Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3644
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,378,659 | + | Shewana3_3643 | 0.86 | -1.6 | |
4,378,954 | + | +0.1 | |||
4,378,964 | + | +2.1 | |||
4,378,964 | + | -1.1 | |||
4,379,367 | + | -0.7 | |||
4,379,367 | + | -0.5 | |||
4,379,375 | - | -3.0 | |||
4,379,375 | - | +0.2 | |||
4,379,375 | - | -0.3 | |||
4,379,375 | - | -1.0 | |||
4,379,375 | - | +0.8 | |||
4,379,607 | - | Shewana3_3644 | 0.24 | -2.8 | |
4,379,737 | + | Shewana3_3644 | 0.32 | +0.9 | |
4,380,078 | - | Shewana3_3644 | 0.55 | -1.5 | |
4,380,128 | + | Shewana3_3644 | 0.58 | +1.4 | |
4,380,136 | - | Shewana3_3644 | 0.59 | -1.5 | |
4,380,303 | + | Shewana3_3644 | 0.70 | +1.7 | |
4,380,671 | - | +0.2 | |||
4,380,885 | - | -0.3 | |||
4,381,131 | - | Shewana3_3645 | 0.41 | +0.7 | |
4,381,161 | - | Shewana3_3645 | 0.46 | +0.6 | |
4,381,247 | + | Shewana3_3645 | 0.61 | -1.9 | |
4,381,328 | + | Shewana3_3645 | 0.75 | +1.4 | |
4,381,328 | + | Shewana3_3645 | 0.75 | -1.7 | |
4,381,473 | - | -0.8 |
Or see this region's nucleotide sequence