Strain Fitness in Shewanella sp. ANA-3 around Shewana3_3493
Experiment: Paraquat dichloride 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,187,823 | + | +0.4 | |||
4,187,908 | + | +0.3 | |||
4,187,916 | - | -0.3 | |||
4,187,956 | + | -0.2 | |||
4,188,035 | + | -2.3 | |||
4,188,044 | - | +1.3 | |||
4,188,171 | + | Shewana3_3492 | 0.12 | -0.6 | |
4,188,208 | - | Shewana3_3492 | 0.21 | -1.3 | |
4,188,221 | - | Shewana3_3492 | 0.24 | -0.2 | |
4,188,329 | + | Shewana3_3492 | 0.52 | -0.2 | |
4,188,433 | + | Shewana3_3492 | 0.79 | +1.3 | |
4,188,433 | + | Shewana3_3492 | 0.79 | +0.5 | |
4,188,456 | - | Shewana3_3492 | 0.85 | -0.8 | |
4,188,603 | - | -0.9 | |||
4,188,614 | + | -0.8 | |||
4,188,623 | - | +0.4 | |||
4,188,727 | - | -0.7 | |||
4,188,751 | + | +1.1 | |||
4,188,990 | + | Shewana3_3493 | 0.80 | +3.7 | |
4,189,263 | - | -0.0 | |||
4,189,265 | + | -0.9 | |||
4,189,301 | + | +1.6 | |||
4,189,314 | - | +0.7 | |||
4,189,390 | + | +1.0 | |||
4,189,390 | + | +1.0 | |||
4,189,570 | - | -0.0 | |||
4,189,570 | - | +0.3 | |||
4,189,828 | + | +3.6 | |||
4,189,913 | - | -0.0 | |||
4,189,950 | + | +2.0 | |||
4,189,958 | + | +2.6 | |||
4,189,958 | - | +1.9 | |||
4,189,966 | - | +0.2 | |||
4,189,966 | - | -0.8 | |||
4,189,966 | - | +0.8 | |||
4,189,966 | - | +1.3 |
Or see this region's nucleotide sequence