Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3895

Experiment: Paraquat dichloride 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Paraquat dichloride 0.008 mg/ml
4,672,562	-	aroB	Shewana3_3893	0.87	-0.8
4,672,813	-	aroK	Shewana3_3894	0.20	+1.5
4,673,037	-	aroK	Shewana3_3894	0.63	+2.6
4,673,181	-				+1.5
4,673,304	+				+1.2
4,673,352	+				+0.2
4,673,564	-				+0.2
4,673,699	+		Shewana3_3895	0.12	-0.3
4,673,699	+		Shewana3_3895	0.12	+1.1
4,673,699	+		Shewana3_3895	0.12	-1.0
4,673,746	+		Shewana3_3895	0.15	-0.4
4,673,772	+		Shewana3_3895	0.16	-0.5
4,673,772	+		Shewana3_3895	0.16	+0.1
4,673,801	-		Shewana3_3895	0.17	-1.5
4,673,885	-		Shewana3_3895	0.21	+0.1
4,674,074	+		Shewana3_3895	0.31	-0.1
4,674,131	+		Shewana3_3895	0.33	-1.7
4,674,286	-		Shewana3_3895	0.41	-0.0
4,674,327	-		Shewana3_3895	0.43	-0.1
4,674,338	+		Shewana3_3895	0.43	+0.2
4,674,338	+		Shewana3_3895	0.43	+0.1
4,674,366	+		Shewana3_3895	0.45	-0.7
4,674,395	+		Shewana3_3895	0.46	-0.2
4,674,403	-		Shewana3_3895	0.47	-0.1
4,674,403	-		Shewana3_3895	0.47	+0.7
4,674,457	+		Shewana3_3895	0.49	+0.5
4,674,463	+		Shewana3_3895	0.49	+0.0
4,674,528	+		Shewana3_3895	0.53	+0.2
4,674,535	+		Shewana3_3895	0.53	-0.4
4,674,618	-		Shewana3_3895	0.57	+0.2
4,674,637	+		Shewana3_3895	0.58	+0.1
4,674,637	+		Shewana3_3895	0.58	-0.2
4,674,645	-		Shewana3_3895	0.58	+0.2
4,674,682	+		Shewana3_3895	0.60	+0.5
4,674,729	-		Shewana3_3895	0.62	+0.7
4,674,732	-		Shewana3_3895	0.63	-0.3
4,674,739	-		Shewana3_3895	0.63	-0.7
4,674,803	+		Shewana3_3895	0.66	+0.7
4,674,898	+		Shewana3_3895	0.71	-1.3
4,674,904	-		Shewana3_3895	0.71	+0.1
4,674,924	+		Shewana3_3895	0.72	-0.5
4,674,926	-		Shewana3_3895	0.72	-0.4
4,675,128	-		Shewana3_3895	0.82	+0.6
4,675,128	-		Shewana3_3895	0.82	-0.3
4,675,147	+		Shewana3_3895	0.83	+0.4
4,675,158	+		Shewana3_3895	0.83	-0.1
4,675,202	-		Shewana3_3895	0.85	-0.6
4,675,258	+		Shewana3_3895	0.88	-0.9
4,675,258	+		Shewana3_3895	0.88	+0.6
4,675,266	-		Shewana3_3895	0.89	-0.1
4,675,280	-		Shewana3_3895	0.89	+0.8
4,675,294	+		Shewana3_3895	0.90	+0.1
4,675,315	-				+0.1
4,675,364	-				+0.3
4,675,437	-				+0.1
4,675,437	-				-0.2
4,675,505	+				-0.6
4,675,519	-				+0.4
4,675,536	+				+0.2
4,675,544	-				-0.2
4,675,554	+				+0.5
4,675,567	-				+0.6
4,675,647	-		Shewana3_3896	0.24	+0.8
4,675,648	+		Shewana3_3896	0.24	+0.2
4,675,661	-		Shewana3_3896	0.27	-0.0
4,675,676	-		Shewana3_3896	0.30	+0.1
4,675,676	-		Shewana3_3896	0.30	+0.3
4,675,720	+		Shewana3_3896	0.38	-0.7
4,675,728	-		Shewana3_3896	0.40	+0.0
4,675,745	-		Shewana3_3896	0.43	-0.2
4,675,794	+		Shewana3_3896	0.53	+0.0
4,675,804	+		Shewana3_3896	0.55	-0.4
4,675,837	+		Shewana3_3896	0.61	+0.9
4,675,851	+		Shewana3_3896	0.64	+0.6
4,675,859	-		Shewana3_3896	0.65	+0.6
4,675,965	+		Shewana3_3896	0.86	+0.1
4,675,973	-		Shewana3_3896	0.87	-0.4
4,675,973	-		Shewana3_3896	0.87	-0.6
4,675,973	-		Shewana3_3896	0.87	+1.2
4,676,031	-				-0.3
4,676,031	-				-0.2
4,676,098	-				-1.2
4,676,112	-		Shewana3_3897	0.12	-0.1
4,676,112	-		Shewana3_3897	0.12	+1.2
4,676,227	-		Shewana3_3897	0.30	+0.1
4,676,334	+		Shewana3_3897	0.47	-0.7
4,676,334	+		Shewana3_3897	0.47	-0.2
4,676,334	+		Shewana3_3897	0.47	-0.2
4,676,334	+		Shewana3_3897	0.47	+0.4
4,676,334	+		Shewana3_3897	0.47	+0.7
4,676,342	-		Shewana3_3897	0.49	-0.9
4,676,342	-		Shewana3_3897	0.49	+1.0
4,676,342	-		Shewana3_3897	0.49	-1.1
4,676,342	-		Shewana3_3897	0.49	+0.6
4,676,342	-		Shewana3_3897	0.49	+0.2
4,676,431	-		Shewana3_3897	0.63	+0.2
4,676,434	+		Shewana3_3897	0.63	+5.8
4,676,434	+		Shewana3_3897	0.63	-0.4
4,676,434	+		Shewana3_3897	0.63	-0.7
4,676,435	+		Shewana3_3897	0.63	-0.4
4,676,442	-		Shewana3_3897	0.65	+0.7
4,676,442	-		Shewana3_3897	0.65	-1.6
4,676,442	-		Shewana3_3897	0.65	+0.6
4,676,489	-		Shewana3_3897	0.72	+0.1