Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4019

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
4,828,006	+	envZ	Shewana3_4018	0.42	+0.8
4,828,014	-	envZ	Shewana3_4018	0.43	-0.1
4,828,107	-	envZ	Shewana3_4018	0.50	-0.9
4,828,136	-	envZ	Shewana3_4018	0.52	-0.9
4,828,330	-	envZ	Shewana3_4018	0.67	-1.3
4,828,381	+	envZ	Shewana3_4018	0.71	-0.4
4,828,389	-	envZ	Shewana3_4018	0.71	-0.4
4,828,389	-	envZ	Shewana3_4018	0.71	-0.7
4,828,655	+				-0.9
4,828,655	+				-1.2
4,828,663	-				-1.5
4,828,835	+				-0.0
4,828,944	+				+1.1
4,828,962	+				-0.5
4,829,118	+		Shewana3_4019	0.12	-0.1
4,829,146	-		Shewana3_4019	0.13	-1.0
4,829,257	-		Shewana3_4019	0.19	-0.8
4,829,257	-		Shewana3_4019	0.19	+1.2
4,829,260	+		Shewana3_4019	0.19	+1.2
4,829,570	+		Shewana3_4019	0.35	+0.5
4,829,588	-		Shewana3_4019	0.36	-0.0
4,829,837	+		Shewana3_4019	0.48	-1.3
4,829,863	+		Shewana3_4019	0.49	-0.6
4,830,055	-		Shewana3_4019	0.59	-0.9
4,830,055	-		Shewana3_4019	0.59	+1.5
4,830,069	+		Shewana3_4019	0.60	-1.1
4,830,071	+		Shewana3_4019	0.60	-0.5
4,830,071	+		Shewana3_4019	0.60	-0.2
4,830,134	-		Shewana3_4019	0.63	-1.4
4,830,265	-		Shewana3_4019	0.70	+5.9
4,830,320	-		Shewana3_4019	0.73	+0.2
4,830,479	+		Shewana3_4019	0.81	+0.8
4,830,479	+		Shewana3_4019	0.81	-0.2
4,830,736	-				+0.0
4,830,764	+				+0.1
4,830,802	-				+0.3
4,830,826	+				+0.5
4,830,949	-				-0.4
4,830,993	-		Shewana3_4020	0.16	-1.4
4,831,270	-		Shewana3_4020	0.75	-2.1
4,831,383	-				-0.7
4,831,407	-				-0.5
4,831,430	-				-0.5
4,831,430	-				-0.2
4,831,523	-				-0.7
4,831,564	-				+1.2
4,831,600	+				+1.7
4,831,658	+		Shewana3_4021	0.20	+0.4
4,831,660	+		Shewana3_4021	0.21	-0.3
4,831,666	-		Shewana3_4021	0.22	-0.7
4,831,668	-		Shewana3_4021	0.23	+0.1
4,831,674	-		Shewana3_4021	0.25	+1.0
4,831,732	-		Shewana3_4021	0.41	+1.0
4,831,773	+		Shewana3_4021	0.53	-0.3
4,831,780	-		Shewana3_4021	0.55	+0.7
4,831,781	-		Shewana3_4021	0.55	+2.4
4,831,791	-		Shewana3_4021	0.58	-0.6