Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3569
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,280,781 | + | -1.5 | |||
4,281,009 | + | Shewana3_3569 | 0.18 | +0.8 | |
4,281,072 | - | Shewana3_3569 | 0.23 | +0.6 | |
4,281,072 | - | Shewana3_3569 | 0.23 | +0.9 | |
4,281,133 | + | Shewana3_3569 | 0.27 | +1.6 | |
4,281,223 | + | Shewana3_3569 | 0.34 | +0.3 | |
4,281,369 | + | Shewana3_3569 | 0.44 | +2.0 | |
4,281,830 | - | Shewana3_3569 | 0.78 | +0.3 | |
4,281,885 | + | Shewana3_3569 | 0.82 | +1.3 | |
4,281,885 | + | Shewana3_3569 | 0.82 | -0.4 | |
4,281,917 | + | Shewana3_3569 | 0.85 | +1.0 | |
4,281,917 | + | Shewana3_3569 | 0.85 | +1.0 | |
4,282,007 | + | +0.6 | |||
4,282,039 | - | +0.5 | |||
4,282,408 | + | Shewana3_3570 | 0.29 | +0.7 | |
4,282,490 | - | Shewana3_3570 | 0.37 | -0.3 | |
4,282,587 | + | Shewana3_3570 | 0.47 | +7.5 | |
4,282,637 | + | Shewana3_3570 | 0.52 | +8.2 | |
4,282,662 | - | Shewana3_3570 | 0.54 | -0.7 | |
4,282,812 | - | Shewana3_3570 | 0.69 | -0.2 |
Or see this region's nucleotide sequence