Strain Fitness in Shewanella sp. ANA-3 around Shewana3_4014
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,818,987 | - | Shewana3_4013 | 0.65 | +1.2 | |
4,818,987 | - | Shewana3_4013 | 0.65 | +2.8 | |
4,818,989 | - | Shewana3_4013 | 0.65 | +0.1 | |
4,818,992 | + | Shewana3_4013 | 0.65 | +0.2 | |
4,819,000 | - | Shewana3_4013 | 0.66 | -0.1 | |
4,819,056 | + | Shewana3_4013 | 0.68 | -0.4 | |
4,819,056 | + | Shewana3_4013 | 0.68 | +0.9 | |
4,819,064 | - | Shewana3_4013 | 0.69 | +0.4 | |
4,819,235 | + | Shewana3_4013 | 0.76 | +0.2 | |
4,819,253 | - | Shewana3_4013 | 0.77 | -1.0 | |
4,819,488 | - | Shewana3_4013 | 0.87 | +0.0 | |
4,819,621 | - | +0.6 | |||
4,819,632 | + | +1.6 | |||
4,819,658 | + | +0.1 | |||
4,819,679 | + | +0.6 | |||
4,819,706 | + | +0.1 | |||
4,819,928 | - | +2.2 | |||
4,820,024 | + | Shewana3_4014 | 0.19 | +0.1 | |
4,820,054 | - | Shewana3_4014 | 0.25 | +0.6 | |
4,820,583 | + | +0.4 | |||
4,820,693 | + | Shewana3_4015 | 0.21 | +0.1 | |
4,820,725 | - | Shewana3_4015 | 0.25 | -0.0 | |
4,820,735 | - | Shewana3_4015 | 0.26 | +0.2 | |
4,821,155 | + | Shewana3_4015 | 0.70 | -0.1 | |
4,821,303 | - | Shewana3_4015 | 0.86 | -0.6 |
Or see this region's nucleotide sequence