Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3752

Experiment: Paraquat dichloride 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntShewana3_3750 and mraW are separated by 12 nucleotidesmraW and Shewana3_3752 are separated by 30 nucleotidesShewana3_3752 and Shewana3_3753 are separated by 517 nucleotides Shewana3_3750: Shewana3_3750 - cell division protein FtsL (RefSeq), at 4,508,684 to 4,508,998 _3750 Shewana3_3751: mraW - S-adenosyl-methyltransferase MraW (RefSeq), at 4,509,011 to 4,509,952 mraW Shewana3_3752: Shewana3_3752 - cell division protein MraZ (RefSeq), at 4,509,983 to 4,510,441 _3752 Shewana3_3753: Shewana3_3753 - hypothetical protein (RefSeq), at 4,510,959 to 4,511,663 _3753 Position (kb) 4509 4510 4511Strain fitness (log2 ratio) -1 0 1at 4510.088 kb on - strand, within Shewana3_3752at 4510.595 kb on - strandat 4510.817 kb on + strandat 4511.003 kb on + strandat 4511.061 kb on + strand, within Shewana3_3753at 4511.141 kb on - strand, within Shewana3_3753at 4511.151 kb on - strand, within Shewana3_3753at 4511.297 kb on + strand, within Shewana3_3753at 4511.361 kb on - strand, within Shewana3_3753

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Per-strain Table

Position Strand Gene LocusTag Fraction Paraquat dichloride 0.008 mg/ml
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4,510,088 - Shewana3_3752 0.23 -1.0
4,510,595 - +0.2
4,510,817 + -0.4
4,511,003 + -0.2
4,511,061 + Shewana3_3753 0.14 +0.1
4,511,141 - Shewana3_3753 0.26 -0.8
4,511,151 - Shewana3_3753 0.27 -0.3
4,511,297 + Shewana3_3753 0.48 +0.0
4,511,361 - Shewana3_3753 0.57 +0.2

Or see this region's nucleotide sequence