Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4030
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,842,603 | + | +0.4 | |||
4,842,697 | - | +0.7 | |||
4,842,702 | - | +0.9 | |||
4,842,789 | + | +0.1 | |||
4,842,986 | - | +5.5 | |||
4,843,558 | - | +4.1 | |||
4,843,764 | + | Shewana3_4030 | 0.70 | +3.2 | |
4,843,782 | - | Shewana3_4030 | 0.76 | +4.5 | |
4,843,964 | - | +2.2 | |||
4,843,984 | + | +2.9 | |||
4,844,009 | + | +4.4 | |||
4,844,009 | + | +4.6 | |||
4,844,024 | + | +4.7 | |||
4,844,031 | - | +5.7 | |||
4,844,032 | - | +4.2 | |||
4,844,172 | + | Shewana3_4031 | 0.12 | +3.4 | |
4,844,204 | + | Shewana3_4031 | 0.15 | +2.0 | |
4,844,403 | + | Shewana3_4031 | 0.34 | +3.6 | |
4,844,768 | + | Shewana3_4031 | 0.70 | +0.1 | |
4,844,776 | - | Shewana3_4031 | 0.71 | +4.5 | |
4,844,786 | + | Shewana3_4031 | 0.72 | +2.8 |
Or see this region's nucleotide sequence