Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3952

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
4,750,378	+		Shewana3_3950	0.88	+0.8
4,750,452	+				-1.5
4,750,457	+				-0.3
4,750,465	-				-0.1
4,750,468	+				-0.4
4,750,476	-				+0.1
4,750,584	+				+1.0
4,750,620	+				+0.2
4,751,182	+		Shewana3_3951	0.45	-0.2
4,751,190	-		Shewana3_3951	0.47	-0.0
4,751,319	+		Shewana3_3951	0.86	+0.2
4,751,338	+				+0.3
4,751,361	+				-0.4
4,751,528	-		Shewana3_3952	0.11	+0.2
4,751,764	+		Shewana3_3952	0.27	+1.1
4,751,811	+		Shewana3_3952	0.30	-0.2
4,751,821	+		Shewana3_3952	0.31	+1.5
4,751,821	+		Shewana3_3952	0.31	-2.7
4,751,925	+		Shewana3_3952	0.38	-2.2
4,752,084	+		Shewana3_3952	0.49	-2.8
4,752,094	+		Shewana3_3952	0.50	-2.3
4,752,118	-		Shewana3_3952	0.51	-1.9
4,752,123	-		Shewana3_3952	0.52	-1.6
4,752,249	+		Shewana3_3952	0.60	-1.9
4,752,355	-		Shewana3_3952	0.68	-1.8
4,752,381	-		Shewana3_3952	0.69	-1.9
4,752,405	+		Shewana3_3952	0.71	-1.7
4,752,441	-		Shewana3_3952	0.74	-2.1
4,752,441	-		Shewana3_3952	0.74	-2.7
4,752,441	-		Shewana3_3952	0.74	-0.3
4,752,441	-		Shewana3_3952	0.74	-1.4
4,752,571	-		Shewana3_3952	0.82	-1.6
4,752,573	+		Shewana3_3952	0.83	-2.8
4,752,631	+		Shewana3_3952	0.87	-1.8
4,752,631	+		Shewana3_3952	0.87	-2.9
4,752,639	-		Shewana3_3952	0.87	-3.6
4,752,860	+				+2.2
4,752,868	-				-0.8
4,753,019	-		Shewana3_3953	0.22	-1.9
4,753,282	-		Shewana3_3953	0.59	-0.9
4,753,282	-		Shewana3_3953	0.59	-1.3
4,753,397	+		Shewana3_3953	0.75	+1.2
4,753,444	+		Shewana3_3953	0.82	+0.3
4,753,444	+		Shewana3_3953	0.82	+1.8
4,753,452	-		Shewana3_3953	0.83	+1.5
4,753,454	-		Shewana3_3953	0.83	-0.4
4,753,626	+				-0.9
4,753,783	-				-0.1
4,753,785	+				-0.4
4,753,793	-				+0.0
4,753,793	-				-1.6