Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4078

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
4,900,317	-				-0.1
4,900,379	+				-0.7
4,900,486	-				+0.4
4,900,486	-				+1.5
4,900,486	-				+7.1
4,900,517	+		Shewana3_4077	0.13	-0.2
4,900,704	+		Shewana3_4077	0.35	+1.4
4,900,915	+		Shewana3_4077	0.61	+1.2
4,900,915	+		Shewana3_4077	0.61	+2.4
4,900,921	+		Shewana3_4077	0.62	+0.8
4,900,937	+		Shewana3_4077	0.64	+0.6
4,900,945	-		Shewana3_4077	0.65	+1.1
4,900,945	-		Shewana3_4077	0.65	-1.0
4,900,946	-		Shewana3_4077	0.65	+0.7
4,900,956	-		Shewana3_4077	0.66	+0.3
4,900,958	-		Shewana3_4077	0.66	+0.2
4,900,981	+		Shewana3_4077	0.69	+0.4
4,900,981	+		Shewana3_4077	0.69	+1.0
4,900,981	+		Shewana3_4077	0.69	+0.6
4,900,982	+		Shewana3_4077	0.69	+0.5
4,900,983	+		Shewana3_4077	0.69	+3.2
4,901,032	+		Shewana3_4077	0.75	+0.5
4,901,212	+				+0.3
4,901,212	+				+0.3
4,901,220	-				+0.4
4,901,277	+				+1.0
4,901,277	+				+1.0
4,901,346	+		Shewana3_4078	0.16	+0.6
4,901,354	+		Shewana3_4078	0.17	+2.9
4,901,354	+		Shewana3_4078	0.17	+0.4
4,901,354	+		Shewana3_4078	0.17	+0.9
4,901,371	-		Shewana3_4078	0.19	-0.4
4,901,371	-		Shewana3_4078	0.19	+1.5
4,901,371	-		Shewana3_4078	0.19	+1.2
4,901,378	+		Shewana3_4078	0.20	+0.5
4,901,438	+		Shewana3_4078	0.29	+0.6
4,901,488	-		Shewana3_4078	0.36	-0.2
4,901,592	-		Shewana3_4078	0.51	+1.2
4,901,599	+		Shewana3_4078	0.52	-0.5
4,901,642	+		Shewana3_4078	0.58	-0.3
4,901,653	+		Shewana3_4078	0.59	+0.9
4,901,675	-		Shewana3_4078	0.62	-0.1
4,901,675	-		Shewana3_4078	0.62	+0.8
4,901,730	-		Shewana3_4078	0.70	-0.2
4,901,753	+		Shewana3_4078	0.73	+0.8
4,901,753	+		Shewana3_4078	0.73	-0.4
4,901,753	+		Shewana3_4078	0.73	+0.4
4,901,753	+		Shewana3_4078	0.73	+0.6
4,901,761	-		Shewana3_4078	0.75	+0.3
4,901,761	-		Shewana3_4078	0.75	-0.3
4,901,858	+		Shewana3_4078	0.88	+0.3
4,901,949	-				+0.7
4,901,984	+				-0.3
4,901,992	-				+0.2
4,902,017	+		Shewana3_4079	0.10	+1.0
4,902,017	+		Shewana3_4079	0.10	+0.5
4,902,017	+		Shewana3_4079	0.10	+0.6
4,902,025	-		Shewana3_4079	0.11	+1.1
4,902,025	-		Shewana3_4079	0.11	+0.7
4,902,025	-		Shewana3_4079	0.11	+1.0
4,902,025	-		Shewana3_4079	0.11	+0.6
4,902,025	-		Shewana3_4079	0.11	+1.1
4,902,025	-		Shewana3_4079	0.11	+0.2
4,902,025	-		Shewana3_4079	0.11	+0.4
4,902,133	-		Shewana3_4079	0.27	-0.1
4,902,232	-		Shewana3_4079	0.41	+0.6
4,902,233	+		Shewana3_4079	0.41	+3.5
4,902,368	+		Shewana3_4079	0.60	+1.1
4,902,637	-				-2.0
4,902,776	+		Shewana3_4080	0.24	+1.4
4,902,776	+		Shewana3_4080	0.24	+0.3
4,902,830	-		Shewana3_4080	0.33	+0.6
4,902,840	-		Shewana3_4080	0.35	+0.5
4,902,861	+		Shewana3_4080	0.38	+0.5