Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3904
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,683,846 | + | +1.2 | |||
4,683,969 | - | Shewana3_3903 | 0.15 | +1.4 | |
4,684,124 | + | Shewana3_3903 | 0.32 | +0.3 | |
4,684,180 | - | Shewana3_3903 | 0.39 | +0.2 | |
4,684,209 | - | Shewana3_3903 | 0.42 | -0.6 | |
4,684,427 | - | Shewana3_3903 | 0.66 | -0.2 | |
4,684,624 | - | Shewana3_3903 | 0.88 | +0.4 | |
4,684,631 | + | Shewana3_3903 | 0.88 | +2.0 | |
4,684,802 | + | -0.2 | |||
4,684,846 | - | Shewana3_3904 | 0.12 | -1.2 | |
4,685,758 | + | argC | Shewana3_3905 | 0.20 | -0.7 |
4,685,822 | - | argC | Shewana3_3905 | 0.26 | +0.5 |
4,685,874 | + | argC | Shewana3_3905 | 0.32 | +0.2 |
4,685,925 | - | argC | Shewana3_3905 | 0.37 | -0.2 |
4,686,022 | + | argC | Shewana3_3905 | 0.47 | +0.0 |
4,686,100 | - | argC | Shewana3_3905 | 0.55 | -0.3 |
4,686,132 | + | argC | Shewana3_3905 | 0.58 | -0.5 |
4,686,363 | - | argC | Shewana3_3905 | 0.82 | -0.3 |
4,686,385 | + | argC | Shewana3_3905 | 0.84 | +1.1 |
4,686,397 | + | argC | Shewana3_3905 | 0.85 | -1.0 |
4,686,442 | + | argC | Shewana3_3905 | 0.90 | -2.4 |
Or see this region's nucleotide sequence