55.571 kb on + strand, within ABZR87_RS00270 at 55.571 kb on + strand, within ABZR87_RS00270 at 55.572 kb on - strand, within ABZR87_RS00270 at 56.193 kb on + strand, within ABZR87_RS00275 at 56.310 kb on + strand, within ABZR87_RS00275 at 56.310 kb on + strand, within ABZR87_RS00275 at 56.311 kb on - strand, within ABZR87_RS00275 at 56.311 kb on - strand, within ABZR87_RS00275 at 56.311 kb on - strand, within ABZR87_RS00275 at 56.382 kb on + strand, within ABZR87_RS00275 at 56.382 kb on + strand, within ABZR87_RS00275 at 56.382 kb on + strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.383 kb on - strand, within ABZR87_RS00275 at 56.510 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.535 kb on + strand, within ABZR87_RS00275 at 56.536 kb on - strand, within ABZR87_RS00275 at 56.536 kb on - strand, within ABZR87_RS00275 at 56.556 kb on + strand, within ABZR87_RS00275 at 56.556 kb on + strand, within ABZR87_RS00275 at 56.556 kb on + strand, within ABZR87_RS00275 at 56.557 kb on - strand, within ABZR87_RS00275 at 56.680 kb on + strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 56.681 kb on - strand, within ABZR87_RS00275 at 57.061 kb on + strand at 57.062 kb on - strand at 57.062 kb on - strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.072 kb on + strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.073 kb on - strand at 57.081 kb on + strand at 57.081 kb on + strand at 57.178 kb on - strand at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.462 kb on - strand, within ABZR87_RS00280 at 57.483 kb on + strand, within ABZR87_RS00280 at 57.483 kb on + strand, within ABZR87_RS00280 at 57.484 kb on - strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.522 kb on + strand, within ABZR87_RS00280 at 57.523 kb on - strand, within ABZR87_RS00280 at 57.523 kb on - strand, within ABZR87_RS00280 at 57.596 kb on + strand, within ABZR87_RS00280 at 57.603 kb on + strand, within ABZR87_RS00280 at 57.603 kb on + strand, within ABZR87_RS00280 at 57.604 kb on - strand, within ABZR87_RS00280 at 57.804 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.834 kb on + strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.835 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.886 kb on - strand, within ABZR87_RS00280 at 57.970 kb on - strand, within ABZR87_RS00280
Per-strain Table
Position Strand Gene LocusTag Fraction 1,2-Propanediol (C) remove 55,090 - ABZR87_RS00270 0.46 -0.2 55,090 - ABZR87_RS00270 0.46 +0.0 55,090 - ABZR87_RS00270 0.46 +1.6 55,152 - ABZR87_RS00270 0.49 -0.4 55,181 + ABZR87_RS00270 0.51 -0.6 55,190 + ABZR87_RS00270 0.52 +0.7 55,190 + ABZR87_RS00270 0.52 +1.4 55,190 + ABZR87_RS00270 0.52 +0.3 55,190 + ABZR87_RS00270 0.52 +0.5 55,367 + ABZR87_RS00270 0.62 +0.6 55,383 - ABZR87_RS00270 0.63 +0.1 55,383 - ABZR87_RS00270 0.63 +0.1 55,383 - ABZR87_RS00270 0.63 -0.4 55,383 - ABZR87_RS00270 0.63 -0.9 55,473 + ABZR87_RS00270 0.69 -2.4 55,473 + ABZR87_RS00270 0.69 -0.5 55,473 + ABZR87_RS00270 0.69 +0.4 55,474 - ABZR87_RS00270 0.69 -0.1 55,474 - ABZR87_RS00270 0.69 +0.5 55,475 + ABZR87_RS00270 0.69 -0.0 55,475 + ABZR87_RS00270 0.69 -0.3 55,475 + ABZR87_RS00270 0.69 +0.2 55,475 + ABZR87_RS00270 0.69 +0.2 55,475 + ABZR87_RS00270 0.69 +0.4 55,476 - ABZR87_RS00270 0.69 +0.3 55,476 - ABZR87_RS00270 0.69 +1.1 55,476 - ABZR87_RS00270 0.69 +0.0 55,544 + ABZR87_RS00270 0.73 +0.6 55,544 + ABZR87_RS00270 0.73 -0.7 55,544 + ABZR87_RS00270 0.73 -0.3 55,544 + ABZR87_RS00270 0.73 +0.6 55,544 + ABZR87_RS00270 0.73 -0.0 55,545 - ABZR87_RS00270 0.73 -0.5 55,545 - ABZR87_RS00270 0.73 +0.3 55,571 + ABZR87_RS00270 0.75 +0.3 55,571 + ABZR87_RS00270 0.75 +0.7 55,571 + ABZR87_RS00270 0.75 +0.1 55,571 + ABZR87_RS00270 0.75 -0.0 55,572 - ABZR87_RS00270 0.75 -0.4 56,193 + ABZR87_RS00275 0.20 -1.5 56,310 + ABZR87_RS00275 0.32 -0.2 56,310 + ABZR87_RS00275 0.32 -1.0 56,311 - ABZR87_RS00275 0.32 -1.0 56,311 - ABZR87_RS00275 0.32 -1.8 56,311 - ABZR87_RS00275 0.32 -0.6 56,382 + ABZR87_RS00275 0.39 -1.6 56,382 + ABZR87_RS00275 0.39 -0.6 56,382 + ABZR87_RS00275 0.39 -1.0 56,383 - ABZR87_RS00275 0.39 -1.7 56,383 - ABZR87_RS00275 0.39 -0.2 56,383 - ABZR87_RS00275 0.39 -2.7 56,383 - ABZR87_RS00275 0.39 -1.4 56,510 + ABZR87_RS00275 0.51 -1.1 56,535 + ABZR87_RS00275 0.54 -2.8 56,535 + ABZR87_RS00275 0.54 +1.8 56,535 + ABZR87_RS00275 0.54 -0.3 56,535 + ABZR87_RS00275 0.54 -2.6 56,536 - ABZR87_RS00275 0.54 -2.1 56,536 - ABZR87_RS00275 0.54 -0.5 56,556 + ABZR87_RS00275 0.56 -2.6 56,556 + ABZR87_RS00275 0.56 -0.3 56,556 + ABZR87_RS00275 0.56 -1.1 56,557 - ABZR87_RS00275 0.56 -1.2 56,680 + ABZR87_RS00275 0.68 -2.7 56,681 - ABZR87_RS00275 0.69 -0.6 56,681 - ABZR87_RS00275 0.69 -2.2 56,681 - ABZR87_RS00275 0.69 -1.1 56,681 - ABZR87_RS00275 0.69 -1.4 57,061 + -0.7 57,062 - -0.3 57,062 - +0.8 57,072 + +0.1 57,072 + +0.4 57,072 + +0.2 57,072 + +0.4 57,072 + +0.3 57,072 + +0.4 57,072 + -0.1 57,072 + +0.3 57,073 - -0.5 57,073 - +0.4 57,073 - -1.4 57,073 - +1.5 57,073 - +0.6 57,081 + +0.3 57,081 + +0.3 57,178 - +0.6 57,462 - ABZR87_RS00280 0.37 -0.2 57,462 - ABZR87_RS00280 0.37 -0.2 57,462 - ABZR87_RS00280 0.37 +0.3 57,462 - ABZR87_RS00280 0.37 +0.4 57,483 + ABZR87_RS00280 0.39 +0.4 57,483 + ABZR87_RS00280 0.39 +0.3 57,484 - ABZR87_RS00280 0.39 +0.8 57,522 + ABZR87_RS00280 0.43 +0.7 57,522 + ABZR87_RS00280 0.43 +0.1 57,522 + ABZR87_RS00280 0.43 +0.7 57,523 - ABZR87_RS00280 0.43 -0.4 57,523 - ABZR87_RS00280 0.43 -0.1 57,596 + ABZR87_RS00280 0.50 +0.8 57,603 + ABZR87_RS00280 0.50 -0.7 57,603 + ABZR87_RS00280 0.50 -0.3 57,604 - ABZR87_RS00280 0.50 +0.1 57,804 + ABZR87_RS00280 0.69 +0.5 57,834 + ABZR87_RS00280 0.72 +0.5 57,834 + ABZR87_RS00280 0.72 +0.2 57,834 + ABZR87_RS00280 0.72 -1.3 57,834 + ABZR87_RS00280 0.72 -1.3 57,834 + ABZR87_RS00280 0.72 -0.1 57,834 + ABZR87_RS00280 0.72 -0.2 57,834 + ABZR87_RS00280 0.72 -0.3 57,834 + ABZR87_RS00280 0.72 +0.5 57,834 + ABZR87_RS00280 0.72 -0.8 57,834 + ABZR87_RS00280 0.72 +0.4 57,834 + ABZR87_RS00280 0.72 +0.2 57,835 - ABZR87_RS00280 0.72 +0.1 57,835 - ABZR87_RS00280 0.72 -0.3 57,835 - ABZR87_RS00280 0.72 +0.4 57,835 - ABZR87_RS00280 0.72 +1.8 57,835 - ABZR87_RS00280 0.72 -1.2 57,835 - ABZR87_RS00280 0.72 +0.3 57,886 - ABZR87_RS00280 0.77 +0.5 57,886 - ABZR87_RS00280 0.77 +0.2 57,886 - ABZR87_RS00280 0.77 -0.5 57,970 - ABZR87_RS00280 0.85 -0.7
Or see this region's nucleotide sequence